G76813


Basic Information

Item Value
gene id G76813
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 4042934 ~ 4043196 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU91199
CAAAGCCCTGCAGAGAGTTGTGCGCTTAGCTGAGCCAATCTCCGGGTCTGGTCTCCCCTCTCTGCACAACATCTACCCCAGGTGATGCACTACAAGAGCTGCTAAAATCATCAGGGGACTCCACCCACCCTGGTAAATGTCTGTTTAGCCTGCTGCAATCAAGCAGGCACTTCCGTATTCTGATGGCTAAAACTGAGAGGCTCAGGAGGAGCCTCTTCCCtcaggccatcagactcctcaacacgagcatgtccaccatacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91199 True 263 lncRNA 0.54 1 4042934 4043196

Neighbor

gene id symbol gene type direction distance location
gypc NA coding downstream 119660 3892480 ~ 3923274 (-)
parp14rs1 LOC108266413 coding downstream 258541 3770234 ~ 3784393 (-)
dnah7 dnah7 coding downstream 297552 3633992 ~ 3745382 (-)
tmeff2a tmeff2,tmeff2a,LOC107670719,LOC107728299 coding downstream 982697 2968680 ~ 3060237 (-)
cavin2a sdpr coding downstream 1082568 2944274 ~ 2960366 (-)
sfrp2 NA coding upstream 246876 4290072 ~ 4294136 (-)
LOC113535176 NA coding upstream 289699 4332895 ~ 4333842 (-)
tmem163a tmem163a,LOC108266155,LOC107725256,LOC108425930,LOC107658221,LOC107684456,LOC107555363 coding upstream 370847 4414043 ~ 4469641 (-)
map3k19 map3k19 coding upstream 462095 4505291 ~ 4515439 (-)
mmadhcb mmadhc coding upstream 605024 4648220 ~ 4655253 (-)
G76796 NA non-coding downstream 35139 4007437 ~ 4007795 (-)
G76794 NA non-coding downstream 37026 4005694 ~ 4005908 (-)
G76688 NA non-coding downstream 74857 3967873 ~ 3968077 (-)
G76682 NA non-coding downstream 104934 3937794 ~ 3938000 (-)
G76658 NA non-coding downstream 190727 3851396 ~ 3852207 (-)
G76845 NA non-coding upstream 199057 4242253 ~ 4242524 (-)
G76852 NA non-coding upstream 222457 4265653 ~ 4270345 (-)
G76858 NA non-coding upstream 240357 4283553 ~ 4284394 (-)
G76860 NA non-coding upstream 242427 4285623 ~ 4285823 (-)
G76899 NA non-coding upstream 315548 4358744 ~ 4361429 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other downstream 226875 3786956 ~ 3816059 (-)
LOC113541352 c6h21orf62 other downstream 1237071 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 1289128 2684508 ~ 2753806 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 1978636 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 2239289 1797982 ~ 1803645 (-)
G77283 NA other upstream 796764 4839960 ~ 4844879 (-)
LOC113534947 NA other upstream 1288388 5331584 ~ 5339633 (-)
LOC117597406 LOC108266244 other upstream 2195759 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 2279847 6323043 ~ 6324680 (-)
G78058 LOC108266211,LOC108266891,LOC108262141,LOC108266899,LOC108266212,LOC108266919,LOC108266892,LOC108262627,LOC108266242,LOC108266894,LOC108266896,LOC108266893,LOC108266912,LOC108266890 other upstream 2485850 6529046 ~ 6615660 (-)

Expression


Co-expression Network