G77283


Basic Information

Item Value
gene id G77283
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 4839960 ~ 4844879 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU91765
tgggaagtctttccactagatgttggagcgtggctgtggggatttgtgatcattcagctacaagagcattagtgagatcaggctgatgttggtgaggaggtctggggttcagtcggtgttccagttcatcccaaaggtgttcagtggggttgaggtcagggctctgtgcaggacactcgagttcttccactccaaccttcacacaccatgtcttcatggagctcgctttgtgcacaggggcatcgtcatgctggaacaggtttgggcctcttagttccagtgaagggaaattgtaatgctacagcatacaaagacattctatacaactgtgtgcttcctgctttgtggcaacagtttgagggaagaaccatatatgggtgtgatggtcaggtgtccacaaacttttggccacatagtgtatgcAAATGTTTTCTACCTGGGAGTTTGCAGTCCATTGATTCAGCCCTTGCTGAAAATCTTTCAGAACTTCATCTCGGTCAATGACAACATAAATGAGTTTAATGGCAGTGGAGGAACGCTGAGACAAGTGGTCATGAAAGCCTTGTAGCATACCAGTAATGGCATCCACATTATTAATACCACCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91765 True 608 TUCP 0.47 2 4839960 4844879

Neighbor

gene id symbol gene type direction distance location
nmi nmi coding downstream 10448 4822232 ~ 4829512 (-)
LOC113535278 rnd3,LOC108266936,LOC103021440,LOC108425951,LOC103141407,LOC106582403,LOC107600972 coding downstream 62488 4768561 ~ 4777472 (-)
mmadhcb mmadhc coding downstream 184707 4648220 ~ 4655253 (-)
map3k19 map3k19 coding downstream 324521 4505291 ~ 4515439 (-)
tmem163a tmem163a,LOC108266155,LOC107725256,LOC108425930,LOC107658221,LOC107684456,LOC107555363 coding downstream 370319 4414043 ~ 4469641 (-)
ubxn4 ubxn4 coding upstream 5760 4850639 ~ 4860350 (-)
epc2 epc2 coding upstream 246430 5091309 ~ 5103522 (-)
acvr2aa LOC108266626,LOC108412453,LOC107709421,LOC107673126 coding upstream 270509 5115388 ~ 5158822 (-)
arhgap15 arhgap15 coding upstream 595602 5440481 ~ 5481975 (-)
LOC113534858 LOC108266244 coding upstream 1380975 6225854 ~ 6243712 (-)
G77130 NA non-coding downstream 201409 4638347 ~ 4638551 (-)
G77107 NA non-coding downstream 234281 4605305 ~ 4605679 (-)
G77040 NA non-coding downstream 346241 4491923 ~ 4493719 (-)
G76899 NA non-coding downstream 478531 4358744 ~ 4361429 (-)
G76860 NA non-coding downstream 554137 4285623 ~ 4285823 (-)
G77291 NA non-coding upstream 8177 4853056 ~ 4879593 (-)
G77364 NA non-coding upstream 157830 5002709 ~ 5055475 (-)
G77366 NA non-coding upstream 164704 5009583 ~ 5010313 (-)
G77372 NA non-coding upstream 180758 5025637 ~ 5042889 (-)
G77381 NA non-coding upstream 205706 5050585 ~ 5059601 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other downstream 1023901 3786956 ~ 3816059 (-)
LOC113541352 c6h21orf62 other downstream 2034097 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 2086154 2684508 ~ 2753806 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 2775662 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 3036315 1797982 ~ 1803645 (-)
LOC113534947 NA other upstream 486705 5331584 ~ 5339633 (-)
LOC117597406 LOC108266244 other upstream 1394076 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 1478164 6323043 ~ 6324680 (-)
G78058 LOC108266211,LOC108266891,LOC108262141,LOC108266899,LOC108266212,LOC108266919,LOC108266892,LOC108262627,LOC108266242,LOC108266894,LOC108266896,LOC108266893,LOC108266912,LOC108266890 other upstream 1684167 6529046 ~ 6615660 (-)
LOC113534870 LOC108266896,LOC108266892,LOC108266899,LOC108266891,LOC108266212,LOC108266894,LOC108266242,LOC108266893,LOC108266890,LOC108262141 other upstream 1697554 6542433 ~ 6545953 (-)

Expression


Co-expression Network