G81634


Basic Information

Item Value
gene id G81634
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 12700250 ~ 12700493 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU96858
TTTTGAAAGCACTAGCATTCAATACTGTTCACTCAAGTCAGCACATCTTGAGCTCAATTAGCACACAATTCCCCATGTGAAAACACTAAGAGTCAAAATTGAACACACATCAATCAGATCCttgaatagatagataaaagGGCCCGAATCAGTTCATTGAGTTTTGGAACAATGGATCCACAGAGAAATGAAGGAATAGGtcgaggagggagaggaggaggaggaggtggaggaacATAATTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96858 True 244 lncRNA 0.41 1 12700250 12700493

Neighbor

gene id symbol gene type direction distance location
LOC113525968 LOC108261035 coding downstream 39109 12657053 ~ 12661141 (-)
col4a1 col4a1 coding downstream 110700 12543779 ~ 12589550 (-)
pdzk1 pdzk1 coding downstream 609736 12085115 ~ 12090514 (-)
st6gal2a st6gal2 coding downstream 650549 12015445 ~ 12049701 (-)
uxs1 uxs1,LOC107688726,LOC107676432,LOC107551074 coding downstream 704584 11966494 ~ 11995666 (-)
sema5ba sema5b,sema5ba,LOC108261041,LOC107661137,LOC107660660 coding upstream 75733 12776226 ~ 12873123 (-)
adcy5 adcy5,LOC107660638,LOC107555914,LOC107661140,LOC107596066 coding upstream 240740 12941233 ~ 13011343 (-)
hacd2 hacd2,LOC107660639,LOC107741899 coding upstream 313032 13013525 ~ 13021552 (-)
LOC113526136 LOC108266238,LOC107741933,LOC106586425,LOC102795313,LOC101468032,LOC100710868 coding upstream 374203 13074696 ~ 13085298 (-)
inhbb inhbb,LOC103026097,LOC107596060,LOC107661134 coding upstream 613499 13313992 ~ 13321538 (-)
G81612 col4a2,LOC108261033 non-coding downstream 44388 12654336 ~ 12655862 (-)
G81520 NA non-coding downstream 265678 12434367 ~ 12434572 (-)
G81413 NA non-coding downstream 403615 12296347 ~ 12296635 (-)
LOC113546902 NA non-coding downstream 490026 12208009 ~ 12210224 (-)
G81243 NA non-coding downstream 584891 12115107 ~ 12115359 (-)
G81802 NA non-coding upstream 220423 12920916 ~ 12923093 (-)
G81932 nifk non-coding upstream 396216 13096709 ~ 13099204 (-)
LOC117597411 NA non-coding upstream 577407 13277900 ~ 13282536 (-)
G81995 NA non-coding upstream 598965 13299458 ~ 13300403 (-)
G82000 NA non-coding upstream 601561 13302054 ~ 13302257 (-)
irs2b irs2 other downstream 192562 12482661 ~ 12507688 (-)
mphosph8 mphosph8,LOC107658258 other downstream 1239925 11450212 ~ 11460325 (-)
LOC113546407 NA other downstream 1397406 11297868 ~ 11302844 (-)
G80656 man1a2,LOC107099294,LOC107395482,LOC101162964 other downstream 1664689 11018279 ~ 11035561 (-)
G80600 NA other downstream 1729093 10969417 ~ 10971157 (-)
hspbap1 hspbap1,LOC108261044,LOC107596081 other upstream 12572 12713065 ~ 12728037 (-)
gli2a gli2,LOC107597558,LOC107661135,LOC107596061,LOC107714335,LOC106586430 other upstream 491221 13191714 ~ 13250548 (-)
si:dkey-67c22.2 LOC108266737,LOC107597485,LOC108426078,LOC107756753,LOC107656780,LOC105016353,LOC106586502 other upstream 1061924 13762417 ~ 13855186 (-)
med14 med14,LOC107756768 other upstream 1838375 14538868 ~ 14553495 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497,LOC107595887 other upstream 2127182 14827675 ~ 14837409 (-)

Expression


Co-expression Network