gli2a (gli2,LOC107597558,LOC107661135,LOC107596061,LOC107714335,LOC106586430)


Basic Information

Item Value
gene id gli2a
gene name gli2,LOC107597558,LOC107661135,LOC107596061,LOC107714335,LOC106586430
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 13191714 ~ 13250548 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU97263
TTGGTTACTGCACAGCACAGCGGCTCAGACTCCGCTCAGAAAACTttttacgcacacacacacactctctcacacacacacgcacacgcacacagagcgCATCTCTTTCACAGGCTGAGTGATTCAAACTTGCGCGATGTGTGCGTGATGGAGTGCAGAAGTTTGAAAGGAAAGACACGCAGATCGAGCTGAAGCACCACGTTGTTCTCTGTGAAACTCCGCGTCCGCGCGCTGAAGACTGAAGAACATGAGTGGATTTTCAGCTCAGCCTGCAAGCGAGACCCTGCGATCTGCTTCTGATCATAGTTAAAGTCAAAGCAAAGTTTGTCCGCGAAGCGAGACTCTATTTTCATCATGGACTCTACGACCAGAACTGCCCAAGAGAAGAAGGAATGCAAGAGTTCAGGCCTGGATGCTAGCAGCTTCTCTGACCTTCCCAAGAAGCCTTCACCTACCACAATGTCACGAGCTCCTCCTCTGTTCCCGACCTTCCACACACCAATCCCAATCGACATGCGCCATCATGAGGGTAGATACCATTATGAGCCACACCCTCTTCATGCCATGCATGGGTAAGTCCATTAAGTATTTGAACATTTACAGGCATCTCCTGAATTAATGGCaaccttcatgaaaatgagcaaaaattaatatattaagtGAATAACACAACCATAGTAATATTCAAGCTTAATCATATGAGAACACTGTATAGTTTTATCaacaacattttacaaaaacatgaaaaaagcaAAGTACTGTAGAAATACACTCCAGAATGGTTTATCAAGAACAGCAGTTCACCTTCAGGATGGGAGATCTTTCTGCTTCCCCTAGTGCTGAGGTGTACCTGAAAGAGAACTTCCACATAGAGAAACATACAAAGGAGAATTGAAAATACAGTGAAAAGTGATAGAGAAAATCCCATTTCCATCAATCCACTATCTCTCCAGCCATAATATTTTATTGCCTTGGACAGTTCTGTGATTCTGGCATGCCATGTACTGAATCCAGGAAAGCTCTGTCAACTGACATAATCTTTCCATTTGTGGGTCTGCTGCACACCCGCTCAGTACATAACCTAAAACAATGGACAAGAAGcatgtataaaaatgattttattaaaatgagctATGTCAGAATCGTTCTCTTAGTTATCTCTTTGTACAGTGTGCCGTTTGTACAAACAGCGATCACACTGTACAATAGCTTATCACTGTACTGGGACACTATTTGCACTGAGCTACTCTTAGCATAAGATCACTGGACAGTAGTTGAACTTGAATATTTGAACTACCATCCACTATTTGTATCTGCatgcactgccactttacttccattcatttttctgttttcacactgtttaaatgtttacactgttgaCAGTGTTGCACTGCACTGTCACTTTAATTCCACTCTAATCTGCTGCTTGTATCTACAATGTTTACAACCCACTACACTTCCACATCACACTCttacactatatatacagtcaggtccagagtttttgtgattttgcctttatacaccaccacaatggatttgaaataaaacaatcaagatgtgattcgaagtgtagactttcagctttattttaagaggttgaacaaaaatatggcatttaccatttaggaattacagccattttcaacaaagtacctccattttcaggggctcacaaaaaccaaatacttccggacctaactatatgtat
>XM_026912514.2
AGATATGGGGAGGGCAAGACTGGAAACAACTCAAACATCTTGGTTACTGCACAGCACAGCGGCTCAGACTCCGCTCAGAAAACTttttacgcacacacacacactctctcacacacacacgcacacgcacacagagcgCATCTCTTTCACAGGCTGAGTGATTCAAACTTGCGCGATGTGTGCGTGATGGAGTGCAGAAGTTTGAAAGGAAAGACACGCAGATCGAGCTGAAGCACCACGTTGTTCTCTGTGAAACTCCGCGTCCGCGCGCTGAAGACTGAAGAACATGAGTGGATTTTCAGCTCAGCCTGCAAGCGAGACCCTGCGATCTGCTTCTGATCATAGTTAAAGTCAAAGCAAAGTTTGTCCGCGAAGCGAGACTCTATTTTCATCATGGACTCTACGACCAGAACTGCCCAAGAGAAGAAGGAATGCAAGAGTTCAGGCCTGGATGCTAGCAGCTTCTCTGACCTTCCCAAGAAGCCTTCACCTACCACAATGTCACGAGCTCCTCCTCTGTTCCCGACCTTCCACACACCAATCCCAATCGACATGCGCCATCATGAGGGTAGATACCATTATGAGCCACACCCTCTTCATGCCATGCATGGCCCTGCTGGATTAACTGGAAGCCCAGTTATCTCTGATATCTCTCTGATCCGGTTGTCCCCTCATGCTGCAGCCACGGGTGAGTCCCCATTCAGCCCACCGCATCCATACGTCAACTCTCACATGGAGCAGTACCTACGCTCAGTTCACAACAGCCCCACGCTGTCCGTCATTTCAGCGGCGCGAGGCCTCAGCCCGGCTGATGTGACACatgagcagctgaaagaacgaGGTCTTTTTggccttcctcctcctcctcctgggACTAACCCAGCCGACTATTATCATCTAATGGCTAATCACCGCAGCCCCTATGGAGAGCTGCTCATGCAGACTGGGGCAGCAGCTGCTGCCGCCACTGTACATCTACCAGACTACATCAGCCCTGTGGACATGTCCCGGTTTCCAAGCCCCAGACTGACACCTAGGCTCAGCCGAAAACGAGCACTGTCCATCTCGCCTATGTCAGACGCCAGCATCGACCTGCAGACCATGATCCGCACCTCTCCCAACTCTCTGGTGGCCTACATCAATAACTCACGCTCCAGCTCCAATGCCAGTAGCTCTTATGGGCACCTCTCAGTCGGGGCTATCAGTCCGTCGTTTACATTCCCCCACCCCATCACTCCTGTGGCATACCAGCAGTTGCTGTCCCAGCACCGAGGGCTTAGTGCGTTTGGCCACACACCTCCCCTAATCCAGCCCTCTCCCTCCTTCATCAACCGCCAGCAGCCCATCGGAACTGCCATAGCCCACAGCACCAGCGGCAGCAACCCCAGCACAGAGGCCAACCAGAATGCAGGAGGAGACTCAGCAGTCAGCAGTACAGTCAATCCCATGATTACCAAGAGGTCAAAGGTGAAGACAGAAGTGGATGGGACATGCCCTATCTCCCCTTGCTCTCAGGATCATGTGGAACTGAGAGAGGAGCTGGATAAGGACGAGTGCAAGCAGGAGCCTGAGGCAGTGTATGAGACCAACTGCCACTGGGAGGGCTGCTCTAAAGAATATGACACACAGGAGCAGTTGGTGCACCACATCAATAATGACCACATCCATGGGGAGAAGAAGGAGTTTGTGTGTCGTTGGGAGGAATGTTCACGAGAGCAGAAGCCTTTTAAAGCCCAGTACATGCTTGTAGTCCACATGCGGCGGCACACGGGAGAGAAGCCTCACAAATGCACATTTGAAGGCTGCTCCAAAGCGTACTCACGACTAGAGAATCTGAAAACCCATCTGAGGTCACATACGGGAGAGAAGCCATACGTATGTGAACATGAAGGCTGCAACAAGGCCTTCTCTAACGCCTCAGACCGAGCCAAGCACCAGAACCGCACACACTCAAATGAGAAACCATATGTTTGCAAGATCCCTGGTTGCACTAAGCGTTACACAGACCCTAGCTCTCTCCGAAAGCATGTGAAGACAGTTCATGGTCCTGAAGCGCATGTCACAAAGAAGCAACGCGGCGATGCTCCTACAAAACCACAACCACCTAAAGGGAGTGGAGAAAATGACGCCAACAGTAAGCATGCTTTGAGAGGATCAGAGGGGTCAACCGAAGCCAGCAGCACCAGTAAAGGTGTGGAGGACAGCCTAAAAGTCAAGTCCATTAAGACTGAGAACACAATGATGTATCAGTCCAGCCCTGGTGGTCAGTCATCATGTAGCAGTGAGCGGTCACCACTTGGTAGCACCACCAACAATGACAGTGGAGTAGAAATGGCCATGCACAGTGGAGGCAGTTTGGGGGACCTGTGTGCTTTGGAAGATCCCCCTGTGGTAGACTCCACAGGTTCTCCAGGAACTTCAGCAGGAGTAGGTCTCCAGCTGCGCAAGAACAGGGGGGTTCTTCTACATCTTGATCATATAAAGAAGGAGAAACTAAAGACAATAAGAGACTCCTGCTCCTGGACAAACTCAACTCCTCAAGTCAGAAACACCAAGCTGCCTCCAATACCAGCTGTCGGTTCTCTGCTGGAAAGTACAAGCTCTCCGAGTGTTGGCACACCAGGGCATTGCTTTGGAGACTTACCCTTGTGTGAAATGACAGTACTGAATCAGCTGAAGGCACGTAGAGATAGCACCACAAGCACTGTGAGCTCAGCCTACACACTCAGCCGCAGATCCTCAGGCATCTCACCCTGCTACTCCAGCCGGCGCTCCAGTGAAGCCTCACAGTTTGGGGGACGCAACAACAACACCAGCTCAGCAGACTCTTACGATCCTATCTCTACTGACCTGTCACGCCGATCTAGTGAAGCCAGTCAGTGTGGTGGAGGTACTTTGCCAAGCCTGCTCAGCCTCACCCCAGCCCAGCATTACCGCTTGAAAGCAAAATATGCAGCAGCCACTGGGGGTGCGCCACCTACACCCCTGCCCAATATGGATCGCATGAGTCTTAGGACTAGGATGGCCTTGTACAATGACTCTCAGGAGAACTCAGCTCATTTATTCCAAGCCCGGACTGTAGCCACCTCAAGGCGCTGCAGTGATATGAGTTATGGAGTCCCTGGTATGATGCCTCATGAAATCCCAAGTAATATGCCAAGGAGAGCTAGTGACCCTGTTCATCGGACAAATATGGATCCTCTCTCCTTGCCTCGTGTTCAGCGCTAcaacagcatgagcagcatgAACCTTTCCCGGGTGCCTCAGGGCGACCATTGTGGTGTTAACCTGCAAAGCAACACCTTTTCTGATGACAGCTTGCATCGTCATGCCTTCAACCAGAGGCCCCCAAGCATCTCAGAGAATGTTGTCATGGAAAACATGGCCATGGATGAAGCTGACCAAACAGAAGAGGACATGGTGCTTCCAGATGACGTAGTGCAATACCTCAGGTCCCAGCATGCTGGCTCAACTCAGGACACTGGTATGGCCTACAACGGTGGTcaaccacaggttttcaaaagCAATCTGACCTCCCAGCAACACCAGCAGCGACGCATGGCCTTGGTTGATGCTAACATGAATCACATAGAGCAAATAATGCCCCCCTGCCAAATCAGCCCAGGGTCCCAGCAGCCTTTCCCAGCCTCTGACAGTGTGAATAAGAATCACATGCCTGTACAATGGAATGAAGTCAGCTCAGGTACAGTGGACAATATAGTGGACAACACAGCAAGATTTCCAAAGCAGCAGCTCCTCAGAGGCAACTTGGCACTGGTCCAGCAAAAGCAGAACACTGGCCCTTATCAAAGCTTTGGGTCAAATCAACAGTCTGCACCAATCAACCAGAATTTGGCTGTTCCACAGCAGGGTTACTCACAGAGGAACACTCAGAGAACAAACCCCATTCAGCACTATAGACAGTCATATGTCAACCCCTGTCAGAACCTCAAAGAGCAAATGAAGGCACACCCAGGTTATAAACAGGAAATCAACCATAATCTATCATCAGGAAACACCTACCAGGGTCCAGTACGCAATAGCATGGCTCTGCAAAATCAAGAAATGCAGAATTACAAGTCTGGCTACTTGCACCTGGAAAACCAGCAGAATTATATGCCATTGCCCCAAACAGCCCTTCAAAATGTCAGCAGAGTTTTTCAGCCTAGGCCTCCACCTGAACCAAAACCATCAAACAGGCATCATGCATGTTCAGGTTTGCCCTATCAAGCTGGTTACTCTCTGTCCAGTACAAGTTCTGATTTTAACACTTCTGAGGCCAGCCCAAAGAGACCTGCTGGAACTACTCATCTCTCCAGTGGAAATGACACTGTGTGCTATTCAGGTGAGATCAAATTGTTAGACAGCAACACAGACTATAACTCCCCAGTGTCACCTTCTGCCAGTCAAGCTGATTATACTACAGTGGCTACGATGACATCCCCTGGAATCAACCAGGTTACCAGCACAGTGGACTCTACTCAAACTGCTGAACACACTCAAATAGACTTTGATACCATGTTGGATGACGGAGATCATTCCAGCCTCATGTCTGGCACACTGAGCCCTGGACTCCTGCAGAGTCTTTCACAGAGTTCCTCACGACTCACTACTCCGCGTAACTCTGTCACACTGGCCTCAGTGCCAGCAGGTATCAGCAACATGGCTATTGGTGATATGAGCTCTATGTTAACTGCCCTTGCAGAAGAAAGTAAATTCCTAAACCTGATGGCTTGAGGATTAATGCATTACAGCTTTTGAACACTGAGAAAGACATTTAGCAGGCTGTGTTTGGCGATCGTTCTACCTTTTGTACACATTGTATGAATGACACTATAGATATATGTGACACAACAGACACTTATGTCCAATGTGGAtcaaaatatgtacatatatttttaatgagaTAAAAGCACTGATATATTACAGTGAAATTTACAGAAGTTTAGGTCAGCATTACCAAATGCCTGCATTATAATTGGAATGGACTCGGATATGCAATCAGACTCAAAGAACTGCAAAGATCTCAAGATGGCATATATCCAAGTCAGAAAGCCATATGTTTCACTTATAATGAACCATTTAAAAGCTGTCCAGGGTAAAGGTCTCAGGCCAGCTTTGGATAAATCAAAATTTCCCTTCCTCAGCAGTGCACTTAGTAGGAGTTCACTAAGtgccttcaaaaaaaaaaaaaaaaaaaaaaaaatacaca
>XM_034304676.1
AGATATGGGGAGGGCAAGACTGGAAACAACTCAAACATCTTGGTTACTGCACAGCACAGCGGCTCAGACTCCGCTCAGAAAACTttttacgcacacacacacactctctcacacacacacgcacacgcacacagagcgCATCTCTTTCACAGGCTGAGTGATTCAAACTTGCGCGATGTGTGCGTGATGGAGTGCAGAAGTTTGAAAGGAAAGACACGCAGATCGAGCTGAAGCACCACGTTGTTCTCTGTGAAACTCCGCGTCCGCGCGCTGAAGACTGAAGAACATGAGTGGATTTTCAGCTCAGCCTGCAAGCGAGACCCTGCGATCTGCTTCTGATCATAGTTAAAGTCAAAGCAAAGTTTGTCCGCGAAGCGAGACTCTATTTTCATCATGGACTCTACGACCAGAACTGCCCAAGAGAAGAAGGAATGCAAGAGTTCAGGCCTGGATGCTAGCAGCTTCTCTGACCTTCCCAAGAAGCCTTCACCTACCACAATGTCACGAGCTCCTCCTCTGTTCCCGACCTTCCACACACCAATCCCAATCGACATGCGCCATCATGAGGGTAGATACCATTATGAGCCACACCCTCTTCATGCCATGCATGGCCCTGCTGGATTAACTGGAAGCCCAGTTATCTCTGATATCTCTCTGATCCGGTTGTCCCCTCATGCTGCAGCCACGGTGACACatgagcagctgaaagaacgaGGTCTTTTTggccttcctcctcctcctcctgggACTAACCCAGCCGACTATTATCATCTAATGGCTAATCACCGCAGCCCCTATGGAGAGCTGCTCATGCAGACTGGGGCAGCAGCTGCTGCCGCCACTGTACATCTACCAGACTACATCAGCCCTGTGGACATGTCCCGGTTTCCAAGCCCCAGACTGACACCTAGGCTCAGCCGAAAACGAGCACTGTCCATCTCGCCTATGTCAGACGCCAGCATCGACCTGCAGACCATGATCCGCACCTCTCCCAACTCTCTGGTGGCCTACATCAATAACTCACGCTCCAGCTCCAATGCCAGTAGCTCTTATGGGCACCTCTCAGTCGGGGCTATCAGTCCGTCGTTTACATTCCCCCACCCCATCACTCCTGTGGCATACCAGCAGTTGCTGTCCCAGCACCGAGGGCTTAGTGCGTTTGGCCACACACCTCCCCTAATCCAGCCCTCTCCCTCCTTCATCAACCGCCAGCAGCCCATCGGAACTGCCATAGCCCACAGCACCAGCGGCAGCAACCCCAGCACAGAGGCCAACCAGAATGCAGGAGGAGACTCAGCAGTCAGCAGTACAGTCAATCCCATGATTACCAAGAGGTCAAAGGTGAAGACAGAAGTGGATGGGACATGCCCTATCTCCCCTTGCTCTCAGGATCATGTGGAACTGAGAGAGGAGCTGGATAAGGACGAGTGCAAGCAGGAGCCTGAGGCAGTGTATGAGACCAACTGCCACTGGGAGGGCTGCTCTAAAGAATATGACACACAGGAGCAGTTGGTGCACCACATCAATAATGACCACATCCATGGGGAGAAGAAGGAGTTTGTGTGTCGTTGGGAGGAATGTTCACGAGAGCAGAAGCCTTTTAAAGCCCAGTACATGCTTGTAGTCCACATGCGGCGGCACACGGGAGAGAAGCCTCACAAATGCACATTTGAAGGCTGCTCCAAAGCGTACTCACGACTAGAGAATCTGAAAACCCATCTGAGGTCACATACGGGAGAGAAGCCATACGTATGTGAACATGAAGGCTGCAACAAGGCCTTCTCTAACGCCTCAGACCGAGCCAAGCACCAGAACCGCACACACTCAAATGAGAAACCATATGTTTGCAAGATCCCTGGTTGCACTAAGCGTTACACAGACCCTAGCTCTCTCCGAAAGCATGTGAAGACAGTTCATGGTCCTGAAGCGCATGTCACAAAGAAGCAACGCGGCGATGCTCCTACAAAACCACAACCACCTAAAGGGAGTGGAGAAAATGACGCCAACAGTAAGCATGCTTTGAGAGGATCAGAGGGGTCAACCGAAGCCAGCAGCACCAGTAAAGGTGTGGAGGACAGCCTAAAAGTCAAGTCCATTAAGACTGAGAACACAATGATGTATCAGTCCAGCCCTGGTGGTCAGTCATCATGTAGCAGTGAGCGGTCACCACTTGGTAGCACCACCAACAATGACAGTGGAGTAGAAATGGCCATGCACAGTGGAGGCAGTTTGGGGGACCTGTGTGCTTTGGAAGATCCCCCTGTGGTAGACTCCACAGGTTCTCCAGGAACTTCAGCAGGAGTAGGTCTCCAGCTGCGCAAGAACAGGGGGGTTCTTCTACATCTTGATCATATAAAGAAGGAGAAACTAAAGACAATAAGAGACTCCTGCTCCTGGACAAACTCAACTCCTCAAGTCAGAAACACCAAGCTGCCTCCAATACCAGCTGTCGGTTCTCTGCTGGAAAGTACAAGCTCTCCGAGTGTTGGCACACCAGGGCATTGCTTTGGAGACTTACCCTTGTGTGAAATGACAGTACTGAATCAGCTGAAGGCACGTAGAGATAGCACCACAAGCACTGTGAGCTCAGCCTACACACTCAGCCGCAGATCCTCAGGCATCTCACCCTGCTACTCCAGCCGGCGCTCCAGTGAAGCCTCACAGTTTGGGGGACGCAACAACAACACCAGCTCAGCAGACTCTTACGATCCTATCTCTACTGACCTGTCACGCCGATCTAGTGAAGCCAGTCAGTGTGGTGGAGGTACTTTGCCAAGCCTGCTCAGCCTCACCCCAGCCCAGCATTACCGCTTGAAAGCAAAATATGCAGCAGCCACTGGGGGTGCGCCACCTACACCCCTGCCCAATATGGATCGCATGAGTCTTAGGACTAGGATGGCCTTGTACAATGACTCTCAGGAGAACTCAGCTCATTTATTCCAAGCCCGGACTGTAGCCACCTCAAGGCGCTGCAGTGATATGAGTTATGGAGTCCCTGGTATGATGCCTCATGAAATCCCAAGTAATATGCCAAGGAGAGCTAGTGACCCTGTTCATCGGACAAATATGGATCCTCTCTCCTTGCCTCGTGTTCAGCGCTAcaacagcatgagcagcatgAACCTTTCCCGGGTGCCTCAGGGCGACCATTGTGGTGTTAACCTGCAAAGCAACACCTTTTCTGATGACAGCTTGCATCGTCATGCCTTCAACCAGAGGCCCCCAAGCATCTCAGAGAATGTTGTCATGGAAAACATGGCCATGGATGAAGCTGACCAAACAGAAGAGGACATGGTGCTTCCAGATGACGTAGTGCAATACCTCAGGTCCCAGCATGCTGGCTCAACTCAGGACACTGGTATGGCCTACAACGGTGGTcaaccacaggttttcaaaagCAATCTGACCTCCCAGCAACACCAGCAGCGACGCATGGCCTTGGTTGATGCTAACATGAATCACATAGAGCAAATAATGCCCCCCTGCCAAATCAGCCCAGGGTCCCAGCAGCCTTTCCCAGCCTCTGACAGTGTGAATAAGAATCACATGCCTGTACAATGGAATGAAGTCAGCTCAGGTACAGTGGACAATATAGTGGACAACACAGCAAGATTTCCAAAGCAGCAGCTCCTCAGAGGCAACTTGGCACTGGTCCAGCAAAAGCAGAACACTGGCCCTTATCAAAGCTTTGGGTCAAATCAACAGTCTGCACCAATCAACCAGAATTTGGCTGTTCCACAGCAGGGTTACTCACAGAGGAACACTCAGAGAACAAACCCCATTCAGCACTATAGACAGTCATATGTCAACCCCTGTCAGAACCTCAAAGAGCAAATGAAGGCACACCCAGGTTATAAACAGGAAATCAACCATAATCTATCATCAGGAAACACCTACCAGGGTCCAGTACGCAATAGCATGGCTCTGCAAAATCAAGAAATGCAGAATTACAAGTCTGGCTACTTGCACCTGGAAAACCAGCAGAATTATATGCCATTGCCCCAAACAGCCCTTCAAAATGTCAGCAGAGTTTTTCAGCCTAGGCCTCCACCTGAACCAAAACCATCAAACAGGCATCATGCATGTTCAGGTTTGCCCTATCAAGCTGGTTACTCTCTGTCCAGTACAAGTTCTGATTTTAACACTTCTGAGGCCAGCCCAAAGAGACCTGCTGGAACTACTCATCTCTCCAGTGGAAATGACACTGTGTGCTATTCAGGTGAGATCAAATTGTTAGACAGCAACACAGACTATAACTCCCCAGTGTCACCTTCTGCCAGTCAAGCTGATTATACTACAGTGGCTACGATGACATCCCCTGGAATCAACCAGGTTACCAGCACAGTGGACTCTACTCAAACTGCTGAACACACTCAAATAGACTTTGATACCATGTTGGATGACGGAGATCATTCCAGCCTCATGTCTGGCACACTGAGCCCTGGACTCCTGCAGAGTCTTTCACAGAGTTCCTCACGACTCACTACTCCGCGTAACTCTGTCACACTGGCCTCAGTGCCAGCAGGTATCAGCAACATGGCTATTGGTGATATGAGCTCTATGTTAACTGCCCTTGCAGAAGAAAGTAAATTCCTAAACCTGATGGCTTGAGGATTAATGCATTACAGCTTTTGAACACTGAGAAAGACATTTAGCAGGCTGTGTTTGGCGATCGTTCTACCTTTTGTACACATTGTATGAATGACACTATAGATATATGTGACACAACAGACACTTATGTCCAATGTGGAtcaaaatatgtacatatatttttaatgagaTAAAAGCACTGATATATTACAGTGAAATTTACAGAAGTTTAGGTCAGCATTACCAAATGCCTGCATTATAATTGGAATGGACTCGGATATGCAATCAGACTCAAAGAACTGCAAAGATCTCAAGATGGCATATATCCAAGTCAGAAAGCCATATGTTTCACTTATAATGAACCATTTAAAAGCTGTCCAGGGTAAAGGTCTCAGGCCAGCTTTGGATAAATCAAAATTTCCCTTCCTCAGCAGTGCACTTAGTAGGAGTTCACTAAGtgccttcaaaaaaaaaaaaaaaaaaaaaaaaatacaca

Function

symbol description
gli2 Enables several functions, including DNA-binding transcription factor activity; promoter-specific chromatin binding activity; and zinc ion binding activity. Involved in several processes, including hair follicle morphogenesis; osteoblast differentiation; and regulation of cellular macromolecule biosynthetic process. Located in nucleolus and nucleoplasm. Implicated in Culler-Jones syndrome; holoprosencephaly 9; and spina bifida. Biomarker of biliary atresia.

NR:

description
PREDICTED: zinc finger protein GLI2-like

GO:

id name namespace
GO:0021523 somatic motor neuron differentiation biological_process
GO:0042694 muscle cell fate specification biological_process
GO:0032835 glomerulus development biological_process
GO:0001756 somitogenesis biological_process
GO:0007517 muscle organ development biological_process
GO:0031290 retinal ganglion cell axon guidance biological_process
GO:0055002 striated muscle cell development biological_process
GO:0031018 endocrine pancreas development biological_process
GO:0042476 odontogenesis biological_process
GO:0048557 embryonic digestive tract morphogenesis biological_process
GO:0021634 optic nerve formation biological_process
GO:0048855 adenohypophysis morphogenesis biological_process
GO:0048618 post-embryonic foregut morphogenesis biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0050767 regulation of neurogenesis biological_process
GO:0008015 blood circulation biological_process
GO:0070935 3'-UTR-mediated mRNA stabilization biological_process
GO:0008045 motor neuron axon guidance biological_process
GO:0021508 floor plate formation biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K16798 GLI2; zinc finger protein GLI2

RNA

RNA id representative length rna type GC content exon number start site end site
TU97263 False 1714 lncRNA 0.41 3 13215370 13250509
XM_026912514.2 True 5212 mRNA 0.50 14 13191714 13250548
XM_034304676.1 False 5086 mRNA 0.49 14 13191714 13250548

Neighbor

gene id symbol gene type direction distance location
LOC113526136 LOC108266238,LOC107741933,LOC106586425,LOC102795313,LOC101468032,LOC100710868 coding downstream 106416 13074696 ~ 13085298 (-)
hacd2 hacd2,LOC107660639,LOC107741899 coding downstream 170162 13013525 ~ 13021552 (-)
adcy5 adcy5,LOC107660638,LOC107555914,LOC107661140,LOC107596066 coding downstream 180371 12941233 ~ 13011343 (-)
sema5ba sema5b,sema5ba,LOC108261041,LOC107661137,LOC107660660 coding downstream 318591 12776226 ~ 12873123 (-)
LOC113525968 LOC108261035 coding downstream 530573 12657053 ~ 12661141 (-)
inhbb inhbb,LOC103026097,LOC107596060,LOC107661134 coding upstream 63444 13313992 ~ 13321538 (-)
si:dkey-3d4.3 LOC108266678 coding upstream 72082 13322630 ~ 13330891 (-)
lrp1bb lrp1b,LOC107660661,LOC107661145,LOC107746259 coding upstream 200644 13451192 ~ 13715233 (-)
atp1a1b atp1a1,atp1a1b,LOC107656784,LOC107569141,LOC107756749 coding upstream 547489 13798037 ~ 13809445 (-)
mab21l3 mab21l3,LOC107597583,LOC107756750,LOC107748187 coding upstream 571380 13821928 ~ 13828093 (-)
G81932 nifk non-coding downstream 92510 13096709 ~ 13099204 (-)
G81802 NA non-coding downstream 268621 12920916 ~ 12923093 (-)
G81634 NA non-coding downstream 491221 12700250 ~ 12700493 (-)
G81612 col4a2,LOC108261033 non-coding downstream 535852 12654336 ~ 12655862 (-)
G81520 NA non-coding downstream 757142 12434367 ~ 12434572 (-)
LOC117597411 NA non-coding upstream 27352 13277900 ~ 13282536 (-)
G81995 NA non-coding upstream 48910 13299458 ~ 13300403 (-)
G82000 NA non-coding upstream 51506 13302054 ~ 13302257 (-)
G82012 NA non-coding upstream 56979 13307527 ~ 13307726 (-)
G82035 NA non-coding upstream 81742 13332290 ~ 13332503 (-)
hspbap1 hspbap1,LOC108261044,LOC107596081 other downstream 463677 12713065 ~ 12728037 (-)
irs2b irs2 other downstream 684026 12482661 ~ 12507688 (-)
mphosph8 mphosph8,LOC107658258 other downstream 1731389 11450212 ~ 11460325 (-)
LOC113546407 NA other downstream 1888870 11297868 ~ 11302844 (-)
G80656 man1a2,LOC107099294,LOC107395482,LOC101162964 other downstream 2156153 11018279 ~ 11035561 (-)
si:dkey-67c22.2 LOC108266737,LOC107597485,LOC108426078,LOC107756753,LOC107656780,LOC105016353,LOC106586502 other upstream 511869 13762417 ~ 13855186 (-)
med14 med14,LOC107756768 other upstream 1288320 14538868 ~ 14553495 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497,LOC107595887 other upstream 1577127 14827675 ~ 14837409 (-)
dcaf6 dcaf6 other upstream 1799335 15049883 ~ 15077216 (-)
LOC117597380 NA other upstream 1856401 15106949 ~ 15114695 (-)

Expression


Co-expression Network