G83474


Basic Information

Item Value
gene id G83474
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 16072840 ~ 16073071 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU99103
GGACACTTGAGCCCTATGAGGCGATTGTAAGTCACTTCTGTTAACACTTAAGGTTATTTACACTTGACTTAACAAGGTGACCActtaataattacttttgaatggACTACATTCCTATGTGGATTATAATTGTTGGATGGGCTCAGAATTTTTCTCAGGATTATATCTTCTAACTACAAAgtgagcatgtttttttttttttccccagaatcATTATCACTGCATGTTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99103 True 232 lncRNA 0.34 1 16072840 16073071

Neighbor

gene id symbol gene type direction distance location
acod1 acod1 coding downstream 48496 16016189 ~ 16024344 (-)
zgc:152951 LOC108266837,LOC108424411,LOC103461279,LOC105936156,LOC103141471,LOC106938088,LOC106905368,LOC105893400 coding downstream 63016 15999677 ~ 16009824 (-)
vgll3 vgll3 coding downstream 124499 15945570 ~ 15948341 (-)
kctd4 kctd4,LOC107688678,LOC107713709,LOC107748885 coding downstream 164409 15906927 ~ 15908431 (-)
tsc22d1 tsc22d1,LOC107713726,LOC107551985,LOC107688650,LOC108266727 coding downstream 179868 15864043 ~ 15892972 (-)
uchl3 uchl3,LOC107658267,LOC107668893,LOC107568837 coding upstream 6491 16079562 ~ 16085068 (-)
LOC113525961 LOC108424292,LOC108266955,LOC103034814,LOC105899367,LOC107705174,LOC106586357 coding upstream 25682 16098753 ~ 16099552 (-)
neb neb,LOC107725229,LOC107658288 coding upstream 220821 16293892 ~ 16349242 (-)
arl5a arl5a,LOC107555355 coding upstream 280072 16353143 ~ 16362904 (-)
kcnj3a kcnj3 coding upstream 356861 16429932 ~ 16457212 (-)
G83473 NA non-coding downstream 156 16072397 ~ 16072684 (-)
G83457 NA non-coding downstream 42097 16030534 ~ 16030743 (-)
G83456 NA non-coding downstream 46651 16025382 ~ 16026189 (-)
G83446 NA non-coding downstream 60633 16009956 ~ 16012207 (-)
G83309 NA non-coding downstream 132784 15939499 ~ 15940056 (-)
LOC117597324 NA non-coding upstream 151270 16224341 ~ 16228437 (-)
G83614 NA non-coding upstream 336357 16409428 ~ 16409893 (-)
G83953 NA non-coding upstream 892440 16965511 ~ 16966173 (-)
G84061 NA non-coding upstream 1054239 17127310 ~ 17128680 (-)
G84177 NA non-coding upstream 1234498 17307569 ~ 17311955 (-)
pou1f1 pou1f1,LOC107688653,LOC107661330,LOC107561319 other downstream 98926 15943740 ~ 15973914 (-)
LOC117597380 NA other downstream 958145 15106949 ~ 15114695 (-)
dcaf6 dcaf6 other downstream 995624 15049883 ~ 15077216 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497,LOC107595887 other downstream 1235431 14827675 ~ 14837409 (-)
med14 med14,LOC107756768 other downstream 1519345 14538868 ~ 14553495 (-)
G83554 NA other upstream 146893 16219964 ~ 16220866 (-)
si:dkey-91i10.2 LOC108266132,LOC106530433,LOC107658202 other upstream 297156 16370227 ~ 16406478 (-)
mettl8 mettl8 other upstream 955166 17028237 ~ 17039843 (-)
sp3a sp3 other upstream 1298908 17371979 ~ 17381172 (-)
evx2 evx2,LOC107657379,LOC107671304 other upstream 1622219 17695290 ~ 17699980 (-)

Expression


Co-expression Network