G83614


Basic Information

Item Value
gene id G83614
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 16409428 ~ 16409893 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU99271
GAgagtggttatatttacaaactATTTACAGTAAGACAGAAAAGGACACCAAAGGGGAAAAAGGGACGCGAGcggcaccaaagcaaagaaatgaacaaaacaaaacaagtctacCTATTTAGCCCTCTAACCTAACTACAAACAAAGATAGAAAGTAAATCTTCAGCGTCCAGGACGCTCTAACTACCTACACTAACTagccaaaccaaaagtacagagggtggtgctcgctcctaacctaGTGTGTCTAATACAAAACGGACCTCCTGCGTGCTGCACCatgtatgtcacgtgacgtacttacctgtccccttttccccaacactaacaAAGTCACAACTAgggtaacaaacaacaaattaaccATACAAACACGTGACTAGCACAAAGCGGGGAAACATGGAACAAATGACATACAAGGACaaacacagtaaggcagcgtaactttacacagaacaaacagaga

Function

GO:

id name namespace
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99271 True 466 lncRNA 0.42 1 16409428 16409893

Neighbor

gene id symbol gene type direction distance location
arl5a arl5a,LOC107555355 coding downstream 46524 16353143 ~ 16362904 (-)
neb neb,LOC107725229,LOC107658288 coding downstream 60186 16293892 ~ 16349242 (-)
LOC113525961 LOC108424292,LOC108266955,LOC103034814,LOC105899367,LOC107705174,LOC106586357 coding downstream 309876 16098753 ~ 16099552 (-)
uchl3 uchl3,LOC107658267,LOC107668893,LOC107568837 coding downstream 324360 16079562 ~ 16085068 (-)
acod1 acod1 coding downstream 385084 16016189 ~ 16024344 (-)
kcnj3a kcnj3 coding upstream 20039 16429932 ~ 16457212 (-)
galnt13 galnt13 coding upstream 62166 16472059 ~ 16516287 (-)
fmnl2a fmnl2 coding upstream 152781 16562674 ~ 16614183 (-)
mylka LOC108266375,LOC108424386,LOC107559533 coding upstream 207678 16617571 ~ 16675267 (-)
tlk1a tlk1 coding upstream 592225 17002118 ~ 17025530 (-)
LOC117597324 NA non-coding downstream 180991 16224341 ~ 16228437 (-)
G83474 NA non-coding downstream 336357 16072840 ~ 16073071 (-)
G83473 NA non-coding downstream 336744 16072397 ~ 16072684 (-)
G83457 NA non-coding downstream 378685 16030534 ~ 16030743 (-)
G83456 NA non-coding downstream 383239 16025382 ~ 16026189 (-)
G83953 NA non-coding upstream 555618 16965511 ~ 16966173 (-)
G84061 NA non-coding upstream 717417 17127310 ~ 17128680 (-)
G84177 NA non-coding upstream 897676 17307569 ~ 17311955 (-)
G84182 NA non-coding upstream 914152 17324045 ~ 17324878 (-)
G84189 LOC108266646 non-coding upstream 922599 17332492 ~ 17346350 (-)
si:dkey-91i10.2 LOC108266132,LOC106530433,LOC107658202 other downstream 2950 16370227 ~ 16406478 (-)
G83554 NA other downstream 188562 16219964 ~ 16220866 (-)
lmo7a lmo7 other downstream 332808 16043283 ~ 16076620 (-)
pou1f1 pou1f1,LOC107688653,LOC107661330,LOC107561319 other downstream 435514 15943740 ~ 15973914 (-)
LOC117597380 NA other downstream 1294733 15106949 ~ 15114695 (-)
mettl8 mettl8 other upstream 618344 17028237 ~ 17039843 (-)
sp3a sp3 other upstream 962086 17371979 ~ 17381172 (-)
evx2 evx2,LOC107657379,LOC107671304 other upstream 1285397 17695290 ~ 17699980 (-)
LOC113526313 baz2b other upstream 2503494 18913387 ~ 18968492 (-)
grb14 grb14 other upstream 3033198 19443091 ~ 19494515 (-)

Expression


Co-expression Network