inhbb (inhbb,LOC103026097,LOC107596060,LOC107661134)


Basic Information

Item Value
gene id inhbb
gene name inhbb,LOC103026097,LOC107596060,LOC107661134
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 13313992 ~ 13321538 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026946245.2
CTGGAGTGTATGGGTCAGCCACAGCTGATGCTGCTCTCGCCTCCACACACACGCTAATCTCCTCCAGCCCACGTGGTTTCacctataaaaaaaagtttccgcGCGAGGCGGCTTTAGTAGCTTGATTGCACAGGGGAAAGGACAGAGAGCACAACCTCGTTTCCGTCACACGCACAGGCTATGCACCCGCTACACCGTCAGGGTTTCCTGCTCTTTTATCATTCCAAGCGGCGACCTGGACGAAGAGAAGCTGCGATCCAAGACAGGACGATATTTCAGCTCGTAGTACTTTTAGTGACTGATTTGTGCAGTCGATCAGCACTCGGACTCTGATTGCACTCTTTCATGGTTCTGGGATGAATTTTGTCATGCCGTCATTAGGAGGAGGATATGACAAGCAGAAGGATGAAATGGGCTGTGTAGGGTTTGCGTGCACTGATCTAGCCTGAAGCTGGGTTTGGATGCTCGAAGTCAAGCCCATCTCTTCTGACCGGAGTCGCTCCATCCTTCACAAAAACCATGACGCACGGAGCTTTCTCTAAGACACCCACTGGAAGTCTGGACTGTCCCTAATTCAGCTCATTCTTAAGTGCGAGCTCACAATAATAACTTTTCAGTTACTTTTATGAACACTATGTTTAAATATCTCATGTGGCTGCACAGCGTCGATTTACCTGGCACGACGGACCTGTGAATGCAAAGTAAACCAGTTACCCAAGGCACCCAGTCTGTTTCCTTAAAGACGATCGCCAGTTGACGCGGTGGGGAGAAGATGAAGGCGATCGTGCGGGTGATGTGTTGTTTAATGGCTTGCGTGCTGTCAGTGCGGGGCGCCGGGAGCGACACGCACGCGCTGCCCCGGGACTCGTGCGCGTCATGCGGCCTCAGCCGTCCGAGCGTCCCAGACGCCATGGACACGGACTTTCTGGAGGCGGTGAAGAGGCACATACTGAGCAGACTGCAGATGAGGCAGAGACCTAACATCACGCACCCGATCCCGAAGGCAGCCATGGTCACGGCACTGAGGAAGCTCCACGCCGGGAAGGTGAGGGAGGACGGGAGGTTCGAGATTCCCAGCTTAGATGGCCAAGCCGCTTACAGCAACGAGGCGCAGGAGGAGACATCAGAAATCATCAGCTTTGCCGAGTCAGATGACCTGAGTTCAGTGAAGTCCAGCTTCTATTTTGTGATCTCCAATGAGGGCAGTCAGAACCTGTATGTGCTGCAGGCCAATCTATGGCTGTACTTCAAACTTCTGCCTGGAGGCATGGAGAAAGGTGTGCGTCGGAAGGTGACAGTGAGGGTGCACTACCAGGAGCCTGGTGGTCAGGAAAAATGGGTTGAGAAGCGCCTGGAGCTGAAGCGCAGTGGCTGGCACACATTCCCACTGTCAGAGGCAGTCAGAATGGCGTTAGGGAAAGGTGGCCGACGGCAGGACTTGGATGTGCACTGCGAGGGCTGTGAGGTAGCCAATGTGGCGCCTGTGCTGGTGGACATAGGTGATCCCTCTCACCGGCCTTTCCTGGTGGTGCGGGCACGCCAGGCTGAGGGGAAACATCGTATCCACAAGCGTGGCCTGGAGTGCGATGGAAATCATGGTGGTCTGTGCTGCAGGCAgcagttctacattgactttagGCTGATAGGCTGGAATGACTGGATCATCGCACCTGCTGGCTACTTTGGCAACTATTGCGAGGGCAGCTGCCCTGCGTATATGGCAGGCGTGCCAGGCTCGGCCTCCTCATTCCACACAGCTGTGGTCAATCAGTACCGCATGCGAGGCATAAGCCCAGGCTCAGTGAACTCCTGCTGCATCCCTACCAAGCTCAGCACCATGTCCATGCTCTACTTTGACGATGAGTACAACATTGTCAAACGGGATGTTCCTAATATGATTGTGGAGGAATGCGGCTGTGCCTGAGGCTGGTTAGGGAATTGTAGACTTTGAATGTAATCAAAGGACATTACAACAGCAGTGACATATTTATGGGCCTGTACCACAGGCATATAAATACATGTTATTATATGTACACTCTAaatgcacaatcacacacctgtgtgtgcgCATGGAGCAGTGGTTCGTCAGATATATAACAGGAGTAATACTGTTACAATctacaaacacaaagacaaTGAAATGAGAAGGGAACAGAAATcaccaaacttttttttctagttGAAAATATGATGTTGACCTTTTTACGCCAGCTGGTTAGAATGGGACATTTACCTGCGACAAGCTGGTATTGCCCACTGCTTTGAGTACTTAGCAACAACCCTTCCAATACTAGCGAAAGCACTGACATTACAACGTCCTTTACACTTCAGAACATCAGCACTTCAAATACAGTGACAAATCATTCCATAGAGGTGGAGTTTTCAATAACTATTTATAACCTCACCTTGTATGTTCCTCAAGGCATTCCCACTACCATGGCTGAAATTTTCTGCGGCATTGTTCCATGTCAAACGGGTAGGCTAAATGAAACTGCTAGTGGCCTCTTGGACAACACTGTAACAAAGTGGCTTTTCCTCACCCTGCGCATGCATAGTCTATGTGGCAGACTGCTGAACCAAGACGTGAGGTCCAACAGGTGAAGTGTGATGTTATAGCTCTTTGGCTGTGAACTTCAGTGGCTCATAAATGCTGTCAGCACCATGTGCTCTGTGGAGGCATTATTACTGACCAGCTGGCAGTACAGCACTTGCAAAAATGCTCTAAATGCACAATTTAAAGCACTTGCCTATTGAAATGCCTTCAAAAGGATTGTCAAGAGGTGCACCTACCCCGATCCTCACTCGGTCCTAGTCACATAAAGTGCCGCATAACCTATGCAATGTATAGTAATCCTGGTCCAGACCAAGTGTTCTGTTCTGCTAATCTTTAACTCTTTATCAAATACTTGAAATGTGATCTTTCGCTTTCTTTCCAAAGCGGATGATTGTTCATATGTTTGCACTGAAAAGTTgcagaaataattaaaagacaaaaaaacaaaatgctatggaaaaaatatttttgtaacagtcaactgaattttgtgaaaatttgTGTGTACCGTATAATGGAACCAAAGAGGCCAATATTTTAGTTATTATAATATGGTGGCAAGGCTATTACAATATTTGTTTATCTTGTTTATCCTTTATAAGAAGCCTAATCACTGTGTCAGGGTGCAACATCACAGATTCCATTTCAGCTCATGATacgtttttattttgtacagcaaacttttcatatttaattctcTCATTTTCTATGTAATGACACTTATTTTTAGCTGTCAGTACAAAGTCAACCAGTTAAACGTCATTTCTGTAcagtttatgtaaaaataaaataagctttcgtaaatattttgtaactttaaaataaattcttacTCTGGA

Function

symbol description
inhbb Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in fin; heart; ovary; and testis. Orthologous to human INHBB (inhibin subunit beta B).

NR:

description
PREDICTED: inhibin beta B chain

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K22687 INHBB; inhibin beta B chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026946245.2 True 3393 mRNA 0.47 2 13313992 13321538

Neighbor

gene id symbol gene type direction distance location
LOC113526136 LOC108266238,LOC107741933,LOC106586425,LOC102795313,LOC101468032,LOC100710868 coding downstream 228694 13074696 ~ 13085298 (-)
hacd2 hacd2,LOC107660639,LOC107741899 coding downstream 292440 13013525 ~ 13021552 (-)
adcy5 adcy5,LOC107660638,LOC107555914,LOC107661140,LOC107596066 coding downstream 302649 12941233 ~ 13011343 (-)
sema5ba sema5b,sema5ba,LOC108261041,LOC107661137,LOC107660660 coding downstream 440869 12776226 ~ 12873123 (-)
LOC113525968 LOC108261035 coding downstream 652851 12657053 ~ 12661141 (-)
si:dkey-3d4.3 LOC108266678 coding upstream 1092 13322630 ~ 13330891 (-)
lrp1bb lrp1b,LOC107660661,LOC107661145,LOC107746259 coding upstream 129654 13451192 ~ 13715233 (-)
atp1a1b atp1a1,atp1a1b,LOC107656784,LOC107569141,LOC107756749 coding upstream 476499 13798037 ~ 13809445 (-)
mab21l3 mab21l3,LOC107597583,LOC107756750,LOC107748187 coding upstream 500390 13821928 ~ 13828093 (-)
LOC117597444 NA coding upstream 510258 13831796 ~ 13832700 (-)
G82012 NA non-coding downstream 6266 13307527 ~ 13307726 (-)
G82000 NA non-coding downstream 11735 13302054 ~ 13302257 (-)
G81995 NA non-coding downstream 13589 13299458 ~ 13300403 (-)
LOC117597411 NA non-coding downstream 31456 13277900 ~ 13282536 (-)
G81932 nifk non-coding downstream 214788 13096709 ~ 13099204 (-)
G82035 NA non-coding upstream 10752 13332290 ~ 13332503 (-)
G82055 NA non-coding upstream 33203 13354741 ~ 13355694 (-)
LOC113523953 NA non-coding upstream 565109 13886647 ~ 13889526 (-)
LOC113526249 NA non-coding upstream 595565 13917103 ~ 13919206 (-)
LOC113526223 NA non-coding upstream 622269 13943807 ~ 13951833 (-)
gli2a gli2,LOC107597558,LOC107661135,LOC107596061,LOC107714335,LOC106586430 other downstream 63444 13191714 ~ 13250548 (-)
hspbap1 hspbap1,LOC108261044,LOC107596081 other downstream 585955 12713065 ~ 12728037 (-)
irs2b irs2 other downstream 806304 12482661 ~ 12507688 (-)
mphosph8 mphosph8,LOC107658258 other downstream 1853667 11450212 ~ 11460325 (-)
LOC113546407 NA other downstream 2011148 11297868 ~ 11302844 (-)
si:dkey-67c22.2 LOC108266737,LOC107597485,LOC108426078,LOC107756753,LOC107656780,LOC105016353,LOC106586502 other upstream 440879 13762417 ~ 13855186 (-)
med14 med14,LOC107756768 other upstream 1217330 14538868 ~ 14553495 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497,LOC107595887 other upstream 1506137 14827675 ~ 14837409 (-)
dcaf6 dcaf6 other upstream 1728345 15049883 ~ 15077216 (-)
LOC117597380 NA other upstream 1785411 15106949 ~ 15114695 (-)

Expression


Co-expression Network