il1rl1


Basic Information

Item Value
gene id il1rl1
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 2666856 ~ 2680900 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034304836.1
TCACTGAGTGCATGTGTACATTTTTGCAGATGACACAGCTAAGGATGATTATTTGCTTCCTGGCTAAACTTGTCATGGCCTCTGCATCGAGGAATTACTCAGCCCAGTGTGAAAGCACTCCGGATGTAACCACTATCCATGTGATACAGGGAGAGGCACTGCGTCATCTCTGCCCCAATTCAGACTGCAATAGCGTGATGAACGATTCGCTGATATTTTGGTTCAAAAATGGAAGTGATGGAATCCAGCCAATCACAATGGAGGAAAATGAGCGGGTCCATTACCATGGTGCTGCCTTATACTTCCTGCCTCTAAGTCTGAATGACACAGGCCTTTACATCACACAATGGTGGTATAATGTGTCTGAATGTGATGAGTTTGAAACTGAAATTGTGGTCTATGAGACATTTCACAAAGATCAACTGTACAAAAACTTCTCAGAGCAAATAAGCATTCTGAAGCTTGACTGTCCAGTGTGGCAAAACATCGGAGAAACCATCACCTGGTACAAGGATTTCCGTCTGATCCCTAACAAGTCTGAAGACATACTTCAAGTTTACCTCCTTGCAAAAGATGCTCAAGGAATCTACACCTGTGTGTGCACGTGGGAGCATCACGGTCAACTTTACAACTCCAGTGGATCCTACCAGCTTCAAAGAAAAGAACATGAAGTGCCTTTTCCTCCAACCTTTCAATGTCCCATCAACAACTCTGTGAATTTTGTGGACCTGGGGATGGAGGTGAAGCTGAACTGCCTGGTGTTCTTTGGTCTCAATATAAGGGATGGTGGGAGAATTGTTTACTGGATGAGAAACAACAGCAGAGTGAAATCGTACGATAGggtggAAAATGGGAGAATACAGTCAAATTTGACGATTAGTCAGGTTTCGGAGAAAGACCTCCAATATGAATATTGTTGCATAGCCATAAGCCCATATAAATGGGACTTTGTATGCATCACTCTCAAGACCAGAAAATCCCTGCGCCCAGTGGTTATGACGTTTTCATGCACGGTCCTGTTCCTTCTGCTGGCTGCTGGGATGGTGAAGTGGGTCACTGTGGATCTGGCCTTGTTTTTCAGAAGCTTCAGAATAATGCAGAGTAAAAGAGATGATGGCAAAGTATATGATGCATATGTGATCTACCAGAAGGATAACACAGATgagaaaacaggaaggaaaGTTGCTCACTTTGTCAACCAAGTTTTGCCAGCTGTACTGGAGGATGCCTGCGGCTTTAAACTCTACATTCATGAGAGAGACAACCTACCTGGTGAAGATTACACTGAGCTTGTTGAGACGAGAATGCAGCTGAGCCGCAGGCTCATAGCTGTGCTGCCTCCAAAAGTCAGTCAACATCAAGGGCTCACACCCTCACTCTGTTATGACTGGCATGTGGGGCTGCACCGGGTGCTGGTCGATCAGGAGCTGAGAGTGATTCTGATTCAACTGGGAGATATGAAGGAGTATTCCCATCTGCCCCTGGGGCTGCAGCATCTCCTCCAGCAGACTCCACCCCTAAGGTGGGATGAGGCGAGTGGCCAAGCGACTTGCCCCAACTCCAGGTTCTGGAAGCAGGTGCGCTACATGATGCCTGTTCCTCCAATCTCCAGCTCTCGTGGTGTTGACTTGTAACTGTTAAGCATACTATAGATGCTTCTATCTGAAATCCTTAGAATTCACATAATACAGGAACATTATC
>XM_034304837.1
atatttttaacaaacatgAAGAAATAGTGAGAGATTAGTGTAAtagcctgtttttttctcctgacCAAACACCCACTCTTGCAGGAAATAAAATTATCACCATTCAATCTAGAAAATATTGGCCTAAAAAGTAAGACGGAAGTGGAGGATATCAGACATCCTGTGGTAAGACATTATCAAAATGACTcaaagcatgtttttggaccTGACAGTAAGAAACTCAGCATTATcaaatagatgtgtgtgtgtttgtagagtgTTATGAGAAGTGGTGAGCATTCGTTGGAACAGAGAAATTCATGACCAAATAAGATGACACAGCTAAGGATGATTATTTGCTTCCTGGCTAAACTTGTCATGGCCTCTGCATCGAGGAATTACTCAGCCCAGTGTGAAAGCACTCCGGATGTAACCACTATCCATGTGATACAGGGAGAGGCACTGCGTCATCTCTGCCCCAATTCAGACTGCAATAGCGTGATGAACGATTCGCTGATATTTTGGTTCAAAAATGGAAGTGATGGAATCCAGCCAATCACAATGGAGGAAAATGAGCGGGTCCATTACCATGGTGCTGCCTTATACTTCCTGCCTCTAAGTCTGAATGACACAGGCCTTTACATCACACAATGGTGGTATAATGTGTCTGAATGTGATGAGTTTGAAACTGAAATTGTGGTCTATGAGACATTTCACAAAGATCAACTGTACAAAAACTTCTCAGAGCAAATAAGCATTCTGAAGCTTGACTGTCCAGTGTGGCAAAACATCGGAGAAACCATCACCTGGTACAAGGATTTCCGTCTGATCCCTAACAAGTCTGAAGACATACTTCAAGTTTACCTCCTTGCAAAAGATGCTCAAGGAATCTACACCTGTGTGTGCACGTGGGAGCATCACGGTCAACTTTACAACTCCAGTGGATCCTACCAGCTTCAAAGAAAAGAACATGAAGTGCCTTTTCCTCCAACCTTTCAATGTCCCATCAACAACTCTGTGAATTTTGTGGACCTGGGGATGGAGGTGAAGCTGAACTGCCTGGTGTTCTTTGGTCTCAATATAAGGGATGGTGGGAGAATTGTTTACTGGATGAGAAACAACAGCAGAGTGAAATCGTACGATAGggtggAAAATGGGAGAATACAGTCAAATTTGACGATTAGTCAGGTTTCGGAGAAAGACCTCCAATATGAATATTGTTGCATAGCCATAAGCCCATATAAATGGGACTTTGTATGCATCACTCTCAAGACCAGAAAATCCCTGCGCCCAGTGGTTATGACGTTTTCATGCACGGTCCTGTTCCTTCTGCTGGCTGCTGGGATGGTGAAGTGGGTCACTGTGGATCTGGCCTTGTTTTTCAGAAGCTTCAGAATAATGCAGAGTAAAAGAGATGATGGCAAAGTATATGATGCATATGTGATCTACCAGAAGGATAACACAGATgagaaaacaggaaggaaaGTTGCTCACTTTGTCAACCAAGTTTTGCCAGCTGTACTGGAGGATGCCTGCGGCTTTAAACTCTACATTCATGAGAGAGACAACCTACCTGGTGAAGATTACACTGAGCTTGTTGAGACGAGAATGCAGCTGAGCCGCAGGCTCATAGCTGTGCTGCCTCCAAAAGTCAGTCAACATCAAGGGCTCACACCCTCACTCTGTTATGACTGGCATGTGGGGCTGCACCGGGTGCTGGTCGATCAGGAGCTGAGAGTGATTCTGATTCAACTGGGAGATATGAAGGAGTATTCCCATCTGCCCCTGGGGCTGCAGCATCTCCTCCAGCAGACTCCACCCCTAAGGTGGGATGAGGCGAGTGGCCAAGCGACTTGCCCCAACTCCAGGTTCTGGAAGCAGGTGCGCTACATGATGCCTGTTCCTCCAATCTCCAGCTCTCGTGGTGTTGACTTGTAACTGTTAAGCATACTATAGATGCTTCTATCTGAAATCCTTAGAATTCACATAATACAGGAACATTATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K05171 IL1RL1, ST2; interleukin 1 receptor-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034304836.1 False 1701 mRNA 0.46 10 2666856 2678131
XM_034304837.1 True 1984 mRNA 0.44 11 2666856 2680900

Neighbor

gene id symbol gene type direction distance location
LOC113540058 LOC108266598,LOC108413855,LOC101471943,LOC107700103,LOC100693874 coding downstream 144471 2481594 ~ 2522385 (-)
LOC113540088 LOC108191725,LOC101885398,LOC107661227 coding downstream 420236 2234810 ~ 2246620 (-)
LOC113546994 LOC108261078 coding downstream 586443 2069547 ~ 2080413 (-)
lims2 LOC108261084,LOC108440488,LOC105898085 coding downstream 668783 1988540 ~ 1998073 (-)
ranbp2 LOC108261082,LOC108440489 coding downstream 680817 1950132 ~ 1986039 (-)
LOC113545737 NA coding upstream 23460 2704360 ~ 2712278 (-)
LOC113545730 LOC108266839 coding upstream 33112 2714012 ~ 2732151 (-)
crfb4 LOC108266840 coding upstream 53284 2734184 ~ 2743220 (-)
LOC113541336 LOC108266841 coding upstream 64436 2745336 ~ 2760206 (-)
LOC113540598 NA coding upstream 79350 2760250 ~ 2772389 (-)
G76325 mink1,LOC108427066 non-coding downstream 107704 2556506 ~ 2559152 (-)
G76333 NA non-coding downstream 135864 2530654 ~ 2530992 (-)
G76093 NA non-coding downstream 215907 2449719 ~ 2450949 (-)
G76060 NA non-coding downstream 365916 2300721 ~ 2300940 (-)
G76057 NA non-coding downstream 392217 2271867 ~ 2274639 (-)
LOC117597440 NA non-coding upstream 212476 2893376 ~ 2897204 (-)
G76400 stk17b non-coding upstream 233500 2914400 ~ 2917047 (-)
G76455 NA non-coding upstream 255181 2936081 ~ 2936563 (-)
G76462 NA non-coding upstream 284366 2965266 ~ 2966533 (-)
G76570 NA non-coding upstream 911918 3592818 ~ 3595411 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 602558 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 863211 1797982 ~ 1803645 (-)
trnar-ucu_7 NA other downstream 992283 1674484 ~ 1674573 (-)
trnat-agu_8 NA other downstream 992671 1674112 ~ 1674185 (-)
trnar-ucu_6 NA other downstream 1004247 1662520 ~ 1662609 (-)
ifngr2 NA other upstream 3608 2684508 ~ 2753806 (-)
LOC113541352 c6h21orf62 other upstream 120106 2801006 ~ 2805863 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other upstream 1106056 3786956 ~ 3816059 (-)
G77283 NA other upstream 2159060 4839960 ~ 4844879 (-)
LOC113534947 NA other upstream 2650684 5331584 ~ 5339633 (-)

Expression


Co-expression Network