G98607


Basic Information

Item Value
gene id G98607
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 12838220 ~ 12838542 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU116922
GTTGAAGATCCTGCTACGCTTAAAATCCGTATCTCCAGTTCTAAGGGAATGTCCTCACAGAATGCCCAAATAGTGTACAGGAAATGGCGGCATATCTGTTGGTTTGAAGTTTTGAAGTAATCCACAACACCTGAGATAGATTCCCTGAGGTTGGGCGAGTGCTGTAGCTGCTCTCGAGTCCGTGATTCCACCAAGGCATAGATCTGCTGTAGAACATTATTTCTCTGCTTACACAAAATGTCCACTATTGCGGTGGCCTCCTGGGCCACCACAACCCGAACGTCCTCCTCCAGGTCCAGCTCCTCCATCTTCATCCATCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116922 True 323 lncRNA 0.49 1 12838220 12838542

Neighbor

gene id symbol gene type direction distance location
bbs2 bbs2,LOC107686271 coding downstream 75581 12748014 ~ 12762639 (-)
b3gnt9 b3gnt9 coding downstream 92593 12742353 ~ 12745627 (-)
foxl1 foxl1,LOC102233982 coding downstream 113693 12721746 ~ 12724527 (-)
zfpm1 zfpm1 coding downstream 157782 12607873 ~ 12680438 (-)
zc3h18 zc3h18,LOC106573693 coding downstream 285959 12524259 ~ 12552261 (-)
psme3ip1 fam192a coding upstream 65491 12904033 ~ 12914246 (-)
si:ch211-212o1.2 tmem189,si:ch211-212o1.2,LOC108264382,LOC107672277,LOC107738740,LOC107740306,LOC107583780,LOC103466733,LOC100695703 coding upstream 110045 12948587 ~ 12984645 (-)
znf423 znf423,si:ch211-216l23.1,LOC107738741,LOC107583782 coding upstream 149803 12988345 ~ 13137217 (-)
lonp2 lonp2,LOC107686284 coding upstream 536317 13374859 ~ 13395693 (-)
il34 NA coding upstream 559733 13398275 ~ 13404730 (-)
G98588 NA non-coding downstream 34612 12802798 ~ 12803608 (-)
G98552 NA non-coding downstream 64013 12763899 ~ 12774207 (-)
G98563 NA non-coding downstream 95996 12738949 ~ 12742224 (-)
G98555 NA non-coding downstream 108727 12728444 ~ 12729493 (-)
G98551 NA non-coding downstream 124263 12712094 ~ 12713957 (-)
G98767 NA non-coding upstream 188916 13027458 ~ 13028597 (-)
G98776 NA non-coding upstream 290658 13129200 ~ 13135173 (-)
G98790 NA non-coding upstream 343801 13182343 ~ 13182550 (-)
LOC117597528 NA non-coding upstream 472853 13311395 ~ 13318008 (-)
G99118 LOC108280567 non-coding upstream 807033 13645575 ~ 13647786 (-)
akip1 LOC108264820 other downstream 414242 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 432939 12396507 ~ 12405281 (-)
admb NA other downstream 492768 12311822 ~ 12345452 (-)
sspn sspn other downstream 960016 11870908 ~ 11878204 (-)
plekhg7 plekhg7,LOC107583891 other downstream 1068234 11752525 ~ 11769986 (-)
G98770 NA other upstream 207281 13045823 ~ 13052311 (-)
c6h15orf39 c4h15orf39 other upstream 712138 13550680 ~ 13562574 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 1497394 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 2508624 15347166 ~ 15357563 (-)
G101178 NA other upstream 5348905 18187447 ~ 18196806 (-)

Expression


Co-expression Network