G98770


Basic Information

Item Value
gene id G98770
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 13045823 ~ 13052311 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU117111
TATTAGTGAATTGAGACAACCTTTTCACCTGTTCTTCCAAtgtcttacttttttttctttttgttattctGTCATAATCCTTGAGAGTCCGGTTTAGGGCTTGTGTCAAGAAGGCTGCTGGGGTTGGGGTTGATCACCCCCTCAGTGTCATGCCACAAAGCCAGTGCCACTTATTATGCCATCTTGGCAAGAGATGCATATAATCATAGTAATAAGACTGATAATATTCCATCCTGTCCACCATCTCGCCCTAAATTATGGAAGGATCGGTTTGGACCCTCTCATTTCCCCCGTGAGTGACAGCAAGGCACTGCTCTGTATTATGATACCTGCTTTACTGAGGACCTGCAAGCTCCAGGAGGACAGCACAGGAAAAGAAGGGAATGGAATTGTGGGTACAGGTTTAAACAGAGATGAAATGAAGAATGAATGCCACACAAAAAAGAGAGTTCAGCTATAAATTTTCATGACATGACTGTTTGAGTGCTTGTTAAATATGGATCATTGTTTATAGTTTAAGCGAGGTTCAGttggtttatatttatttaaatatagcaGATCCCCACTGAGCTTCAAGGTTCTCTGCTAGGCTACCCCCACAaggcgcgtgtgtgtgtgtgtgtgtgtgtgtagacatcACAGACATGCCAGTGCTCAGGTTTTAATTTTAGCTTCCATTTAACGCTGCCCCCCTTGGTGCCTCCCCAAGCATTGTGGCGCACCCTGCTGGTGGGGGGGAGAAGCGTGCATCcaccagtacacacacatacacacactcatagccAAAAACATACACCCGCACTCACATGCTCTCACACCTGCAGGGGGCATCCCGAGGGTCTGCAGCTGCACAGCGGAAAACAATAAAGCCCGCAGAAAAAGGAGCTGTGTTCCTGAGAGACCCCCACACacaaagacagggagagagagagtgagagagaaagagagagagagagattttaagTCAAGCAGCAAACAAAGCAACAAACAACACAGAGCAACTAAAACAATTCATGGAGGATCGGGGCCTACGCTGCTTCCTGTGCTCCGAATTTGACATGCACTTGACATTCCTTGTGATAAGGCGAGATGTTCTGGAGCGTTTCCGTTTTGCTAGGCAGCGCAGCCTCACTGCCTCTGCTCTTTGGTATGTTTGTTCGAGCGTTATAGTCTCCTCAGGGCTCTGCTGTTTTTCTCTAGTTTTCTTATTCTTTGAATGTGTGGGCAGAATGctgaaatgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagaactCAGGTAGCTTTGGTAGGGGTGCACCTGCCCCTCTCTGTTCCCCATCCCAGGTCCGTCCAGGTGTGTCTGATGCAGCTGCTGTGCAGGGGAGGGTGGGACAACTGCACGAGCTGCTCAGGCTCTCCTCCCTCTGCCGAGCTCTGCGAGTTAAttgttaaaaag

Function

NR:

description
PREDICTED: transmembrane 6 superfamily member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117111 True 1445 TUCP 0.48 2 13045823 13052311

Neighbor

gene id symbol gene type direction distance location
si:ch211-212o1.2 tmem189,si:ch211-212o1.2,LOC108264382,LOC107672277,LOC107738740,LOC107740306,LOC107583780,LOC103466733,LOC100695703 coding downstream 61178 12948587 ~ 12984645 (-)
psme3ip1 fam192a coding downstream 131577 12904033 ~ 12914246 (-)
bbs2 bbs2,LOC107686271 coding downstream 283184 12748014 ~ 12762639 (-)
b3gnt9 b3gnt9 coding downstream 300196 12742353 ~ 12745627 (-)
foxl1 foxl1,LOC102233982 coding downstream 321296 12721746 ~ 12724527 (-)
lonp2 lonp2,LOC107686284 coding upstream 322548 13374859 ~ 13395693 (-)
il34 NA coding upstream 345964 13398275 ~ 13404730 (-)
sf3b3 sf3b3 coding upstream 359049 13411360 ~ 13440802 (-)
LOC113534846 NA coding upstream 384590 13436901 ~ 13436975 (-)
aars1 aars,LOC107686288,LOC107738729 coding upstream 423220 13475531 ~ 13491284 (-)
G98767 NA non-coding downstream 17226 13027458 ~ 13028597 (-)
G98607 NA non-coding downstream 207281 12838220 ~ 12838542 (-)
G98588 NA non-coding downstream 242215 12802798 ~ 12803608 (-)
G98552 NA non-coding downstream 271616 12763899 ~ 12774207 (-)
G98563 NA non-coding downstream 303599 12738949 ~ 12742224 (-)
G98776 NA non-coding upstream 76889 13129200 ~ 13135173 (-)
G98790 NA non-coding upstream 130032 13182343 ~ 13182550 (-)
LOC117597528 NA non-coding upstream 259084 13311395 ~ 13318008 (-)
G99118 LOC108280567 non-coding upstream 593264 13645575 ~ 13647786 (-)
G99134 NA non-coding upstream 680640 13732951 ~ 13768470 (-)
akip1 LOC108264820 other downstream 621845 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 640542 12396507 ~ 12405281 (-)
admb NA other downstream 700371 12311822 ~ 12345452 (-)
sspn sspn other downstream 1167619 11870908 ~ 11878204 (-)
plekhg7 plekhg7,LOC107583891 other downstream 1275837 11752525 ~ 11769986 (-)
c6h15orf39 c4h15orf39 other upstream 498369 13550680 ~ 13562574 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 1283625 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 2294855 15347166 ~ 15357563 (-)
G101178 NA other upstream 5135136 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 6927758 19980069 ~ 19980259 (-)

Expression


Co-expression Network