Item | Value |
---|---|
gene id | G98944 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047600.1 |
NCBI id | CM018546.1 |
chromosome length | 31307711 |
location | 13690508 ~ 13690919 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU117307 | True | 412 | lncRNA | 0.42 | 1 | 13690508 | 13690919 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
rab11a | rab11a,LOC105007892,LOC100698633,LOC106591986,LOC103378951,LOC106588008,LOC106562755 | coding | upstream | 38803 | 13645900 ~ 13651705 (+) |
slc24a1 | slc24a1 | coding | upstream | 77715 | 13589003 ~ 13612793 (+) |
hacd3 | hacd3,LOC107738726,LOC107686290,LOC107583769,LOC107672296,LOC107596982 | coding | upstream | 107581 | 13576021 ~ 13582927 (+) |
arih1 | arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 | coding | upstream | 141620 | 13530236 ~ 13548888 (+) |
pllp | NA | coding | upstream | 168077 | 13517575 ~ 13522431 (+) |
map2k1 | map2k1,LOC107583767,LOC107672217,LOC107596971,LOC107686295 | coding | downstream | 77192 | 13768111 ~ 13780277 (+) |
zwilch | zwilch | coding | downstream | 98904 | 13789823 ~ 13801596 (+) |
smad6b | smad6 | coding | downstream | 181256 | 13872175 ~ 13896500 (+) |
iqch | iqch | coding | downstream | 270910 | 13961829 ~ 14027467 (+) |
c6h15orf61 | c4h15orf61,zgc:162898,cunh15orf61,LOC103025902,LOC107738714,LOC107686305,LOC107583911,LOC107718314 | coding | downstream | 295905 | 13986824 ~ 13988185 (+) |
G98943 | megf11,LOC107583869,LOC107672222 | non-coding | upstream | 873 | 13689389 ~ 13689635 (+) |
G98930 | NA | non-coding | upstream | 22507 | 13667788 ~ 13668001 (+) |
G98928 | megf11 | non-coding | upstream | 23153 | 13667127 ~ 13667355 (+) |
G98924 | NA | non-coding | upstream | 31196 | 13658902 ~ 13659312 (+) |
G98923 | megf11 | non-coding | upstream | 32846 | 13657170 ~ 13657662 (+) |
G98945 | NA | non-coding | downstream | 427 | 13691346 ~ 13691568 (+) |
G98960 | NA | non-coding | downstream | 49904 | 13740823 ~ 13784775 (+) |
LOC113534369 | NA | non-coding | downstream | 66934 | 13757853 ~ 13758489 (+) |
LOC113534555 | NA | non-coding | downstream | 146798 | 13837717 ~ 13846145 (+) |
G98996 | NA | non-coding | downstream | 200505 | 13891424 ~ 13924313 (+) |
nlrc5 | nlrc5 | other | upstream | 831974 | 12837299 ~ 12858534 (+) |
uri1 | uri1 | other | upstream | 2500399 | 11151714 ~ 11190109 (+) |
vps9d1 | vps9d1 | other | upstream | 2523706 | 11145154 ~ 11166802 (+) |
hsbp1b | NA | other | upstream | 3105003 | 10581994 ~ 10585505 (+) |
LOC113534705 | NA | other | upstream | 4342073 | 9342734 ~ 9348435 (+) |
G98946 | megf11 | other | downstream | 688 | 13691607 ~ 13715766 (+) |
G98972 | NA | other | downstream | 94176 | 13785095 ~ 13789390 (+) |
smad3b | smad3,LOC108264458,LOC108424035,LOC107740443,LOC107755098 | other | downstream | 241620 | 13932539 ~ 13956351 (+) |
skor1b | skor1 | other | downstream | 344309 | 14035228 ~ 14042452 (+) |
G99341 | synm | other | downstream | 829882 | 14520801 ~ 14524480 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
mexican tetra (Astyanax mexicanus) | G158876 | NA | non-coding | NC_035914.1 | CM008317.1 | 16995117 ~ 16995418 (+) |