G99134


Basic Information

Item Value
gene id G99134
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 13732951 ~ 13768470 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU117536
TGGCCCCGGTTCCGTTAACAGCATTCCCATCCGGAATCGGGTTGAGCTGGATCGGTTCTGGCTTCCTCCGTTTCTGCATGATGATCCTCAGTGATCAGCTATTCCGCAATCAGAACCCTGTGCAGGAGAGCAACACTAACGCGCTGCCGAGAGAGCGCTATTTGATGAGGCATAGACTATGCAGCTTATCACACACCCACTTATAGCTTTTTttttttttttttatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117536 True 227 lncRNA 0.48 2 13732951 13768470

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_10 NA coding downstream 87471 13645409 ~ 13645480 (-)
dennd4a dennd4a coding downstream 89379 13612796 ~ 13643572 (-)
ints14 vwa9,LOC107583765,LOC107596981 coding downstream 143967 13582928 ~ 13588984 (-)
ppcdc ppcdc,LOC107583771,LOC107742893,LOC107686355,LOC107738727,LOC107672202 coding downstream 157134 13571853 ~ 13575817 (-)
arl2bp arl2bp,LOC108264832,LOC107686354 coding downstream 206977 13522151 ~ 13525974 (-)
rpl4 rpl4,LOC107718306 coding upstream 17677 13786147 ~ 13789542 (-)
LOC113534851 NA coding upstream 18308 13786778 ~ 13786848 (-)
LOC113534850 NA coding upstream 18664 13787134 ~ 13787202 (-)
LOC113534844 NA coding upstream 19187 13787657 ~ 13787786 (-)
LOC113534840 NA coding upstream 19632 13788102 ~ 13788199 (-)
G99118 LOC108280567 non-coding downstream 85165 13645575 ~ 13647786 (-)
LOC117597528 NA non-coding downstream 414943 13311395 ~ 13318008 (-)
G98790 NA non-coding downstream 550401 13182343 ~ 13182550 (-)
G98776 NA non-coding downstream 597778 13129200 ~ 13135173 (-)
G98767 NA non-coding downstream 704354 13027458 ~ 13028597 (-)
LOC113534347 NA non-coding upstream 14305 13782775 ~ 13784737 (-)
LOC113534852 NA non-coding upstream 15085 13783555 ~ 13783624 (-)
G99165 NA non-coding upstream 74349 13842819 ~ 13843229 (-)
G99166 NA non-coding upstream 75529 13843999 ~ 13844237 (-)
G99184 LOC101268919,LOC101159109 non-coding upstream 164083 13932553 ~ 13932934 (-)
c6h15orf39 c4h15orf39 other downstream 170377 13550680 ~ 13562574 (-)
G98770 NA other downstream 680640 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 1308973 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 1327670 12396507 ~ 12405281 (-)
admb NA other downstream 1387499 12311822 ~ 12345452 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 567466 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 1578696 15347166 ~ 15357563 (-)
G101178 NA other upstream 4418977 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 6211599 19980069 ~ 19980259 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 6627396 20395866 ~ 20416574 (-)

Expression


Co-expression Network