G99202


Basic Information

Item Value
gene id G99202
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 14035267 ~ 14035541 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU117611
gagaaaagcagctctgagTCTGATATGTAGAGATCTCGCCAGCCACCTCCTTtaagaaatgtgtgtatatttatttattattatgttgtcTTGAGTGGGTTTCTTCTTGTTGTGCTCAGAGTCTGGGAATCCGGCTGCATGGAGTCGCACTGTGCGTGTTTAGAGCGCGTGGCTCTGCATGCTGCACTCCGCGCACAGTGTCCGCGTGCCAGCGCGCGCCGTTCTCACCTAAAGCAGCGGAGATCGCGCGCGCCGGAGATCGACTGACAGCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117611 True 275 lncRNA 0.53 1 14035267 14035541

Neighbor

gene id symbol gene type direction distance location
aagab aagab coding downstream 73881 13956433 ~ 13961386 (-)
snapc5 snapc5,LOC107672220,LOC107596973,LOC107686356,LOC107583772 coding downstream 225274 13806984 ~ 13809993 (-)
lctlb lctl coding downstream 230093 13797624 ~ 13805174 (-)
LOC113534839 NA coding downstream 246420 13788751 ~ 13788847 (-)
LOC113534840 NA coding downstream 247068 13788102 ~ 13788199 (-)
kif23 kif23,LOC107672274,LOC107686310 coding upstream 221006 14256547 ~ 14265263 (-)
paqr5a paqr5,LOC108263988 coding upstream 230543 14266084 ~ 14276651 (-)
LOC113534338 NA coding upstream 253484 14289025 ~ 14294440 (-)
ighmbp2 ighmbp2 coding upstream 280294 14315835 ~ 14324438 (-)
bcl2l13 bcl2l13 coding upstream 331266 14366807 ~ 14384784 (-)
G99187 smad3b,smad3,LOC108264458,LOC107738715,LOC108424035,LOC107686302,LOC107672260 non-coding downstream 84546 13950147 ~ 13950721 (-)
G99188 smad3,LOC108264458,LOC107686302,LOC108424035 non-coding downstream 88356 13944751 ~ 13946911 (-)
G99184 LOC101268919,LOC101159109 non-coding downstream 102333 13932553 ~ 13932934 (-)
G99166 NA non-coding downstream 191030 13843999 ~ 13844237 (-)
G99165 NA non-coding downstream 192038 13842819 ~ 13843229 (-)
G99396 NA non-coding upstream 243902 14279443 ~ 14630745 (-)
G99408 NA non-coding upstream 293386 14328927 ~ 14334134 (-)
G99401 wee2 non-coding upstream 314177 14349718 ~ 14355619 (-)
G99433 NA non-coding upstream 413315 14448856 ~ 14453107 (-)
LOC113534271 NA non-coding upstream 475383 14510924 ~ 14519784 (-)
c6h15orf39 c4h15orf39 other downstream 472693 13550680 ~ 13562574 (-)
G98770 NA other downstream 982956 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 1611289 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 1629986 12396507 ~ 12405281 (-)
admb NA other downstream 1689815 12311822 ~ 12345452 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 300395 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 1311625 15347166 ~ 15357563 (-)
G101178 NA other upstream 4151906 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 5944528 19980069 ~ 19980259 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 6360325 20395866 ~ 20416574 (-)

Expression


Co-expression Network