G99260 (kif23)


Basic Information

Item Value
gene id G99260
gene name kif23
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 14257912 ~ 14260742 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU117677
ATGAGTTTGGTTTGGATCTCGCCATCAGAGGCCACTTCTTGGTGTGTCAGCATGTACTTGTCACACTTGGACAGGGCTTTCTCGCTGGGAGCGGTCACCTTGATCGAGTTGGAAACGCTGGGCTGCATGACCGTGTCCAGCTCCACATTGGTGCTGGGTTTGTGATCCACCCATCTCTCACCACCAGCTGAGTGCGAGCGCCTGTGCAGAGGCCGAACCGCCGGCCCAGTCTGTAACCTCTCTCCTCTACGTCTACATCTGCTGGCTGAAATGGCACCTCACAGTCTCTGGCCCAGCACCTGCCTCTCCTCCTGCTAAGGCTTCCAGGAAGACCCTGACCTCTGCTTCTACCATGGGGAGGGGAGGGGCTGCCCTGCCTGTCGGCCTGTGGCGTTCGCTGCTCCCACTCGGAGATGCAGGAGGCCACAGACACACTGCTAGTGCTGGGGGAAAGAGGGGCTGGCCTGACAACTTTGGGAAGGACATATTCTGAGGCCTGACAGGAGAAGGAAGCAGTGGATTTAGACTGCACACAGATTTCAGTTAGTACACATGGATCACATGCACATCATATTTGCTTAAGAACAAGATCAGTAACTGATTCTGAAATGTTAGGCACAAGtattatacaaatatttcagaaaaggataatgcaaatgaaaaaaacaaaagcttagAAGCAGacagtaaaatgacaaattatagAGTGGGTCAAATTAAAGACGTACAGGCATCGGCGAGGGCGAGGCTGATCTCTTTGCAGGCACTCTGTCCCTTTCTCGGGAAGGTCGCTCGGGTTTATCTGGTCGGGTGTCTGCCTTGCTCTCCGTTACTATAGCTTTGAGCTGCTTCAGCTTTTCGTCCTTTACCCAAAGCTTGTTCTGCATTTCCAGTTCCTTGGCATTTACCCGCCTCTCCtgaaaaataacacaaagcTTCAAGCCAAAACCCATACAGAATCTAACTCGGCCTCCTTGAGAGGGTAACACACAGCCTGGGCAGAGACATATCACAGGAAATGGACCACTGGAAACCTAACTTCCCAAATATCTGATGGTTTGGTGTTTCTAGTCAATGCACCGCTTATGTATAGATAATTTAACAAATAATTAGCATACTGGTATCAAAAAGCAGAGTCTACACTGATAGAAGATAGGCATTATTTCAATATCTGTAAGAAGTAAATCAAATGCTCATCTTTCAACTAGAAAATCATAACATTTTCAAATATAGTCAGCAACTGAGAGGCAAAAGATAGCAAGGctactcacacactccttctgCCACCTGAGCTTTTCATCTGAGACCAACCCTTGCATGCGTGCCTCCATTCGCTTCTTTTCTGAAAGCTCCCGCTGCAACCTCTGCTCTCTGCTCTCCAGCTCGTGCTGTAAGGCACGCTTATCCTCCTCATAGATGTTTGTGGTTTTCTGCAGGATGTCAATCTGGACACAAAGAAGGCAGCAGTAAGCTTCACACCCAACATAATTGTAATAATGATTTCACGGTTTTGAAGGTTCAGAATTACCTTGTACTCCAGCATCTTGGATTTCTTCTCCAGGCGATCAATCTCATTTTTCTGGTTCTGGATCATTTTGTCCTTCTCGCCCAGCTTGCCGCGTTGCTCATGGATGAAATTCTCTTTGGAGACGAGGTTGCCATCCAGTTCTTGAAGCATGGACTTCAGCATATTGGCTATGAAGAGAATAAATAATGAGCACTTGCATTCTCAGTAGACACTGCAACCACAAACTGCTGAGACAAACATACCGGATTTGTTGTACTCTTCAGTCATCATCTGGCGGATCTTGTGCCGCTTCTCCAAGGCCTCAATGAGTCTAGGAAGCGTATGGTCATCAGTAGGGTCAGTGATTTCACAGGGAGGCAGTGGAGGCAGGTTTTGCAACAGATGGCTCAGGGCCTTGGAAGGAGGTTCTGGACAGAATCACAAGCATTAGAAACAAACAACTTGCACCTTGCTTAGAAGTGCCATTCTGTACAAGAGGATAAGCAATACCGCCATCTACTGGGCCTCCACGTTCCTCTAGCCGACGAGACAGTTCCTCTTTGAAGGCCTGGTTCCTCTGTCGGCGTCCTGCAGCAAAGCCACACATGGGCCTGTCAACAGGCCGGGCCACTTCCACCTCCTGAGTCATCTCAGCAAATCGCATCACCagctgccaaacacacacagcacagtcacAGAACCACAATAGTGAATATCAGAATTCATGACtcaaaacataatattagcttacCATTGTTTCTTCATAATCATCAGCCTTAGGGTTCACACAGACCACCATTCTGACTTTCCCCTCTCcatcaaaataatttttgaaCAGATGAGTCACTTTAGAGTCTCTGTATGGGA

Function

symbol description
kif23 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within cytoskeleton-dependent cytokinesis; embryonic cleavage; and vesicle transport along microtubule. Located in several cellular components, including cleavage furrow; microtubule; and nucleus. Is expressed in proliferative region. Orthologous to human KIF23 (kinesin family member 23).

NR:

description
PREDICTED: kinesin-like protein KIF23 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117677 True 2374 lncRNA 0.47 2 14257912 14260742

Neighbor

gene id symbol gene type direction distance location
tle3a LOC108264729,LOC108424090,LOC107596960,LOC107686309 coding upstream 72228 14164588 ~ 14185684 (+)
uacaa LOC108264780 coding upstream 151563 14091750 ~ 14106349 (+)
morf4l1 morf4l1,LOC107596963,LOC107686360,LOC107738770,LOC107708218,LOC107672187 coding upstream 169013 14078741 ~ 14088899 (+)
pias1b pias1b,pias1,LOC108264782,LOC108424062,LOC107596961 coding upstream 183956 14045883 ~ 14073956 (+)
iqch iqch coding upstream 230445 13961829 ~ 14027467 (+)
kbtbd4 kbtbd4,LOC107596956,LOC107738697,LOC107686314,LOC107708223,LOC107672308 coding downstream 34969 14295711 ~ 14300664 (+)
rapsn rapsn coding downstream 43921 14304663 ~ 14314817 (+)
agk agk coding downstream 64334 14325076 ~ 14335323 (+)
wee2 wee2 coding downstream 88425 14349167 ~ 14354920 (+)
bida NA coding downstream 95151 14355893 ~ 14364805 (+)
G99006 NA non-coding upstream 267759 13989942 ~ 13990153 (+)
G98996 NA non-coding upstream 333599 13891424 ~ 13924313 (+)
LOC113534555 NA non-coding upstream 411767 13837717 ~ 13846145 (+)
G98960 NA non-coding upstream 473137 13740823 ~ 13784775 (+)
LOC113534369 NA non-coding upstream 499423 13757853 ~ 13758489 (+)
G99261 NA non-coding downstream 699 14261441 ~ 14262517 (+)
G99276 ighmbp2 non-coding downstream 56855 14317597 ~ 14318654 (+)
G99362 NA non-coding downstream 369593 14630335 ~ 14631361 (+)
G99516 LOC108263939 non-coding downstream 464876 14725618 ~ 14725938 (+)
G99518 NA non-coding downstream 469242 14729984 ~ 14730183 (+)
skor1b skor1 other upstream 215460 14035228 ~ 14042452 (+)
smad3b smad3,LOC108264458,LOC108424035,LOC107740443,LOC107755098 other upstream 301561 13932539 ~ 13956351 (+)
G98972 NA other upstream 468522 13785095 ~ 13789390 (+)
G98946 megf11 other upstream 542146 13691607 ~ 13715766 (+)
nlrc5 nlrc5 other upstream 1399378 12837299 ~ 12858534 (+)
G99341 synm other downstream 260059 14520801 ~ 14524480 (+)
carmil2 carmil2,rltpr other downstream 1039740 15300482 ~ 15346146 (+)
G100306 NA other downstream 2088715 16349457 ~ 16349787 (+)
G100345 NA other downstream 2339515 16600257 ~ 16601067 (+)
rgma NA other downstream 2396859 16657601 ~ 16680793 (+)

Expression


Co-expression Network