G101403


Basic Information

Item Value
gene id G101403
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 18551446 ~ 18551724 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU120088
TCGCACATGTGCAGAATCATGCATGCAGAGAGACCCTTGCTCGCATGACGATGACGCCCGAGCATTGACGGGTGTGTGGGTCACTGTAGAATTTAACAAAGCCTTGGAGATGGGCTACAGAGTGGCTAAAATCACGGAGGTATGGCACTTCGATAAAAGCAGCGACTCTGTGTTCACAGGGTACGTACACGCgtttttaaaaggaaagcaGGAAGCGTCCGGTTACCCGCCCGAAGCTAAGGATCCGGTCAGCAGGGAGAGGTACGTCAGTGAGTATCT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU120088 True 279 TUCP 0.52 1 18551446 18551724

Neighbor

gene id symbol gene type direction distance location
cd81b cd81b,LOC107690398,LOC108435318,LOC107554556,LOC107715206,LOC107691158,LOC107746582 coding upstream 309837 18224061 ~ 18241609 (+)
reln reln coding upstream 362962 17761517 ~ 18188484 (+)
kti12 kti12,LOC107715238,LOC107725737,LOC107562123 coding upstream 949272 17581883 ~ 17602174 (+)
sec11a sec11a,LOC107691153,LOC107562127 coding upstream 1009793 17530434 ~ 17541653 (+)
slc28a1 LOC108263923 coding upstream 1173106 17363125 ~ 17378340 (+)
idh2 idh2,LOC107714782,LOC107691122,LOC106514339 coding downstream 129793 18681517 ~ 18732814 (+)
zgc:162879 NA coding downstream 608262 19159986 ~ 19239977 (+)
psmd8 psmd8,LOC108413249,LOC107672785,LOC107554985,LOC107714529 coding downstream 727426 19279150 ~ 19283703 (+)
spred3 spred3,LOC108264009,LOC107554984 coding downstream 743768 19295492 ~ 19308801 (+)
LOC113526414 LOC108263931,LOC108265089,LOC108443054 coding downstream 802402 19354126 ~ 19360323 (+)
G101402 NA non-coding upstream 2193 18549045 ~ 18549253 (+)
LOC117597608 NA non-coding upstream 3157 18547925 ~ 18548289 (+)
LOC117597609 NA non-coding upstream 5780 18545172 ~ 18545666 (+)
G101388 NA non-coding upstream 13637 18537586 ~ 18537809 (+)
G101387 NA non-coding upstream 14337 18536901 ~ 18537109 (+)
G101411 NA non-coding downstream 17274 18568998 ~ 18569765 (+)
G101417 NA non-coding downstream 45767 18597491 ~ 18597706 (+)
G101422 NA non-coding downstream 50198 18601922 ~ 18602186 (+)
G101436 NA non-coding downstream 191356 18743080 ~ 18743291 (+)
G101444 NA non-coding downstream 201357 18753081 ~ 18753287 (+)
LOC113539654 NA other upstream 1058354 17489546 ~ 17493092 (+)
LOC117597546 LOC107707548,LOC106676627,LOC106676599,LOC106675328,LOC106675542,LOC107675252 other upstream 1107978 17400426 ~ 17443468 (+)
rgma NA other upstream 1870653 16657601 ~ 16680793 (+)
G100345 NA other upstream 1950379 16600257 ~ 16601067 (+)
G100306 NA other upstream 2201659 16349457 ~ 16349787 (+)
G101419 NA other downstream 46990 18598714 ~ 18599375 (+)
G101434 znf710 other downstream 186619 18738343 ~ 18739998 (+)
G101466 NA other downstream 241911 18793635 ~ 18794273 (+)
sema4ba sema4b,sema4ba,LOC107691120,LOC107556264,LOC107714785 other downstream 405704 18957428 ~ 19122497 (+)
G101602 NA other downstream 570888 19122612 ~ 19123877 (+)

Expression


Co-expression Network