G101419


Basic Information

Item Value
gene id G101419
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 18598714 ~ 18599375 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU120104
atttaatactgtatcaaaattaactaggaataagaccacaatagaaacacgcacacaatcattatatagcaacAATGacttcattaattttttcaatggtaaaattctaaatatcaggctagaaattcagactattaatttaaaaccagacagttctataactaaccctgtagatgataatatgataatattagataaacaactacaacgctttactccccttgaagagactgaactaatttcactaatttcatcatcaaaatcatcaatctgtatgctagatcctttacctacttgtttcctcaaacagataattcctgaaacaatcaaacctcttttaaagataatcaattcttcccttagcattggctatgtacctaaatcttttaaattagcagttatcaagcccctgattaaaaaacctgaccttgacccctgtcagctgtctaactatagaccaatatcaaacctcccctttatttccaaggtcctagaaaaggttgtagcacagcagctacgctcatacttacataggaataacattcatgaaatgtatcagtcaggatttaggcctcatcatagcacagagacagcactggtaaaagttgtaaatgacttactgctggcctctgatcagggttgtgtctccttgctggtgctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120104 True 662 TUCP 0.35 1 18598714 18599375

Neighbor

gene id symbol gene type direction distance location
cd81b cd81b,LOC107690398,LOC108435318,LOC107554556,LOC107715206,LOC107691158,LOC107746582 coding upstream 357105 18224061 ~ 18241609 (+)
reln reln coding upstream 410230 17761517 ~ 18188484 (+)
kti12 kti12,LOC107715238,LOC107725737,LOC107562123 coding upstream 996540 17581883 ~ 17602174 (+)
sec11a sec11a,LOC107691153,LOC107562127 coding upstream 1057061 17530434 ~ 17541653 (+)
slc28a1 LOC108263923 coding upstream 1220374 17363125 ~ 17378340 (+)
idh2 idh2,LOC107714782,LOC107691122,LOC106514339 coding downstream 82142 18681517 ~ 18732814 (+)
zgc:162879 NA coding downstream 560611 19159986 ~ 19239977 (+)
psmd8 psmd8,LOC108413249,LOC107672785,LOC107554985,LOC107714529 coding downstream 679775 19279150 ~ 19283703 (+)
spred3 spred3,LOC108264009,LOC107554984 coding downstream 696117 19295492 ~ 19308801 (+)
LOC113526414 LOC108263931,LOC108265089,LOC108443054 coding downstream 754751 19354126 ~ 19360323 (+)
G101417 NA non-coding upstream 1008 18597491 ~ 18597706 (+)
G101411 NA non-coding upstream 28949 18568998 ~ 18569765 (+)
G101402 NA non-coding upstream 49461 18549045 ~ 18549253 (+)
LOC117597608 NA non-coding upstream 50425 18547925 ~ 18548289 (+)
LOC117597609 NA non-coding upstream 53048 18545172 ~ 18545666 (+)
G101422 NA non-coding downstream 2547 18601922 ~ 18602186 (+)
G101436 NA non-coding downstream 143705 18743080 ~ 18743291 (+)
G101444 NA non-coding downstream 153706 18753081 ~ 18753287 (+)
LOC113538061 NA non-coding downstream 203261 18802636 ~ 18816962 (+)
G101583 NA non-coding downstream 269725 18869100 ~ 18869377 (+)
G101403 NA other upstream 46990 18551446 ~ 18551724 (+)
LOC113539654 NA other upstream 1105622 17489546 ~ 17493092 (+)
LOC117597546 LOC107707548,LOC106676627,LOC106676599,LOC106675328,LOC106675542,LOC107675252 other upstream 1155246 17400426 ~ 17443468 (+)
rgma NA other upstream 1917921 16657601 ~ 16680793 (+)
G100345 NA other upstream 1997647 16600257 ~ 16601067 (+)
G101434 znf710 other downstream 138968 18738343 ~ 18739998 (+)
G101466 NA other downstream 194260 18793635 ~ 18794273 (+)
sema4ba sema4b,sema4ba,LOC107691120,LOC107556264,LOC107714785 other downstream 358053 18957428 ~ 19122497 (+)
G101602 NA other downstream 523237 19122612 ~ 19123877 (+)
cdon cdon other downstream 1320674 19920049 ~ 19969787 (+)

Expression


Co-expression Network