G101466


Basic Information

Item Value
gene id G101466
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 18793635 ~ 18794273 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU120151
aattcCGAGGAAAAAACTATGGAATCACCCTGTCAATTTCCTTTCCAACCTGCATCAGATTAGATCTGCTCGTTAATCTGCAGTTAAAAAGGAGTGATCACACCTTGGAGAGCTGTTACACCAAGTGGATTGACATGAATCATGGCTCCAACACGAGAGATGTCAATTGAAACAAAGGAGAGAATTATCAAACTCCTTAAAGAGGGTAAATCATCACGCAATGTTTCAAAAGATGTTGGTTGTTcacagtcagctgtgtctaaaatctGGACCAAGTACAAACAACACGGGAAGGTTGTTAAAGGCAAGCGTACTGGTAGACCAAGGAAGACATCAAAGCGTCAAGACAGAAAACTTAAGGCAATATGtcttgaaaacagaaaatgcacaacaaaacaaatgaggaacaaatgggaggaaactggagtcaACGTCTGTGACCGAACCGTGAGAAATCGCCTAAAGGAAATGGGATTTACATACAGAAAAGCTAAACGAAAACCATCATTAACacctaaacagaaaaaaacaaggttacagtgggctaaggaaAAGCAATCTTGGACTGTGGATGACTGGATGAAAGTCattttcagtgatgaatcacatATCTGCATTGGGCAAGgtgatgatgctgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120151 True 639 TUCP 0.40 1 18793635 18794273

Neighbor

gene id symbol gene type direction distance location
idh2 idh2,LOC107714782,LOC107691122,LOC106514339 coding upstream 60821 18681517 ~ 18732814 (+)
cd81b cd81b,LOC107690398,LOC108435318,LOC107554556,LOC107715206,LOC107691158,LOC107746582 coding upstream 552026 18224061 ~ 18241609 (+)
reln reln coding upstream 605151 17761517 ~ 18188484 (+)
kti12 kti12,LOC107715238,LOC107725737,LOC107562123 coding upstream 1191461 17581883 ~ 17602174 (+)
sec11a sec11a,LOC107691153,LOC107562127 coding upstream 1251982 17530434 ~ 17541653 (+)
zgc:162879 NA coding downstream 365713 19159986 ~ 19239977 (+)
psmd8 psmd8,LOC108413249,LOC107672785,LOC107554985,LOC107714529 coding downstream 484877 19279150 ~ 19283703 (+)
spred3 spred3,LOC108264009,LOC107554984 coding downstream 501219 19295492 ~ 19308801 (+)
LOC113526414 LOC108263931,LOC108265089,LOC108443054 coding downstream 559853 19354126 ~ 19360323 (+)
lmo2 lmo2,LOC107554475 coding downstream 724330 19518603 ~ 19526473 (+)
G101444 NA non-coding upstream 40348 18753081 ~ 18753287 (+)
G101436 NA non-coding upstream 50344 18743080 ~ 18743291 (+)
G101422 NA non-coding upstream 191449 18601922 ~ 18602186 (+)
G101417 NA non-coding upstream 195929 18597491 ~ 18597706 (+)
G101411 NA non-coding upstream 223870 18568998 ~ 18569765 (+)
LOC113538061 NA non-coding downstream 8363 18802636 ~ 18816962 (+)
G101583 NA non-coding downstream 74827 18869100 ~ 18869377 (+)
G101586 NA non-coding downstream 77969 18872242 ~ 18872458 (+)
G101593 NA non-coding downstream 110772 18905045 ~ 18905327 (+)
G101603 NA non-coding downstream 329751 19124024 ~ 19125229 (+)
G101434 znf710 other upstream 53637 18738343 ~ 18739998 (+)
G101419 NA other upstream 194260 18598714 ~ 18599375 (+)
G101403 NA other upstream 241911 18551446 ~ 18551724 (+)
LOC113539654 NA other upstream 1300543 17489546 ~ 17493092 (+)
LOC117597546 LOC107707548,LOC106676627,LOC106676599,LOC106675328,LOC106675542,LOC107675252 other upstream 1350167 17400426 ~ 17443468 (+)
sema4ba sema4b,sema4ba,LOC107691120,LOC107556264,LOC107714785 other downstream 163155 18957428 ~ 19122497 (+)
G101602 NA other downstream 328339 19122612 ~ 19123877 (+)
cdon cdon other downstream 1125776 19920049 ~ 19969787 (+)
bcl9l bcl9l,cxcr5,LOC108264003 other downstream 1210083 20004356 ~ 20053142 (+)
ddx6 ddx6,LOC107691843,LOC107670620,LOC107572719 other downstream 1282692 20076965 ~ 20092932 (+)

Expression


Co-expression Network