G103156 (LOC107737118)


Basic Information

Item Value
gene id G103156
gene name LOC107737118
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 22223585 ~ 22224021 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU122103
ctgaagtggaaacttttcacttcctggtgcggagaccgccggcttgaccctgttcactgcccagttggtacagtgctggagttcttgcaggcccgcctctccgcgggactgacccactccaccctgaaggtgtacgtggcggctattgcggcctgccacgcccctctcgatggccagtcagtgggcaggcacccctgggtgacacgtttcctccgcggtgcgctgaggatcagacctccagctcgatctcgggtcccctcgtgggacctggccgtggttttagaggctctctgcaaaccccccttcgagcccatagaggagatttcggaccgtcttctgacgttgaaaactgcctttctcttggcaatttcctctcttaggagagtgggggatcttcaggccctctcggtggccccttcctatttagactttgcgcc

Function

NR:

description
hypothetical protein EH28_02148

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122103 True 437 lncRNA 0.60 1 22223585 22224021

Neighbor

gene id symbol gene type direction distance location
serpini1 serpini1,LOC108410963,LOC107705789,LOC107735309 coding downstream 559258 21641638 ~ 21664327 (-)
LOC113526476 LOC108263963 coding downstream 589028 21623853 ~ 21634557 (-)
ppfia1 ppfia1 coding downstream 648739 21495122 ~ 21574846 (-)
LOC113526680 cttn,LOC107711361,LOC107692464 coding downstream 731104 21467974 ~ 21492481 (-)
LOC113526809 ltbp4 coding downstream 974082 21149063 ~ 21249503 (-)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107600237,LOC107735288 coding upstream 112739 22336760 ~ 22341441 (-)
LOC113526884 NA coding upstream 926087 23150108 ~ 23153649 (-)
LOC113526825 LOC108263933 coding upstream 934711 23158732 ~ 23162309 (-)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309 coding upstream 1073334 23297355 ~ 23299010 (-)
aqp11 aqp11 coding upstream 1110156 23334177 ~ 23340381 (-)
G103099 NA non-coding downstream 427342 21795773 ~ 21796243 (-)
G102983 NA non-coding downstream 570811 21570431 ~ 21652774 (-)
G102808 NA non-coding downstream 904033 21318140 ~ 21319552 (-)
G102809 NA non-coding downstream 911117 21309303 ~ 21312468 (-)
G102691 shkbp1 non-coding downstream 1098630 21123315 ~ 21124955 (-)
G103158 NA non-coding upstream 308 22224329 ~ 22224564 (-)
G103159 NA non-coding upstream 3607 22227628 ~ 22227863 (-)
G103161 NA non-coding upstream 4364 22228385 ~ 22228716 (-)
G103235 NA non-coding upstream 111925 22335946 ~ 22336703 (-)
G103410 NA non-coding upstream 641903 22865924 ~ 22883153 (-)
sertad3 sertad3 other downstream 1210485 20995341 ~ 21013100 (-)
G102566 NA other downstream 1256675 20953602 ~ 20966910 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other downstream 1807011 20395866 ~ 20416574 (-)
LOC113527007 NA other downstream 2243326 19980069 ~ 19980259 (-)
G101178 NA other downstream 4026779 18187447 ~ 18196806 (-)
si LOC108264758,LOC108431149 other upstream 7427 22231448 ~ 22306769 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other upstream 1366924 23590945 ~ 23610448 (-)
rnpepl1 rnpepl1,LOC107758061,LOC107671854,LOC107670589,LOC107602123,LOC107717622,LOC107575502 other upstream 1424663 23648684 ~ 23699707 (-)
rpl35a rpl35a,LOC107670602,LOC106612432 other upstream 1508849 23732870 ~ 23738779 (-)
sipa1l3 sipa1l3 other upstream 2256281 24480302 ~ 24574675 (-)

Expression


Co-expression Network