blvrb (blvrb,LOC107692505,LOC106612705)


Basic Information

Item Value
gene id blvrb
gene name blvrb,LOC107692505,LOC106612705
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 21013235 ~ 21020541 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913450.2
CCCCCCCGCCCCGTGCCCAGCTGTTGTCACGTGACCAGAGTTCTCCTGAGAACTGAATTAGCTATAAGAGAGGCGCTCCTGTTAAGACCATAACAACTCTGTGCTGGTGGTTTTAAGTGGAATACAGCTTACAGACGCAGTAAAATGTCTGATTCGATCAAAAACGTGGCGATCTTTGGCTCGACAGGAATGACAGGCTTGGCGACGTTACCTCTTGCAGTGGCAGCAGGATATAACGTGACTGTGCTGGTGAGGGATCCGTCCAGGCTGGCCGCTGACCATAAAGCCTCCCGGATTGTGGTGGGAGACGTCCTTAACAAAGAGGATGTGAAGAAGACTCTGGAGGGTCAGGATGCTGTCATCATCATCCTGGGCACAAGGAACGATCTTAGTCCTACCACCATGATGTCTGAGGGCACACGGAACATACTGGAGGGTATGAAAGCCCGCGGCATCTGCAAAGTGATTGCCTGCATGTCCGCGTTTTTGCTGTGGGACCGGGCAAAAGTTCCTCCTCGCCTGGTTCCTGTCACTGAAGACCATGAGCGCATGTACATGTTGCTGAAGGAGTCTGGACTGGATTATGTAGCTGTGATGCCTCCACACATCGCAGATAACCATCCTCTGACTGAAAAGTACACGGTCACTGAGAACATGCTGCGAGGAAGAGTCATCTCCAAACACGACCTGGGTCACTTCTTCGTCAAGTGTCTTTCCACATCTGAGTGGGACAGGAAGACAGTGGGGGTGTGTGGGGAGTACAGTTAAACTCCCCACTGTTCTACACAACTTCAGTTCTGAGTTTCTTTTAATATGATGCTAACATTTATACGCATAAGGTTTTGCAACGTGCCTTTTTAACACGACAGATCTTCATTACATAAAAGAAATCATTGTAATTACACAGGTAATAATGCAGGATAATAACCTCATTGtgattaaaaactattttgcagtgtgtcagtTCGGTCGATTAAATGCTTCTTAGGTGTAcgatattcttttatttttaaaaattaaaaatctattttgaaACCAA

Function

symbol description
blvrb Is expressed in several structures, including heart; hematopoietic system; kidney; liver; and yolk syncytial layer. Orthologous to human BLVRB (biliverdin reductase B).

NR:

description
PREDICTED: flavin reductase (NADPH)

GO: NA

KEGG:

id description
K05901 BLVRB; biliverdin reductase / flavin reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913450.2 True 1039 mRNA 0.46 5 21013235 21020541

Neighbor

gene id symbol gene type direction distance location
LOC113526481 NA coding downstream 83285 20924978 ~ 20929950 (-)
daw1 daw1,LOC107727686,LOC107670581,LOC107576612,LOC107717604 coding downstream 168031 20820806 ~ 20845204 (-)
fbxo36a NA coding downstream 440806 20566740 ~ 20572429 (-)
zbtb38 LOC108264297 coding downstream 449154 20541643 ~ 20564081 (-)
rasa2 rasa2,LOC108264552 coding downstream 477213 20489540 ~ 20536022 (-)
esrrd LOC108263916 coding upstream 107407 21127948 ~ 21137281 (-)
LOC113526809 ltbp4 coding upstream 128522 21149063 ~ 21249503 (-)
LOC113526680 cttn,LOC107711361,LOC107692464 coding upstream 447433 21467974 ~ 21492481 (-)
ppfia1 ppfia1 coding upstream 474581 21495122 ~ 21574846 (-)
LOC113526476 LOC108263963 coding upstream 603312 21623853 ~ 21634557 (-)
G102600 LOC108264595 non-coding downstream 9455 20995525 ~ 21003780 (-)
G102458 NA non-coding downstream 327050 20638871 ~ 20686185 (-)
G102472 NA non-coding downstream 432067 20578690 ~ 20581168 (-)
G102453 NA non-coding downstream 516934 20494257 ~ 20496301 (-)
G102449 NA non-coding downstream 534679 20478333 ~ 20478556 (-)
G102691 shkbp1 non-coding upstream 102774 21123315 ~ 21124955 (-)
G102809 NA non-coding upstream 288762 21309303 ~ 21312468 (-)
G102808 NA non-coding upstream 297599 21318140 ~ 21319552 (-)
G102983 NA non-coding upstream 549890 21570431 ~ 21652774 (-)
G103099 NA non-coding upstream 775232 21795773 ~ 21796243 (-)
sertad3 sertad3 other downstream 135 20995341 ~ 21013100 (-)
G102566 NA other downstream 46325 20953602 ~ 20966910 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other downstream 596661 20395866 ~ 20416574 (-)
LOC113527007 NA other downstream 1032976 19980069 ~ 19980259 (-)
G101178 NA other downstream 2816429 18187447 ~ 18196806 (-)
si LOC108264758,LOC108431149 other upstream 1210907 22231448 ~ 22306769 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other upstream 2570404 23590945 ~ 23610448 (-)
rnpepl1 rnpepl1,LOC107758061,LOC107671854,LOC107670589,LOC107602123,LOC107717622,LOC107575502 other upstream 2628143 23648684 ~ 23699707 (-)
rpl35a rpl35a,LOC107670602,LOC106612432 other upstream 2712329 23732870 ~ 23738779 (-)
sipa1l3 sipa1l3 other upstream 3459761 24480302 ~ 24574675 (-)

Expression


Co-expression Network