ccnp


Basic Information

Item Value
gene id ccnp
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 20382810 ~ 20389633 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913555.2
CCTCACGTGCGCTAATTAACTTGCAGTGGATTTGGCAGGTGCGCTCGAGCAGGTAGCTGCAGGTTCCTGGTGAGCGCGTGTCCGGTTGCGTCATGGCCAGAACCGGATTCTGTGATTCCAGGGCGCTGTTGGACCGCAAGACAGAAGAAGCCCGATTCCCTTTGCGCGCGTGGGCGAACGCATGCGCTGTGCGGGAGCGCGGGGTGCTGAGTGAGGGAGAGGAGCAGAAACAGCAACACAAAGTGGACAGTACAGAGTACAGATGGGTCCAGCGGTTGCCGTTATTTGCAGAAGATGGAATCATTATGGAGTTTGCTCAGCAGAGCAGATCAGTTGTTCCTGCAGTAGAGCATTATGAGGAGGAGGCTGTGTTGAATCACCTGCATGGTCTGCAGCTTGCGCCTGCACTAAGAGATCTAGTTCCTGAGCTGGTGCACAGAGAGATAGAAGTGGCAATGAGCAAACTTGGGCTGCTGTACGACCGTACCTACACATTGGACATTTTTTCTGACATGATGAGGAGTCAGCAGCACCTTGCTCTGTCGAGCAGCGAACTGCCCAAACCATTTACAGAAACAACGCGTGCCATTTTGGTGGACTGGCTCATTCAGGTTCATGAAGCATTTAACTTCTCAGAGGAGACACTGTATTTAGCAGTGCACCTGCTGAACCGTGTGCTCCGGCAGATCAAAATCTCCATCTCCAACTTGCAGCTACTCGGTGTCGTCTGTCTATTTCTCGCCGCAAAGAAAGAGGAGTGCCTGCTGCCAGAGgtATCTGAGCTGTGCTACCTGATGGCGAACACTTACAGTAAGAAGCAGTTGTTGCGCATGGAGCGCAGGGTTTTGTGCACGCTGAAGTTTGACCTGTCTCACACTCCACCCATTCACTTCCTGCTACTGTCAGCGTACATTGCGCGTTGTGGCGAGAAGGTGATCTGCATGGCACGGTACCTGTTGGAGTTGTCTCTCCTCGAagcgaagtgtgtgtgttttttcccgGTTCagctcgctgctgctgctctgcGTCTGGCACGCCATCTCATTCAGGAGCCAAACACCCCGGAGAGTGAGGCGGCCTGGTGTATCGCATCTACTATATACTTGGGCAGCGAGGCAACACTCTTCACAATCATGCACATCATGGCCGCTGCTGCAGCGCGAGCTCACAACCAAGAAACTCGAGCGACGTTCGTCAAATTCTCTACAAAGGAGACGCTGTATGTGAGTCTGCACCCTGCACTGAAGAGTGCTCCCCGTCTGCTGAGCCGTTATACCTGAACAATAGTAACAGTAAAAAGTAGTGTCTGTAACTAAatgtttgtatctgtatcttgTTACTCTTTTAGGCCATCTTGTCCAATTTGtcaaaaaaagttacatttgtttgtatccattttaaatatttgaattaaaaGTGCTTGTTCgaaaattaa

Function

NR:

description
cyclin N-terminal domain-containing protein 2

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913555.2 True 1435 mRNA 0.51 9 20382810 20389633

Neighbor

gene id symbol gene type direction distance location
si:ch211-132b12.7 NA coding downstream 5478 20362330 ~ 20377332 (-)
nectin1b nectin1 coding downstream 90487 20215142 ~ 20292323 (-)
LOC113526513 cxcr5 coding downstream 328374 20051332 ~ 20054436 (-)
pik3c2a pik3c2a,LOC108264692 coding downstream 885817 19407050 ~ 19496993 (-)
dhx34 dhx34 coding downstream 1049380 19309888 ~ 19333430 (-)
vaspb vasp coding upstream 32640 20422273 ~ 20453147 (-)
snrpd2 snrpd2,SNRPD2,LOC106612977,LOC106603799 coding upstream 70710 20460343 ~ 20464685 (-)
foxg1c NA coding upstream 80727 20470360 ~ 20471089 (-)
pglyrp5 LOC108264553 coding upstream 83546 20473179 ~ 20476270 (-)
polr2i polr2i,rpb9 coding upstream 91193 20480826 ~ 20484801 (-)
G102434 NA non-coding downstream 23269 20358215 ~ 20359541 (-)
G102272 NA non-coding downstream 26213 20282185 ~ 20356597 (-)
G102270 NA non-coding downstream 91819 20244335 ~ 20290991 (-)
G102271 NA non-coding downstream 119670 20257332 ~ 20263140 (-)
G102225 NA non-coding downstream 289008 20092984 ~ 20093802 (-)
G102444 NA non-coding upstream 82238 20471871 ~ 20472745 (-)
G102449 NA non-coding upstream 88700 20478333 ~ 20478556 (-)
G102453 NA non-coding upstream 104624 20494257 ~ 20496301 (-)
G102472 NA non-coding upstream 189057 20578690 ~ 20581168 (-)
G102458 NA non-coding upstream 249238 20638871 ~ 20686185 (-)
LOC113527007 NA other downstream 402551 19980069 ~ 19980259 (-)
G101178 NA other downstream 2186004 18187447 ~ 18196806 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other downstream 5025247 15347166 ~ 15357563 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other downstream 6035802 14335936 ~ 14347008 (-)
c6h15orf39 c4h15orf39 other downstream 6820236 13550680 ~ 13562574 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 6233 20395866 ~ 20416574 (-)
G102566 NA other upstream 563969 20953602 ~ 20966910 (-)
sertad3 sertad3 other upstream 605708 20995341 ~ 21013100 (-)
si LOC108264758,LOC108431149 other upstream 1841815 22231448 ~ 22306769 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other upstream 3201312 23590945 ~ 23610448 (-)

Expression


Co-expression Network