il34


Basic Information

Item Value
gene id il34
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 13398275 ~ 13404730 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927072.2
atgtCGCAGAGAGCGGTGATCTCAGCTCTGTGTTCTTCACATGGTCGTGTGGGGAGGAGGATCTCCAAGCTCAGGCGTccacgcagacacacacgcacagggtCAGCGTTCAAAGAAACGCCGTGGGAATTTccaaatctctctcttttttcagtaTTTCGCGTAGGGGGGCTTtacagagagtcagagagtcGGAGGTGGGAGATTTTTAAATCACACGCCAGACGGGTATGACCAGTTGACTGAGCTCTGAGCGCTGAGCACCGTGGCGCGATCAGACGCAGGCGCTGAACATTTCCACCGAAAAGCTGCTTCACAGAGACACTCCTTTGACAACACCAAGGATTAAAGCAGCCTGCATAAGCTCAGTGAAAAGGCCTTACCAGCACGTGTCTGTGTCCGGCTGGAAAAGTTTGGAGACGTTTGTGCTTGAACTTTGAAACAGTCTGCATCTGGATTTCACTTGAGTGCAGAGACTAGAGCTACTACAGAAGTATGGTCCGGTTTGAGGCTTGGCTCCTTAAGGGGCTTCTGGGTCTGATGTGGGCATTACCAATCTGGATGAGCTCTCTGACACCTCAGTTCTGCACATCTCTGGAAACGCTGAAAGATCAGCTCAATTTAACATTAAGAAGACGATATTTGaaACATAACTTCCCTATTAACTACACCATTGAAGTGCGTTATGAAGAGGTCTTCAGACTGAATAACATCAGTAAGCTGATGAATGACTCTGCAGATGTGAGGGATCTCCAGGATTTgtgggtcaggatcactgagaCAGACATAAAGAGGATTTTGGAGGTGCTGCCAGAGAGGCATCCGACGCGCCGTAAATACCTCGCAAACCTTGATTCCCTCTTCGCAATTGTCCAGCAAAGCTACCAGAGCCAGAACTCTGATGAGaGAGATTACCCAGAAAGCATTGAGAACATTTGGGTACGCTTGGGAGACAGAGACTATCAGGGATGGAAATCTGTCAGACCTAAATCTTTACTCGACACCTGTTATCGGACCATGCACTGCCTATTCAAGGAATGCTTCTTAAGGAACGGCAGCCAATATGACTACTGCAACATTCAGCACTGGAGACAAGCGAAGGGAACACAGGGATGATAGAAGGGTCCCTAAATGAGGATTTTCTACTGGCAAATGTGTAAAGGCCACAGGCATGCGCTGTGTTTATTAGTACTCACAAAGCTGTTGCCAACCAGCATACAATAcctttatccatccatctgtccatcctgtatgtgtgtatgtgt
>XM_026927073.2
atgtCGCAGAGAGCGGTGATCTCAGCTCTGTGTTCTTCACATGGTCGTGTGGGGAGGAGGATCTCCAAGCTCAGGCGTccacgcagacacacacgcacagggtCAGCGTTCAAAGAAACGCCGTGGGAATTTccaaatctctctcttttttcagtaTTTCGCGTAGGGGGGCTTtacagagagtcagagagtcGGAGGTGGGAGATTTTTAAATCACACGCCAGACGGGTATGACCAGTTGACTGAGCTCTGAGCGCTGAGCACCGTGGCGCGATCAGACGCAGGCGCTGAACATTTCCACCGAAAAGCTGCTTCACAGAGCAGACACTCCTTTGACAACACCAAGGATTAAAGCAGCCTGCATAAGCTCAGTGAAAAGGCCTTACCAGCACGTGTCTGTGTCCGGCTGGAAAAGTTTGGAGACGTTTGTGCTTGAACTTTGAAACAGTCTGCATCTGGATTTCACTTGAGTGCAGAGACTAGAGCTACTACAGAAGTATGGTCCGGTTTGAGGCTTGGCTCCTTAAGGGGCTTCTGGGTCTGATGTGGGCATTACCAATCTGGATGAGCTCTCTGACACCTCAGTTCTGCACATCTCTGGAAACGCTGAAAGATCAGCTCAATTTAACATTAAGAAGACGATATTTGaaACATAACTTCCCTATTAACTACACCATTGAAGTGCGTTATGAAGAGGTCTTCAGACTGAATAACATCAGTAAGCTGATGAATGACTCTGCAGATGTGAGGGATCTCCAGGATTTgtgggtcaggatcactgagaCAGACATAAAGAGGATTTTGGAGGTGCTGCCAGAGAGGCATCCGACGCGCCGTAAATACCTCGCAAACCTTGATTCCCTCTTCGCAATTGTCCAGCAAAGCTACCAGAGCCAGAACTCTGATGAGaGAGATTACCCAGAAAGCATTGAGAACATTTGGGTACGCTTGGGAGACAGAGACTATCAGGGATGGAAATCTGTCAGACCTAAATCTTTACTCGACACCTGTTATCGGACCATGCACTGCCTATTCAAGGAATGCTTCTTAAGGAACGGCAGCCAATATGACTACTGCAACATTCAGCACTGGAGACAAGCGAAGGGAACACAGGGATGATAGAAGGGTCCCTAAATGAGGATTTTCTACTGGCAAATGTGTAAAGGCCACAGGCATGCGCTGTGTTTATTAGTACTCACAAAGCTGTTGCCAACCAGCATACAATAcctttatccatccatctgtccatcctgtatgtgtgtatgtgt

Function

NR:

description
interleukin-34 precursor

GO: NA

KEGG:

id description
K22633 IL34; interleukin 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927072.2 False 1265 mRNA 0.48 8 13398275 13404730
XM_026927073.2 True 1268 mRNA 0.48 8 13398275 13404730

Neighbor

gene id symbol gene type direction distance location
lonp2 lonp2,LOC107686284 coding downstream 2582 13374859 ~ 13395693 (-)
znf423 znf423,si:ch211-216l23.1,LOC107738741,LOC107583782 coding downstream 261058 12988345 ~ 13137217 (-)
si:ch211-212o1.2 tmem189,si:ch211-212o1.2,LOC108264382,LOC107672277,LOC107738740,LOC107740306,LOC107583780,LOC103466733,LOC100695703 coding downstream 413630 12948587 ~ 12984645 (-)
psme3ip1 fam192a coding downstream 484029 12904033 ~ 12914246 (-)
bbs2 bbs2,LOC107686271 coding downstream 635636 12748014 ~ 12762639 (-)
sf3b3 sf3b3 coding upstream 6630 13411360 ~ 13440802 (-)
LOC113534846 NA coding upstream 32171 13436901 ~ 13436975 (-)
aars1 aars,LOC107686288,LOC107738729 coding upstream 70801 13475531 ~ 13491284 (-)
tgm2l LOC108264831,LOC108423869 coding upstream 89873 13494603 ~ 13505452 (-)
arl2bp arl2bp,LOC108264832,LOC107686354 coding upstream 117421 13522151 ~ 13525974 (-)
LOC117597528 NA non-coding downstream 80267 13311395 ~ 13318008 (-)
G98790 NA non-coding downstream 215725 13182343 ~ 13182550 (-)
G98776 NA non-coding downstream 263102 13129200 ~ 13135173 (-)
G98767 NA non-coding downstream 369678 13027458 ~ 13028597 (-)
G98607 NA non-coding downstream 559733 12838220 ~ 12838542 (-)
G99118 LOC108280567 non-coding upstream 240845 13645575 ~ 13647786 (-)
G99134 NA non-coding upstream 328221 13732951 ~ 13768470 (-)
LOC113534845 NA non-coding upstream 360196 13764926 ~ 13765056 (-)
LOC113534347 NA non-coding upstream 378045 13782775 ~ 13784737 (-)
LOC113534852 NA non-coding upstream 378825 13783555 ~ 13783624 (-)
G98770 NA other downstream 345964 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 974297 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 992994 12396507 ~ 12405281 (-)
admb NA other downstream 1052823 12311822 ~ 12345452 (-)
sspn sspn other downstream 1520071 11870908 ~ 11878204 (-)
c6h15orf39 c4h15orf39 other upstream 145950 13550680 ~ 13562574 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 931206 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 1942436 15347166 ~ 15357563 (-)
G101178 NA other upstream 4782717 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 6575339 19980069 ~ 19980259 (-)

Expression


Co-expression Network