ctcf (ctcf,LOC107583725)


Basic Information

Item Value
gene id ctcf
gene name ctcf,LOC107583725
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 15291924 ~ 15299579 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927163.2
CATGCGCAGCAACCGCCTCGGGCCGCCATTTTGTGCGGAGCCTACTCTGCAAAAGCGGGAGAGGATTAAAACCAGCGAAGGGGAAGCACGCAGTTGTACTTCGCCTCGTACTAAAGGAAGAGCGGACCGCGGGCCTTGTGTCGAATTCAACGAGAGGATAAACAAGCAAAAGCAGGTAATACCCATGGAAGGGGGACCGACTGAAGCCGTGGTGGACGAGACGGGGGATGCCTTCAAAAGCAAGGATTGTAAGACGTATCAACGGCGGCGTGAGGACGAAGAGGTTGAAGCTGAGCTGCTGCAGGCTGCTGGTCTAGAGGCAGTAGAGCAGCCCGTAGCTGAGGGTGAGGTGACAGGCGCTGTGGTCGATGCGCAACAGCAGCTGGTCGAAAGTGTGGTGAGTGTAAACAGTGGCGTAGAAATGATGGTGATGGACTCGCTGGACCCGGCCCTGCTGCAGATGAAGACAGAAGTGATGGAGGGTGCCATGGCTGCTGGTGTGAGTGTAGCCGGGGCAGCCCACGAGGCCACAGTCACCACAGTGGATGACACGCAGATCATCACCCTGCAGGTGGTCAATATGGAGGAACAACAACTGGGCCTGGGTGAACTGCAACTAGTGCAGGTGCCTGTTTCAGCCGTGCCCGTCACTGCCACCACCGTGGAAGAGCTGCAGGGAACGCTGGTGGATGCCACTGCCATGCCCAAAGATGGAGAGCCTGTCATCTGTCACACGCTGCCACTCCCAGAGGGCTTCCAGGTTGTGAAAGTAGGTGCCAATGGAGAAGTGGAGACTGTGGAGCAGGACGAGCTCCATGGTCACGAGGAGCAGTCTCTGCAGCagcaggaagaagaggagaTTCCTGAACCCCAGAATGATGACCCCACTTGGGCCAAGGATCCTGACTACACACCACCTGTCAAAAAGaccaaaaagacaaagaaaagcaaGCTGCGTTACAacacagaaggagagaaagacatGGATGTGTCTGTTTATGACTTTGAGGAGGAGCAGCAAGAAGGCCTGCTCTCAGAGGTTAATGCAGAGAAGGTTGTGGGCAACATGAAGCCTCCAAAGCCAACCAAAATCAAAAAGAAGGGTGTGAAGAAGACATTCCAGTGTGAGTTGTGTAGCTACACCTGCCCGAGACGCTCCAACCTCGACCGCCACATGAAGAGCCACACGGATGAGAGGCCGCACAAATGCCACTTGTGTGGACGTGCCTTCAGGACAGTCACCCTGCTGAGGAACcatctcaacacacacacagGCACCAGGCCCCACAAATGTACCGATTGTGACATGGCGTTTGTGACCAGTGGTGAGCTTGTGCGACACCGTCGCTATAAGCACACCCATGAGAAGCCCTTCAAGTGTTCCATGTGTGATTATGCTAGTGTGGAGGTCAGCAAGCTGAAGAGACACATTCGCTCTCATACCGGAGAGCGTCCATTCCAGTGTAGCTTGTGCAGCTATGCCAGCAGAGACACCTACAAGCTGAAGAGACACATGAGAACCCACTCAGGGGAGAAGCCGTATGAGTGCTACATCTGTCATGCGCGTTTCACCCAGAGTGGCACTATGAAGATGCACATCCTGCAGAAGCATACCGAGAATGTGGCAAAGTTCCACTGCCCCCACTGTGACACTGTCATTGCCCGCAAGAGTGACCTGGGTGTGCATCTGCGCAAGCAGCATTCCTACATCGAGCAAGGCAGGAAGTGCCGTTACTGTGAGGCTGTGTTTCATGAGCGCTATGCTCTCATCCAGCATCAAAAGTCCCACAAAAATGAGAAACGCTTCAAGTGTGACCAGTGTGACTATGCCTGCCGACAGGAGCGTCACATGGTGATGCATAAGCGCACCCACACTGGGGAAAAGCCATATGCCTGCAGCCACTGTGAGAAAACTTTCAGACAGAAACAACTCCTGGACATGCATTTTCGTCGTTACCATGACCCCAGCTTTGTCCCCACTTCCTTTGTGTGCTCCAAGTGTGGCAAGACTTTCACACGCAGGaacaCCATGGCCAGGCATGCTGAGAACTGTTCTGGACTGGaaggtggagatggagagaatggTACTCCGACCAAGAGGGGCCGTGGTGGCAGAAAGAGGAAGATGCGCTCGAGGaaggatgatgatgacagtgATGATCATGGAGAGCCTGACTTGGATGACattgatgaggaagaggaggaggaagacgCTCTTGATGATGTGGAGATGGAGGTGGAACAAGCTCCACCAACTGTCCCTGTCCCCGCCCCTGCTGAGCCGCCTGTCAAGAGGAAACGTGGCCGACCTCCCAAGAATCCTCCCAAAGCTTCCCCTGCTAAGAACTCAGCCATAGCACCTATTGCAACTGCCATTATCCAGGTGGAGGATGAGGGCACAGGAGCCATTGAGAACATCATAGTGAAGAAGGAGCAGGACGGCGTGGATTCTTCAGCGTCAGCATCAGCAGAGCCTGTGGTGGAGGAGATTGAAGCAGCAGAGGGAGGAGTGGAGGCAGAGCAGCTCTCTGTCCCTGAGGCCGCACCCAATGGAGACCTCACCCCTGAGATGATCCTCAGTATGATGGACCGGTGATGTGCTCTCCCAGGCCCAATATCCACACGCTCGTATGCGTCCTCTCCCATGCTGTCACCTCCCTGCCTCACAGAACACAGCCAAACTCCTTTCTGCTGTGTTCTCCTTCAGTTTCTGATCTGTGGAATGAAATATCCAATGGTCCTTTTTCACTCTTAATCTTcactttaatttgtgtttttttgttttttgttagttttttttttttttttgttacatgcTTTAGACTCATGATGTCAACTGTGCATGatgcttttttacattttcagttaTTAGTCTGATTATTGTCCCATGTATACCATCTAGTGTGTGGCACGGGTTGCAGAGATGCTTATGTGCAAATCCGGTGACTGTAGCTGGTTCCTCATATTTACTGTAGTGAACTGCGCACCTTTAGATGTTTTTGCCTAATTAACATGCCGATATTCTTTCAGCCTCCAATCTATTACATTACCATGGCAATATTTGAAAAGTAAAAATTGGTGGGCCTGGTCAAGCCTTGATATTTAGACTTTCTATCACTGTTGTAGAATGGGCATTTTACCCAACAAATATACTTTTAATATCTGACACATGTGGCAACTTTTATTCTCTGTTGCATTTCTTATTGCTTTCACTGATTACAGttgatgaaagagagaaaagcttAGGAATATAGATATAATTGTATGGTCTGGGAGGATTTCCATCCATCACGTTTGAAATAACTAAAAATCTGAAGTTGATAACATTGTACAAAAGAAGAGTAATCTTGGCAGGTCTTGCGTGTAAAtacgtttttttatttttgttttattatgaacattttaatccTTTTCAAGTGAATTGATGACATTGAATGCTGACacaatgacattttaaacagtAGTCATTTGAAAACATGCTCCTTAAGAATTTTAAATCTTGACAAGGGCGTAATGGCATAATATCATGTAAATGCCCCAATCTGTTTTTCCTTGGTCTTGTACAGCTTCTAATGTCACCTGGGTTTGTTTTCAGCTTTTCAGGGAGGGAATTAGATATTCTCCTTTATGATTGCTTAAGATAGGAAGATAAGAGCCTATAGCTTGTTTCTGTCAGAGCCCATTTCTATGTTGGTTTCGAGACTTATAAAGGTGAGCATAACTCTTGAGTGGTGTAGTGGTAACATGTAACTGGGCGACCAGGGTTTAGATCCTGACGCTgtaaaggaaggaaaaaggacAGGTGGGGAAAATTGAAAGTCGGCCAATGCTAGATGAGCACTGAGTCCTGTAACTTAGTGCAGGCTACGCCCTAACTCTCCGATTGGGTATGACTGCTGACATGATAACAGATCAGAAAAAGGTCTCTGTCCATAGCAGCTTTCTCACATTTTTGTTCAGATCACATACAGTCCACACAGCTTTAGCTTAATGAAGCCATTTTGATTCATTCTGTTATGGAAGAACTATTTGCATAGAGTTAGTTCATAAGAAAGTTCACATTTAGAAGGACTGTTattttctgaactttttttttaatttccagatTCAGAATGTTTTCCCTACTTGtactttttcatttacatttcttttcttttgttaagcTCTTAATTTTAGGTTGatgctttttccttttttgtaccTAGCAGTAACTGTGTGAATTTTACAGTGGTCAGAAAACCAAcatataaagacatttattATGGCTGGGTGGGGCTTTGAGGGAATAGGAAAAACGTGGAGAATGTATTGCTGTAcagctaataaaataatattgtcCTA
>XM_026927165.2
AAGCGGGAGAGGATTAAAACCAGCGAAGGGGAAGCACGCAGTTGTACTTCGCCTCGTACTAAAGGAAGAGCGGACCGCGGGCCTTGTGTCGAATTCAACGAGAGGATAAACAAGCAAAAGCAGAAGGAAGGTGAAAGATAGCTCATTCACCGAATGCAGAGAATTGAAGAGGCAGGAGAGTAGAGAGATGAAGTACACATTTTTGGTACAGGTAATACCCATGGAAGGGGGACCGACTGAAGCCGTGGTGGACGAGACGGGGGATGCCTTCAAAAGCAAGGATTGTAAGACGTATCAACGGCGGCGTGAGGACGAAGAGGTTGAAGCTGAGCTGCTGCAGGCTGCTGGTCTAGAGGCAGTAGAGCAGCCCGTAGCTGAGGGTGAGGTGACAGGCGCTGTGGTCGATGCGCAACAGCAGCTGGTCGAAAGTGTGGTGAGTGTAAACAGTGGCGTAGAAATGATGGTGATGGACTCGCTGGACCCGGCCCTGCTGCAGATGAAGACAGAAGTGATGGAGGGTGCCATGGCTGCTGGTGTGAGTGTAGCCGGGGCAGCCCACGAGGCCACAGTCACCACAGTGGATGACACGCAGATCATCACCCTGCAGGTGGTCAATATGGAGGAACAACAACTGGGCCTGGGTGAACTGCAACTAGTGCAGGTGCCTGTTTCAGCCGTGCCCGTCACTGCCACCACCGTGGAAGAGCTGCAGGGAACGCTGGTGGATGCCACTGCCATGCCCAAAGATGGAGAGCCTGTCATCTGTCACACGCTGCCACTCCCAGAGGGCTTCCAGGTTGTGAAAGTAGGTGCCAATGGAGAAGTGGAGACTGTGGAGCAGGACGAGCTCCATGGTCACGAGGAGCAGTCTCTGCAGCagcaggaagaagaggagaTTCCTGAACCCCAGAATGATGACCCCACTTGGGCCAAGGATCCTGACTACACACCACCTGTCAAAAAGaccaaaaagacaaagaaaagcaaGCTGCGTTACAacacagaaggagagaaagacatGGATGTGTCTGTTTATGACTTTGAGGAGGAGCAGCAAGAAGGCCTGCTCTCAGAGGTTAATGCAGAGAAGGTTGTGGGCAACATGAAGCCTCCAAAGCCAACCAAAATCAAAAAGAAGGGTGTGAAGAAGACATTCCAGTGTGAGTTGTGTAGCTACACCTGCCCGAGACGCTCCAACCTCGACCGCCACATGAAGAGCCACACGGATGAGAGGCCGCACAAATGCCACTTGTGTGGACGTGCCTTCAGGACAGTCACCCTGCTGAGGAACcatctcaacacacacacagGCACCAGGCCCCACAAATGTACCGATTGTGACATGGCGTTTGTGACCAGTGGTGAGCTTGTGCGACACCGTCGCTATAAGCACACCCATGAGAAGCCCTTCAAGTGTTCCATGTGTGATTATGCTAGTGTGGAGGTCAGCAAGCTGAAGAGACACATTCGCTCTCATACCGGAGAGCGTCCATTCCAGTGTAGCTTGTGCAGCTATGCCAGCAGAGACACCTACAAGCTGAAGAGACACATGAGAACCCACTCAGGGGAGAAGCCGTATGAGTGCTACATCTGTCATGCGCGTTTCACCCAGAGTGGCACTATGAAGATGCACATCCTGCAGAAGCATACCGAGAATGTGGCAAAGTTCCACTGCCCCCACTGTGACACTGTCATTGCCCGCAAGAGTGACCTGGGTGTGCATCTGCGCAAGCAGCATTCCTACATCGAGCAAGGCAGGAAGTGCCGTTACTGTGAGGCTGTGTTTCATGAGCGCTATGCTCTCATCCAGCATCAAAAGTCCCACAAAAATGAGAAACGCTTCAAGTGTGACCAGTGTGACTATGCCTGCCGACAGGAGCGTCACATGGTGATGCATAAGCGCACCCACACTGGGGAAAAGCCATATGCCTGCAGCCACTGTGAGAAAACTTTCAGACAGAAACAACTCCTGGACATGCATTTTCGTCGTTACCATGACCCCAGCTTTGTCCCCACTTCCTTTGTGTGCTCCAAGTGTGGCAAGACTTTCACACGCAGGaacaCCATGGCCAGGCATGCTGAGAACTGTTCTGGACTGGaaggtggagatggagagaatggTACTCCGACCAAGAGGGGCCGTGGTGGCAGAAAGAGGAAGATGCGCTCGAGGaaggatgatgatgacagtgATGATCATGGAGAGCCTGACTTGGATGACattgatgaggaagaggaggaggaagacgCTCTTGATGATGTGGAGATGGAGGTGGAACAAGCTCCACCAACTGTCCCTGTCCCCGCCCCTGCTGAGCCGCCTGTCAAGAGGAAACGTGGCCGACCTCCCAAGAATCCTCCCAAAGCTTCCCCTGCTAAGAACTCAGCCATAGCACCTATTGCAACTGCCATTATCCAGGTGGAGGATGAGGGCACAGGAGCCATTGAGAACATCATAGTGAAGAAGGAGCAGGACGGCGTGGATTCTTCAGCGTCAGCATCAGCAGAGCCTGTGGTGGAGGAGATTGAAGCAGCAGAGGGAGGAGTGGAGGCAGAGCAGCTCTCTGTCCCTGAGGCCGCACCCAATGGAGACCTCACCCCTGAGATGATCCTCAGTATGATGGACCGGTGATGTGCTCTCCCAGGCCCAATATCCACACGCTCGTATGCGTCCTCTCCCATGCTGTCACCTCCCTGCCTCACAGAACACAGCCAAACTCCTTTCTGCTGTGTTCTCCTTCAGTTTCTGATCTGTGGAATGAAATATCCAATGGTCCTTTTTCACTCTTAATCTTcactttaatttgtgtttttttgttttttgttagttttttttttttttttgttacatgcTTTAGACTCATGATGTCAACTGTGCATGatgcttttttacattttcagttaTTAGTCTGATTATTGTCCCATGTATACCATCTAGTGTGTGGCACGGGTTGCAGAGATGCTTATGTGCAAATCCGGTGACTGTAGCTGGTTCCTCATATTTACTGTAGTGAACTGCGCACCTTTAGATGTTTTTGCCTAATTAACATGCCGATATTCTTTCAGCCTCCAATCTATTACATTACCATGGCAATATTTGAAAAGTAAAAATTGGTGGGCCTGGTCAAGCCTTGATATTTAGACTTTCTATCACTGTTGTAGAATGGGCATTTTACCCAACAAATATACTTTTAATATCTGACACATGTGGCAACTTTTATTCTCTGTTGCATTTCTTATTGCTTTCACTGATTACAGttgatgaaagagagaaaagcttAGGAATATAGATATAATTGTATGGTCTGGGAGGATTTCCATCCATCACGTTTGAAATAACTAAAAATCTGAAGTTGATAACATTGTACAAAAGAAGAGTAATCTTGGCAGGTCTTGCGTGTAAAtacgtttttttatttttgttttattatgaacattttaatccTTTTCAAGTGAATTGATGACATTGAATGCTGACacaatgacattttaaacagtAGTCATTTGAAAACATGCTCCTTAAGAATTTTAAATCTTGACAAGGGCGTAATGGCATAATATCATGTAAATGCCCCAATCTGTTTTTCCTTGGTCTTGTACAGCTTCTAATGTCACCTGGGTTTGTTTTCAGCTTTTCAGGGAGGGAATTAGATATTCTCCTTTATGATTGCTTAAGATAGGAAGATAAGAGCCTATAGCTTGTTTCTGTCAGAGCCCATTTCTATGTTGGTTTCGAGACTTATAAAGGTGAGCATAACTCTTGAGTGGTGTAGTGGTAACATGTAACTGGGCGACCAGGGTTTAGATCCTGACGCTgtaaaggaaggaaaaaggacAGGTGGGGAAAATTGAAAGTCGGCCAATGCTAGATGAGCACTGAGTCCTGTAACTTAGTGCAGGCTACGCCCTAACTCTCCGATTGGGTATGACTGCTGACATGATAACAGATCAGAAAAAGGTCTCTGTCCATAGCAGCTTTCTCACATTTTTGTTCAGATCACATACAGTCCACACAGCTTTAGCTTAATGAAGCCATTTTGATTCATTCTGTTATGGAAGAACTATTTGCATAGAGTTAGTTCATAAGAAAGTTCACATTTAGAAGGACTGTTattttctgaactttttttttaatttccagatTCAGAATGTTTTCCCTACTTGtactttttcatttacatttcttttcttttgttaagcTCTTAATTTTAGGTTGatgctttttccttttttgtaccTAGCAGTAACTGTGTGAATTTTACAGTGGTCAGAAAACCAAcatataaagacatttattATGGCTGGGTGGGGCTTTGAGGGAATAGGAAAAACGTGGAGAATGTATTGCTGTAcagctaataaaataatattgtcCTA
>XM_026927168.2
GGGGAGTTTTGCAGGATCTTTAATCGGCCTCTAGGTGTCACGATGGGGCTCCTGGTCCAGGCGGCTGGCGGGGGGTGTTTGTCTCCCTCTATCGTTATCGAAAATTTAGCAAAAAACACTTATAACCCAGAAGTTCGGGGTTATGCCCGATTATTAAGTGCTATTGAACTTATATCAGACGGCATTTCGGCGAGATGCTTCATTTTTACACTTCGATGTTTGCTCCACTCTTTAGGCCAGGcgtccattttctttttcttctctttgtttCCGTGACAAAAACCCGCCGTTTCTAGATGAAGCAATAGCTTAGCCAACAAGCTAATACTACCTCTAAAAAGCGATAGTTTTGAGTCATGTAGTCGCACAAACACCACAAATACGACTATAATACAGAATAGAAATGTATATTCTTCTCTTTTGGTCGTTTTGTTGTCCAGACGGCGGTAACAAACTGGCTAACTCACTagcatagctagctagcagttTGTTGGCGCCCCTCCTCAACCGCGATTCAAACCTGCTCAGCCCTTCCTGGCCCATTACACAGCGCGCGCACATACACTCGAGCAGCCCGGTGATCTGCCCTACTGAAACTTCCAGCATGATGAGCTCGAGTTGTAGTTTCCCCCTCTTCATCTGTCCTCGAAATATATCTCAGTGTCGAGCAAAGTGAAATGCCGGaattgttagctagcttgcgGTTGTTTGCTAGCCAGCTTGTTGCGCAGATGAAAATCGGACGAGGAAGACGCGACGCTCAGTGAAGCCGACTGCTGATTTTAGGTAATACCCATGGAAGGGGGACCGACTGAAGCCGTGGTGGACGAGACGGGGGATGCCTTCAAAAGCAAGGATTGTAAGACGTATCAACGGCGGCGTGAGGACGAAGAGGTTGAAGCTGAGCTGCTGCAGGCTGCTGGTCTAGAGGCAGTAGAGCAGCCCGTAGCTGAGGGTGAGGTGACAGGCGCTGTGGTCGATGCGCAACAGCAGCTGGTCGAAAGTGTGGTGAGTGTAAACAGTGGCGTAGAAATGATGGTGATGGACTCGCTGGACCCGGCCCTGCTGCAGATGAAGACAGAAGTGATGGAGGGTGCCATGGCTGCTGGTGTGAGTGTAGCCGGGGCAGCCCACGAGGCCACAGTCACCACAGTGGATGACACGCAGATCATCACCCTGCAGGTGGTCAATATGGAGGAACAACAACTGGGCCTGGGTGAACTGCAACTAGTGCAGGTGCCTGTTTCAGCCGTGCCCGTCACTGCCACCACCGTGGAAGAGCTGCAGGGAACGCTGGTGGATGCCACTGCCATGCCCAAAGATGGAGAGCCTGTCATCTGTCACACGCTGCCACTCCCAGAGGGCTTCCAGGTTGTGAAAGTAGGTGCCAATGGAGAAGTGGAGACTGTGGAGCAGGACGAGCTCCATGGTCACGAGGAGCAGTCTCTGCAGCagcaggaagaagaggagaTTCCTGAACCCCAGAATGATGACCCCACTTGGGCCAAGGATCCTGACTACACACCACCTGTCAAAAAGaccaaaaagacaaagaaaagcaaGCTGCGTTACAacacagaaggagagaaagacatGGATGTGTCTGTTTATGACTTTGAGGAGGAGCAGCAAGAAGGCCTGCTCTCAGAGGTTAATGCAGAGAAGGTTGTGGGCAACATGAAGCCTCCAAAGCCAACCAAAATCAAAAAGAAGGGTGTGAAGAAGACATTCCAGTGTGAGTTGTGTAGCTACACCTGCCCGAGACGCTCCAACCTCGACCGCCACATGAAGAGCCACACGGATGAGAGGCCGCACAAATGCCACTTGTGTGGACGTGCCTTCAGGACAGTCACCCTGCTGAGGAACcatctcaacacacacacagGCACCAGGCCCCACAAATGTACCGATTGTGACATGGCGTTTGTGACCAGTGGTGAGCTTGTGCGACACCGTCGCTATAAGCACACCCATGAGAAGCCCTTCAAGTGTTCCATGTGTGATTATGCTAGTGTGGAGGTCAGCAAGCTGAAGAGACACATTCGCTCTCATACCGGAGAGCGTCCATTCCAGTGTAGCTTGTGCAGCTATGCCAGCAGAGACACCTACAAGCTGAAGAGACACATGAGAACCCACTCAGGGGAGAAGCCGTATGAGTGCTACATCTGTCATGCGCGTTTCACCCAGAGTGGCACTATGAAGATGCACATCCTGCAGAAGCATACCGAGAATGTGGCAAAGTTCCACTGCCCCCACTGTGACACTGTCATTGCCCGCAAGAGTGACCTGGGTGTGCATCTGCGCAAGCAGCATTCCTACATCGAGCAAGGCAGGAAGTGCCGTTACTGTGAGGCTGTGTTTCATGAGCGCTATGCTCTCATCCAGCATCAAAAGTCCCACAAAAATGAGAAACGCTTCAAGTGTGACCAGTGTGACTATGCCTGCCGACAGGAGCGTCACATGGTGATGCATAAGCGCACCCACACTGGGGAAAAGCCATATGCCTGCAGCCACTGTGAGAAAACTTTCAGACAGAAACAACTCCTGGACATGCATTTTCGTCGTTACCATGACCCCAGCTTTGTCCCCACTTCCTTTGTGTGCTCCAAGTGTGGCAAGACTTTCACACGCAGGaacaCCATGGCCAGGCATGCTGAGAACTGTTCTGGACTGGaaggtggagatggagagaatggTACTCCGACCAAGAGGGGCCGTGGTGGCAGAAAGAGGAAGATGCGCTCGAGGaaggatgatgatgacagtgATGATCATGGAGAGCCTGACTTGGATGACattgatgaggaagaggaggaggaagacgCTCTTGATGATGTGGAGATGGAGGTGGAACAAGCTCCACCAACTGTCCCTGTCCCCGCCCCTGCTGAGCCGCCTGTCAAGAGGAAACGTGGCCGACCTCCCAAGAATCCTCCCAAAGCTTCCCCTGCTAAGAACTCAGCCATAGCACCTATTGCAACTGCCATTATCCAGGTGGAGGATGAGGGCACAGGAGCCATTGAGAACATCATAGTGAAGAAGGAGCAGGACGGCGTGGATTCTTCAGCGTCAGCATCAGCAGAGCCTGTGGTGGAGGAGATTGAAGCAGCAGAGGGAGGAGTGGAGGCAGAGCAGCTCTCTGTCCCTGAGGCCGCACCCAATGGAGACCTCACCCCTGAGATGATCCTCAGTATGATGGACCGGTGATGTGCTCTCCCAGGCCCAATATCCACACGCTCGTATGCGTCCTCTCCCATGCTGTCACCTCCCTGCCTCACAGAACACAGCCAAACTCCTTTCTGCTGTGTTCTCCTTCAGTTTCTGATCTGTGGAATGAAATATCCAATGGTCCTTTTTCACTCTTAATCTTcactttaatttgtgtttttttgttttttgttagttttttttttttttttgttacatgcTTTAGACTCATGATGTCAACTGTGCATGatgcttttttacattttcagttaTTAGTCTGATTATTGTCCCATGTATACCATCTAGTGTGTGGCACGGGTTGCAGAGATGCTTATGTGCAAATCCGGTGACTGTAGCTGGTTCCTCATATTTACTGTAGTGAACTGCGCACCTTTAGATGTTTTTGCCTAATTAACATGCCGATATTCTTTCAGCCTCCAATCTATTACATTACCATGGCAATATTTGAAAAGTAAAAATTGGTGGGCCTGGTCAAGCCTTGATATTTAGACTTTCTATCACTGTTGTAGAATGGGCATTTTACCCAACAAATATACTTTTAATATCTGACACATGTGGCAACTTTTATTCTCTGTTGCATTTCTTATTGCTTTCACTGATTACAGttgatgaaagagagaaaagcttAGGAATATAGATATAATTGTATGGTCTGGGAGGATTTCCATCCATCACGTTTGAAATAACTAAAAATCTGAAGTTGATAACATTGTACAAAAGAAGAGTAATCTTGGCAGGTCTTGCGTGTAAAtacgtttttttatttttgttttattatgaacattttaatccTTTTCAAGTGAATTGATGACATTGAATGCTGACacaatgacattttaaacagtAGTCATTTGAAAACATGCTCCTTAAGAATTTTAAATCTTGACAAGGGCGTAATGGCATAATATCATGTAAATGCCCCAATCTGTTTTTCCTTGGTCTTGTACAGCTTCTAATGTCACCTGGGTTTGTTTTCAGCTTTTCAGGGAGGGAATTAGATATTCTCCTTTATGATTGCTTAAGATAGGAAGATAAGAGCCTATAGCTTGTTTCTGTCAGAGCCCATTTCTATGTTGGTTTCGAGACTTATAAAGGTGAGCATAACTCTTGAGTGGTGTAGTGGTAACATGTAACTGGGCGACCAGGGTTTAGATCCTGACGCTgtaaaggaaggaaaaaggacAGGTGGGGAAAATTGAAAGTCGGCCAATGCTAGATGAGCACTGAGTCCTGTAACTTAGTGCAGGCTACGCCCTAACTCTCCGATTGGGTATGACTGCTGACATGATAACAGATCAGAAAAAGGTCTCTGTCCATAGCAGCTTTCTCACATTTTTGTTCAGATCACATACAGTCCACACAGCTTTAGCTTAATGAAGCCATTTTGATTCATTCTGTTATGGAAGAACTATTTGCATAGAGTTAGTTCATAAGAAAGTTCACATTTAGAAGGACTGTTattttctgaactttttttttaatttccagatTCAGAATGTTTTCCCTACTTGtactttttcatttacatttcttttcttttgttaagcTCTTAATTTTAGGTTGatgctttttccttttttgtaccTAGCAGTAACTGTGTGAATTTTACAGTGGTCAGAAAACCAAcatataaagacatttattATGGCTGGGTGGGGCTTTGAGGGAATAGGAAAAACGTGGAGAATGTATTGCTGTAcagctaataaaataatattgtcCTA
>XM_034305345.1
GAGAGGATTAAAACCAGCGAAGGGGAAGCACGCAGTTGTACTTCGCCTCGTACTAAAGGAAGAGCGGACCGCGGGCCTTGTGTCGAATTCAACGAGAGGATAAACAAGCAAAAGCAGGAAGGTGAAAGATAGCTCATTCACCGAATGCAGAGAATTGAAGAGGCAGGAGAGTAGAGAGATGAAGTACACATTTTTGGTACAGGTAATACCCATGGAAGGGGGACCGACTGAAGCCGTGGTGGACGAGACGGGGGATGCCTTCAAAAGCAAGGATTGTAAGACGTATCAACGGCGGCGTGAGGACGAAGAGGTTGAAGCTGAGCTGCTGCAGGCTGCTGGTCTAGAGGCAGTAGAGCAGCCCGTAGCTGAGGGTGAGGTGACAGGCGCTGTGGTCGATGCGCAACAGCAGCTGGTCGAAAGTGTGGTGAGTGTAAACAGTGGCGTAGAAATGATGGTGATGGACTCGCTGGACCCGGCCCTGCTGCAGATGAAGACAGAAGTGATGGAGGGTGCCATGGCTGCTGGTGTGAGTGTAGCCGGGGCAGCCCACGAGGCCACAGTCACCACAGTGGATGACACGCAGATCATCACCCTGCAGGTGGTCAATATGGAGGAACAACAACTGGGCCTGGGTGAACTGCAACTAGTGCAGGTGCCTGTTTCAGCCGTGCCCGTCACTGCCACCACCGTGGAAGAGCTGCAGGGAACGCTGGTGGATGCCACTGCCATGCCCAAAGATGGAGAGCCTGTCATCTGTCACACGCTGCCACTCCCAGAGGGCTTCCAGGTTGTGAAAGTAGGTGCCAATGGAGAAGTGGAGACTGTGGAGCAGGACGAGCTCCATGGTCACGAGGAGCAGTCTCTGCAGCagcaggaagaagaggagaTTCCTGAACCCCAGAATGATGACCCCACTTGGGCCAAGGATCCTGACTACACACCACCTGTCAAAAAGaccaaaaagacaaagaaaagcaaGCTGCGTTACAacacagaaggagagaaagacatGGATGTGTCTGTTTATGACTTTGAGGAGGAGCAGCAAGAAGGCCTGCTCTCAGAGGTTAATGCAGAGAAGGTTGTGGGCAACATGAAGCCTCCAAAGCCAACCAAAATCAAAAAGAAGGGTGTGAAGAAGACATTCCAGTGTGAGTTGTGTAGCTACACCTGCCCGAGACGCTCCAACCTCGACCGCCACATGAAGAGCCACACGGATGAGAGGCCGCACAAATGCCACTTGTGTGGACGTGCCTTCAGGACAGTCACCCTGCTGAGGAACcatctcaacacacacacagGCACCAGGCCCCACAAATGTACCGATTGTGACATGGCGTTTGTGACCAGTGGTGAGCTTGTGCGACACCGTCGCTATAAGCACACCCATGAGAAGCCCTTCAAGTGTTCCATGTGTGATTATGCTAGTGTGGAGGTCAGCAAGCTGAAGAGACACATTCGCTCTCATACCGGAGAGCGTCCATTCCAGTGTAGCTTGTGCAGCTATGCCAGCAGAGACACCTACAAGCTGAAGAGACACATGAGAACCCACTCAGGGGAGAAGCCGTATGAGTGCTACATCTGTCATGCGCGTTTCACCCAGAGTGGCACTATGAAGATGCACATCCTGCAGAAGCATACCGAGAATGTGGCAAAGTTCCACTGCCCCCACTGTGACACTGTCATTGCCCGCAAGAGTGACCTGGGTGTGCATCTGCGCAAGCAGCATTCCTACATCGAGCAAGGCAGGAAGTGCCGTTACTGTGAGGCTGTGTTTCATGAGCGCTATGCTCTCATCCAGCATCAAAAGTCCCACAAAAATGAGAAACGCTTCAAGTGTGACCAGTGTGACTATGCCTGCCGACAGGAGCGTCACATGGTGATGCATAAGCGCACCCACACTGGGGAAAAGCCATATGCCTGCAGCCACTGTGAGAAAACTTTCAGACAGAAACAACTCCTGGACATGCATTTTCGTCGTTACCATGACCCCAGCTTTGTCCCCACTTCCTTTGTGTGCTCCAAGTGTGGCAAGACTTTCACACGCAGGaacaCCATGGCCAGGCATGCTGAGAACTGTTCTGGACTGGaaggtggagatggagagaatggTACTCCGACCAAGAGGGGCCGTGGTGGCAGAAAGAGGAAGATGCGCTCGAGGaaggatgatgatgacagtgATGATCATGGAGAGCCTGACTTGGATGACattgatgaggaagaggaggaggaagacgCTCTTGATGATGTGGAGATGGAGGTGGAACAAGCTCCACCAACTGTCCCTGTCCCCGCCCCTGCTGAGCCGCCTGTCAAGAGGAAACGTGGCCGACCTCCCAAGAATCCTCCCAAAGCTTCCCCTGCTAAGAACTCAGCCATAGCACCTATTGCAACTGCCATTATCCAGGTGGAGGATGAGGGCACAGGAGCCATTGAGAACATCATAGTGAAGAAGGAGCAGGACGGCGTGGATTCTTCAGCGTCAGCATCAGCAGAGCCTGTGGTGGAGGAGATTGAAGCAGCAGAGGGAGGAGTGGAGGCAGAGCAGCTCTCTGTCCCTGAGGCCGCACCCAATGGAGACCTCACCCCTGAGATGATCCTCAGTATGATGGACCGGTGATGTGCTCTCCCAGGCCCAATATCCACACGCTCGTATGCGTCCTCTCCCATGCTGTCACCTCCCTGCCTCACAGAACACAGCCAAACTCCTTTCTGCTGTGTTCTCCTTCAGTTTCTGATCTGTGGAATGAAATATCCAATGGTCCTTTTTCACTCTTAATCTTcactttaatttgtgtttttttgttttttgttagttttttttttttttttgttacatgcTTTAGACTCATGATGTCAACTGTGCATGatgcttttttacattttcagttaTTAGTCTGATTATTGTCCCATGTATACCATCTAGTGTGTGGCACGGGTTGCAGAGATGCTTATGTGCAAATCCGGTGACTGTAGCTGGTTCCTCATATTTACTGTAGTGAACTGCGCACCTTTAGATGTTTTTGCCTAATTAACATGCCGATATTCTTTCAGCCTCCAATCTATTACATTACCATGGCAATATTTGAAAAGTAAAAATTGGTGGGCCTGGTCAAGCCTTGATATTTAGACTTTCTATCACTGTTGTAGAATGGGCATTTTACCCAACAAATATACTTTTAATATCTGACACATGTGGCAACTTTTATTCTCTGTTGCATTTCTTATTGCTTTCACTGATTACAGttgatgaaagagagaaaagcttAGGAATATAGATATAATTGTATGGTCTGGGAGGATTTCCATCCATCACGTTTGAAATAACTAAAAATCTGAAGTTGATAACATTGTACAAAAGAAGAGTAATCTTGGCAGGTCTTGCGTGTAAAtacgtttttttatttttgttttattatgaacattttaatccTTTTCAAGTGAATTGATGACATTGAATGCTGACacaatgacattttaaacagtAGTCATTTGAAAACATGCTCCTTAAGAATTTTAAATCTTGACAAGGGCGTAATGGCATAATATCATGTAAATGCCCCAATCTGTTTTTCCTTGGTCTTGTACAGCTTCTAATGTCACCTGGGTTTGTTTTCAGCTTTTCAGGGAGGGAATTAGATATTCTCCTTTATGATTGCTTAAGATAGGAAGATAAGAGCCTATAGCTTGTTTCTGTCAGAGCCCATTTCTATGTTGGTTTCGAGACTTATAAAGGTGAGCATAACTCTTGAGTGGTGTAGTGGTAACATGTAACTGGGCGACCAGGGTTTAGATCCTGACGCTgtaaaggaaggaaaaaggacAGGTGGGGAAAATTGAAAGTCGGCCAATGCTAGATGAGCACTGAGTCCTGTAACTTAGTGCAGGCTACGCCCTAACTCTCCGATTGGGTATGACTGCTGACATGATAACAGATCAGAAAAAGGTCTCTGTCCATAGCAGCTTTCTCACATTTTTGTTCAGATCACATACAGTCCACACAGCTTTAGCTTAATGAAGCCATTTTGATTCATTCTGTTATGGAAGAACTATTTGCATAGAGTTAGTTCATAAGAAAGTTCACATTTAGAAGGACTGTTattttctgaactttttttttaatttccagatTCAGAATGTTTTCCCTACTTGtactttttcatttacatttcttttcttttgttaagcTCTTAATTTTAGGTTGatgctttttccttttttgtaccTAGCAGTAACTGTGTGAATTTTACAGTGGTCAGAAAACCAAcatataaagacatttattATGGCTGGGTGGGGCTTTGAGGGAATAGGAAAAACGTGGAGAATGTATTGCTGTAcagctaataaaataatattgtcCTA

Function

symbol description
ctcf Enables chromatin binding activity. Acts upstream of or within regulation of transcription by RNA polymerase II and skeletal muscle tissue development. Is expressed in brain; digestive system; immature eye; notochord; and somite. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 21. Orthologous to human CTCF (CCCTC-binding factor).

NR:

description
transcriptional repressor CTCF isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K23195 CTCF, CTCFL; transcriptional repressor CTCF

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927163.2 False 4341 mRNA 0.47 12 15291924 15299579
XM_026927165.2 False 4377 mRNA 0.47 13 15291976 15299579
XM_026927168.2 True 4952 mRNA 0.47 12 15292126 15299579
XM_034305345.1 False 4368 mRNA 0.47 13 15291982 15299579

Neighbor

gene id symbol gene type direction distance location
ripor1 fam65a coding upstream 474 15215050 ~ 15291450 (+)
ranbp10 ranbp10,LOC107583731 coding upstream 121005 15131265 ~ 15170919 (+)
necab2 necab2,LOC107672281,LOC106573751 coding upstream 322917 14885256 ~ 14969007 (+)
hydin hydin,LOC108264797,LOC108264078,LOC108264799,LOC108263932 coding upstream 414445 14784940 ~ 14877479 (+)
chka chka,LOC108424340,LOC107738676,LOC107726368 coding upstream 582497 14695777 ~ 14709427 (+)
cfdp1 cfdp1,LOC105419833 coding downstream 58824 15358403 ~ 15388947 (+)
bcar1 bcar1 coding downstream 95524 15395103 ~ 15467776 (+)
nudt21 nudt21,LOC107660760,LOC107690386 coding downstream 177887 15477466 ~ 15482137 (+)
gnao1a gnao1a,gnao1,LOC107715606,LOC108264367,LOC102196435,LOC100693875,LOC108249535,LOC107660763,LOC103367675 coding downstream 223212 15522791 ~ 15601904 (+)
cbfb cbfb,LOC107715210,LOC107715607 coding downstream 313701 15613280 ~ 15653287 (+)
G99819 NA non-coding upstream 68070 15223649 ~ 15223854 (+)
G99813 NA non-coding upstream 76208 15215391 ~ 15215716 (+)
G99786 NA non-coding upstream 111153 15176236 ~ 15180771 (+)
G99766 NA non-coding upstream 118489 15171332 ~ 15173435 (+)
G99705 NA non-coding upstream 233153 15055267 ~ 15058771 (+)
G99879 NA non-coding downstream 151240 15450819 ~ 15455039 (+)
G99854 NA non-coding downstream 168359 15467938 ~ 15468216 (+)
G99893 NA non-coding downstream 222441 15522020 ~ 15522724 (+)
LOC117597598 NA non-coding downstream 308391 15607970 ~ 15609103 (+)
G100079 NA non-coding downstream 371750 15671329 ~ 15734348 (+)
G99341 synm other upstream 767444 14520801 ~ 14524480 (+)
skor1b skor1 other upstream 1249472 14035228 ~ 14042452 (+)
smad3b smad3,LOC108264458,LOC108424035,LOC107740443,LOC107755098 other upstream 1335573 13932539 ~ 13956351 (+)
G98972 NA other upstream 1502534 13785095 ~ 13789390 (+)
G98946 megf11 other upstream 1576158 13691607 ~ 13715766 (+)
carmil2 carmil2,rltpr other downstream 903 15300482 ~ 15346146 (+)
G100306 NA other downstream 1049878 16349457 ~ 16349787 (+)
G100345 NA other downstream 1300678 16600257 ~ 16601067 (+)
rgma NA other downstream 1358022 16657601 ~ 16680793 (+)
LOC117597546 LOC107707548,LOC106676627,LOC106676599,LOC106675328,LOC106675542,LOC107675252 other downstream 2100847 17400426 ~ 17443468 (+)

Expression


Co-expression Network