bcl2l13 (bcl2l13)


Basic Information

Item Value
gene id bcl2l13
gene name bcl2l13
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 14366807 ~ 14384784 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927358.2
gaatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaagcacgACATTATTAGGGGACGGAACAGGGGGCAGGCTGAGGAACACGCATAACATAGCAGCCTGAAGTTAGCGGCTAACCACGTAGCTAACTAGCACTGGAGTACTTGACAAGCAGACAGTGCTAGGTACACATTTTCAACAACACGTTCAGTAacgggagtgtgtgtgacagtaagAACTCAGTAGTGTATGTGCCCTGTGAGTGTAACATTTCTCTTCAATGGCTGCCCCTGGCTCCACCAGCAATGTGCCGGAAGGATTCCACTACGAGACCAAATACGTCCTCCTGTCCTACCTCAGCCTGCCCCCGAGACCACAGGCCAGGCCTGAGGAAGGAGCATCTGGACAAGCTGCACAAGAAGCAGCTGTGGACAAGACCAGCAGGATGAAGGAGCAGATTGAGGAACAGCTAAAGCAGCTAGAAGAAGAAATCACTGCCTcttttCCAAGTACAGGCTTTGATCGGCACACATCCCCAGTGTTCAGTCCAGCGAATCCTGAGAACACTATAGAGGACAGCCTGGCCGTGCTGGGGGACCGTGTTGCACAAGTGCTGGACACACATCTGACCTTGGCAGCACAGACACTTCTCAGTGGgcaGCTGAACTATGAAGATTTCCAAAATGCAGTGAAGGAGATTTCCTCCCATTCTGAAGGAGGCTGGAGCAAGGTTTTGGTACCTTTAGTGTTACTGCAAGCCCTGCATTGTAAGGGTCAACCGCTGGCCTCTCTACTTTCCCTGGGTGAGCGTTACTTAGTTGAGGTAGAGGCAGACTTCATCATCCAGCAGGGTGGATggAGTGCAGTGTTTGGCCTGGAGGATGTGGAGGAACCAGGCGTGCTCATAGCTGAAGACAGTAACGATATCTACATCCTGTCAGGGGAGCAAGGCCGCGAGCAGCTGAGCCCCCCTGAGTCACTGCTCATCAGTGTGGCAGATAGCAGCGGTCTGAGCTCCTGGCACACAGAGAGTTTGCCCGTATCAATGAGTGGCCACGAATCCTGGGCTCAGGTTGGCACCATGGAGCCAGAGGATGCCAAGAGTGTGGACAGTGGTGAGGGCGTGGCCTCAGCCGAGGAGCGCAGTGAGAACAACTCGTCCAACTCGGACATTGTGCACGTGGAGCGTGAGGAGGCCGAGCTTCTGGAGGAGGGAGAAGCTGTAGAAGAGGGAGAGCTGCAGGAGAGCGTGCTCAGTGTCCTAGGCACTGAAAGCGAGCTGGAGGCCCTCAGAGAGGAGCTTAGAAGAGAAGCTTCATCTCCACAACAGCCAGTTTCAGAAGCACCAGAGTCACTGATGTCCCTAGAGGAGCAGATTGTCATCCTGGAGGCACCTCCTAGCCTGGTTGCTGCTGTTCCACCAGTTGATATAGAGCCAAAGTCCCTTACTTCTTCATGGCCAACTGTCATTGCTGAAGTTCCAATTAATGTACAGCAGGAATCTCTCTCGCCTTCATCCTACACTGTCATCACTGATGCTCCAGTTGAAGTAGAACCAGAATACTTTGCGTCTTCATCCTCTACTATCATTGCTGATGCTCCAGTTGATGTGAAGCTGGAATGTTCTGTTCATCCTTCCCTTCCTATTGCTGCTACACCCCAAGTGCTTGACCCTGAACCTGAGCCTCAGTCAGCTCAGCCAGAACCTGTTCTAGCTCCTGTGGAGCCAAAGATTCTAAGAACAGTTCAAGAACCAGAAGCTAAATCTGAGCCACAGCCTGAAGCTGTCCAAGTAGCTCCAGTACATGAGATGCTACCACAAGAGCTACAAGCAGAGGTTGTACAGGCCATTACAGCCCAGGAGCCACCTCTTTTACCCCCAGCTCCAGCACAGGAGATACCATCACTGGAACCACAGATTGTAAAGGAGACGTCTGCTCCAACCCAGGTTCCTCTTGTTTTACCTTCTGCTGCAGCTCCAGAACAGGAAATACTGCCACAGGAGCTACAGCCTGTACACACAGCATCTGTTCCAGCTCAGGAACCACCTGCAGCTCCAGCACGCACAGAGCCTGTAGCAGAGCCTGTGTCCTCTGAGCTTCCAGTTCTTCTGTATGGTGGTGCTGCACTGGCAGCCATTGCTGCTTTGGTGGCCTATGGAGCTCTGGCTTACAGGAAGAAGTATTAGGAAGTGAACATCTCGCCCTTCCCCGTGACCACACCACATCAGTGACCCTTTTCAGGAACTGGGGCCATTGTGCTGCCAAAAGTTGTGGGGAAATTCAGTTCTCCTGTCTGCGCCATGCTAAGTTTTGTCGATTCTCTTCCAAGTTcctgtttttttgggggggatttttttttgggtttaaatttttttttttcccctgagttTTCGTTGTTTCATATTATTGTTTCAGTGAACCACTACTGAGCCTCTGAACCACTACTGAGGCATATGCATTGTCAATTTGATGTTCATTTCACATTCTCATATACAGTTCTCATACGCTTGTTAATTTGTCTTAGGTTTTAAATTCTGTAAGACTGACATGTGGGAAATCATGGTATCATTTTACCAGTTTTTAGAAGCAGGTAACTGTTATTCAAGAAGAATGGACTTGATTTGGTGTTTTGAAAACAATTATGatttgccaaataaataaaaggtgcaCACCTCAAATTAT
>XM_026927359.2
TGGTTAGCTAGCTGTGTTGAGGCATGCTAATGTAGGAGGAGTGGTCTGTGGGAGAAGATCACAGCGCGCGCCCTTGTACACAAGGTTCTAATGAATGATCTGCAGTTTGGAGAGAGGAGCAGTGCAGTgctaaaagAACTCAGTAGTGTATGTGCCCTGTGAGTGTAACATTTCTCTTCAATGGCTGCCCCTGGCTCCACCAGCAATGTGCCGGAAGGATTCCACTACGAGACCAAATACGTCCTCCTGTCCTACCTCAGCCTGCCCCCGAGACCACAGGCCAGGCCTGAGGAAGGAGCATCTGGACAAGCTGCACAAGAAGCAGCTGTGGACAAGACCAGCAGGATGAAGGAGCAGATTGAGGAACAGCTAAAGCAGCTAGAAGAAGAAATCACTGCCTcttttCCAAGTACAGGCTTTGATCGGCACACATCCCCAGTGTTCAGTCCAGCGAATCCTGAGAACACTATAGAGGACAGCCTGGCCGTGCTGGGGGACCGTGTTGCACAAGTGCTGGACACACATCTGACCTTGGCAGCACAGACACTTCTCAGTGGgcaGCTGAACTATGAAGATTTCCAAAATGCAGTGAAGGAGATTTCCTCCCATTCTGAAGGAGGCTGGAGCAAGGTTTTGGTACCTTTAGTGTTACTGCAAGCCCTGCATTGTAAGGGTCAACCGCTGGCCTCTCTACTTTCCCTGGGTGAGCGTTACTTAGTTGAGGTAGAGGCAGACTTCATCATCCAGCAGGGTGGATggAGTGCAGTGTTTGGCCTGGAGGATGTGGAGGAACCAGGCGTGCTCATAGCTGAAGACAGTAACGATATCTACATCCTGTCAGGGGAGCAAGGCCGCGAGCAGCTGAGCCCCCCTGAGTCACTGCTCATCAGTGTGGCAGATAGCAGCGGTCTGAGCTCCTGGCACACAGAGAGTTTGCCCGTATCAATGAGTGGCCACGAATCCTGGGCTCAGGTTGGCACCATGGAGCCAGAGGATGCCAAGAGTGTGGACAGTGGTGAGGGCGTGGCCTCAGCCGAGGAGCGCAGTGAGAACAACTCGTCCAACTCGGACATTGTGCACGTGGAGCGTGAGGAGGCCGAGCTTCTGGAGGAGGGAGAAGCTGTAGAAGAGGGAGAGCTGCAGGAGAGCGTGCTCAGTGTCCTAGGCACTGAAAGCGAGCTGGAGGCCCTCAGAGAGGAGCTTAGAAGAGAAGCTTCATCTCCACAACAGCCAGTTTCAGAAGCACCAGAGTCACTGATGTCCCTAGAGGAGCAGATTGTCATCCTGGAGGCACCTCCTAGCCTGGTTGCTGCTGTTCCACCAGTTGATATAGAGCCAAAGTCCCTTACTTCTTCATGGCCAACTGTCATTGCTGAAGTTCCAATTAATGTACAGCAGGAATCTCTCTCGCCTTCATCCTACACTGTCATCACTGATGCTCCAGTTGAAGTAGAACCAGAATACTTTGCGTCTTCATCCTCTACTATCATTGCTGATGCTCCAGTTGATGTGAAGCTGGAATGTTCTGTTCATCCTTCCCTTCCTATTGCTGCTACACCCCAAGTGCTTGACCCTGAACCTGAGCCTCAGTCAGCTCAGCCAGAACCTGTTCTAGCTCCTGTGGAGCCAAAGATTCTAAGAACAGTTCAAGAACCAGAAGCTAAATCTGAGCCACAGCCTGAAGCTGTCCAAGTAGCTCCAGTACATGAGATGCTACCACAAGAGCTACAAGCAGAGGTTGTACAGGCCATTACAGCCCAGGAGCCACCTCTTTTACCCCCAGCTCCAGCACAGGAGATACCATCACTGGAACCACAGATTGTAAAGGAGACGTCTGCTCCAACCCAGGTTCCTCTTGTTTTACCTTCTGCTGCAGCTCCAGAACAGGAAATACTGCCACAGGAGCTACAGCCTGTACACACAGCATCTGTTCCAGCTCAGGAACCACCTGCAGCTCCAGCACGCACAGAGCCTGTAGCAGAGCCTGTGTCCTCTGAGCTTCCAGTTCTTCTGTATGGTGGTGCTGCACTGGCAGCCATTGCTGCTTTGGTGGCCTATGGAGCTCTGGCTTACAGGAAGAAGTATTAGGAAGTGAACATCTCGCCCTTCCCCGTGACCACACCACATCAGTGACCCTTTTCAGGAACTGGGGCCATTGTGCTGCCAAAAGTTGTGGGGAAATTCAGTTCTCCTGTCTGCGCCATGCTAAGTTTTGTCGATTCTCTTCCAAGTTcctgtttttttgggggggatttttttttgggtttaaatttttttttttcccctgagttTTCGTTGTTTCATATTATTGTTTCAGTGAACCACTACTGAGCCTCTGAACCACTACTGAGGCATATGCATTGTCAATTTGATGTTCATTTCACATTCTCATATACAGTTCTCATACGCTTGTTAATTTGTCTTAGGTTTTAAATTCTGTAAGACTGACATGTGGGAAATCATGGTATCATTTTACCAGTTTTTAGAAGCAGGTAACTGTTATTCAAGAAGAATGGACTTGATTTGGTGTTTTGAAAACAATTATGatttgccaaataaataaaaggtgcaCACCTCAAATTAT
>XM_034305263.1
TTTGAGTAAGATAAACAAGTTGCTCgtgcttggattttttttaaacttctttattCGACTTAAGTTCCTCTCAGGCGTTTCTATGGacaagtgaatgaatgaaagcttaTGTGCAGCTTAGAACTCAGTAGTGTATGTGCCCTGTGAGTGTAACATTTCTCTTCAATGGCTGCCCCTGGCTCCACCAGCAATGTGCCGGAAGGATTCCACTACGAGACCAAATACGTCCTCCTGTCCTACCTCAGCCTGCCCCCGAGACCACAGGCCAGGCCTGAGGAAGGAGCATCTGGACAAGCTGCACAAGAAGCAGCTGTGGACAAGACCAGCAGGATGAAGGAGCAGATTGAGGAACAGCTAAAGCAGCTAGAAGAAGAAATCACTGCCTcttttCCAAGTACAGGCTTTGATCGGCACACATCCCCAGTGTTCAGTCCAGCGAATCCTGAGAACACTATAGAGGACAGCCTGGCCGTGCTGGGGGACCGTGTTGCACAAGTGCTGGACACACATCTGACCTTGGCAGCACAGACACTTCTCAGTGGgcaGCTGAACTATGAAGATTTCCAAAATGCAGTGAAGGAGATTTCCTCCCATTCTGAAGGAGGCTGGAGCAAGGTTTTGGTACCTTTAGTGTTACTGCAAGCCCTGCATTGTAAGGGTCAACCGCTGGCCTCTCTACTTTCCCTGGGTGAGCGTTACTTAGTTGAGGTAGAGGCAGACTTCATCATCCAGCAGGGTGGATggAGTGCAGTGTTTGGCCTGGAGGATGTGGAGGAACCAGGCGTGCTCATAGCTGAAGACAGTAACGATATCTACATCCTGTCAGGGGAGCAAGGCCGCGAGCAGCTGAGCCCCCCTGAGTCACTGCTCATCAGTGTGGCAGATAGCAGCGGTCTGAGCTCCTGGCACACAGAGAGTTTGCCCGTATCAATGAGTGGCCACGAATCCTGGGCTCAGGTTGGCACCATGGAGCCAGAGGATGCCAAGAGTGTGGACAGTGGTGAGGGCGTGGCCTCAGCCGAGGAGCGCAGTGAGAACAACTCGTCCAACTCGGACATTGTGCACGTGGAGCGTGAGGAGGCCGAGCTTCTGGAGGAGGGAGAAGCTGTAGAAGAGGGAGAGCTGCAGGAGAGCGTGCTCAGTGTCCTAGGCACTGAAAGCGAGCTGGAGGCCCTCAGAGAGGAGCTTAGAAGAGAAGCTTCATCTCCACAACAGCCAGTTTCAGAAGCACCAGAGTCACTGATGTCCCTAGAGGAGCAGATTGTCATCCTGGAGGCACCTCCTAGCCTGGTTGCTGCTGTTCCACCAGTTGATATAGAGCCAAAGTCCCTTACTTCTTCATGGCCAACTGTCATTGCTGAAGTTCCAATTAATGTACAGCAGGAATCTCTCTCGCCTTCATCCTACACTGTCATCACTGATGCTCCAGTTGAAGTAGAACCAGAATACTTTGCGTCTTCATCCTCTACTATCATTGCTGATGCTCCAGTTGATGTGAAGCTGGAATGTTCTGTTCATCCTTCCCTTCCTATTGCTGCTACACCCCAAGTGCTTGACCCTGAACCTGAGCCTCAGTCAGCTCAGCCAGAACCTGTTCTAGCTCCTGTGGAGCCAAAGATTCTAAGAACAGTTCAAGAACCAGAAGCTAAATCTGAGCCACAGCCTGAAGCTGTCCAAGTAGCTCCAGTACATGAGATGCTACCACAAGAGCTACAAGCAGAGGTTGTACAGGCCATTACAGCCCAGGAGCCACCTCTTTTACCCCCAGCTCCAGCACAGGAGATACCATCACTGGAACCACAGATTGTAAAGGAGACGTCTGCTCCAACCCAGGTTCCTCTTGTTTTACCTTCTGCTGCAGCTCCAGAACAGGAAATACTGCCACAGGAGCTACAGCCTGTACACACAGCATCTGTTCCAGCTCAGGAACCACCTGCAGCTCCAGCACGCACAGAGCCTGTAGCAGAGCCTGTGTCCTCTGAGCTTCCAGTTCTTCTGTATGGTGGTGCTGCACTGGCAGCCATTGCTGCTTTGGTGGCCTATGGAGCTCTGGCTTACAGGAAGAAGTATTAGGAAGTGAACATCTCGCCCTTCCCCGTGACCACACCACATCAGTGACCCTTTTCAGGAACTGGGGCCATTGTGCTGCCAAAAGTTGTGGGGAAATTCAGTTCTCCTGTCTGCGCCATGCTAAGTTTTGTCGATTCTCTTCCAAGTTcctgtttttttgggggggatttttttttgggtttaaatttttttttttcccctgagttTTCGTTGTTTCATATTATTGTTTCAGTGAACCACTACTGAGCCTCTGAACCACTACTGAGGCATATGCATTGTCAATTTGATGTTCATTTCACATTCTCATATACAGTTCTCATACGCTTGTTAATTTGTCTTAGGTTTTAAATTCTGTAAGACTGACATGTGGGAAATCATGGTATCATTTTACCAGTTTTTAGAAGCAGGTAACTGTTATTCAAGAAGAATGGACTTGATTTGGTGTTTTGAAAACAATTATGatttgccaaataaataaaaggtgcaCACCTCAAATTAT

Function

symbol description
bcl2l13 Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be located in membrane. Predicted to be active in mitochondrion. Predicted to be integral component of membrane. Orthologous to human BCL2L13 (BCL2 like 13).

NR:

description
bcl-2-like protein 13

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process

KEGG:

id description
K15485 BCL2L13, BCL-RAMBO; Bcl-2-like protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927358.2 True 2666 mRNA 0.50 7 14366807 14384784
XM_026927359.2 False 2584 mRNA 0.50 7 14366807 14384484
XM_034305263.1 False 2569 mRNA 0.49 7 14366807 14384310

Neighbor

gene id symbol gene type direction distance location
ighmbp2 ighmbp2 coding downstream 42369 14315835 ~ 14324438 (-)
LOC113534338 NA coding downstream 72367 14289025 ~ 14294440 (-)
paqr5a paqr5,LOC108263988 coding downstream 90156 14266084 ~ 14276651 (-)
kif23 kif23,LOC107672274,LOC107686310 coding downstream 101544 14256547 ~ 14265263 (-)
aagab aagab coding downstream 405421 13956433 ~ 13961386 (-)
wnt2 wnt2,LOC107708232,LOC107738769,LOC107596948,LOC107660945 coding upstream 5115 14389899 ~ 14398268 (-)
asz1 asz1 coding upstream 17084 14401868 ~ 14422777 (-)
cttnbp2 cttnbp2 coding upstream 69553 14454337 ~ 14502230 (-)
synm synm coding upstream 135883 14520667 ~ 14529857 (-)
igf1ra igf1r,igf1ra,LOC107672255,LOC107596941 coding upstream 151295 14536079 ~ 14629951 (-)
G99401 wee2 non-coding downstream 11188 14349718 ~ 14355619 (-)
G99408 NA non-coding downstream 32673 14328927 ~ 14334134 (-)
G99202 NA non-coding downstream 331266 14035267 ~ 14035541 (-)
G99187 smad3b,smad3,LOC108264458,LOC107738715,LOC108424035,LOC107686302,LOC107672260 non-coding downstream 416086 13950147 ~ 13950721 (-)
G99188 smad3,LOC108264458,LOC107686302,LOC108424035 non-coding downstream 419896 13944751 ~ 13946911 (-)
G99433 NA non-coding upstream 64072 14448856 ~ 14453107 (-)
LOC113534271 NA non-coding upstream 126140 14510924 ~ 14519784 (-)
G99453 NA non-coding upstream 149036 14533820 ~ 14536010 (-)
G99482 NA non-coding upstream 216439 14601223 ~ 14603472 (-)
G99493 NA non-coding upstream 263294 14648078 ~ 14648993 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other downstream 19799 14335936 ~ 14347008 (-)
c6h15orf39 c4h15orf39 other downstream 804233 13550680 ~ 13562574 (-)
G98770 NA other downstream 1314496 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 1942829 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 1961526 12396507 ~ 12405281 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 962382 15347166 ~ 15357563 (-)
G101178 NA other upstream 3802663 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 5595285 19980069 ~ 19980259 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 6011082 20395866 ~ 20416574 (-)
G102566 NA other upstream 6568818 20953602 ~ 20966910 (-)

Expression


Co-expression Network