nlrc5 (nlrc5)


Basic Information

Item Value
gene id nlrc5
gene name nlrc5
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 12837299 ~ 12858534 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927462.2
ACCATTTCCCCAGAATCAAGGATAGCACAGGATAGCAGTTTACGATAATAACTTAGCTTCATTTAGCTACATTAGGTTATATGTGTTGGGCACCATTCTAAAATACATACTTGCTTAACTTACAGTggacattttaaattcatagtCATCGAGGAGAGAATTATTTTTCCTGAATCCTCCAAACCGCAAGCGTTGttaactttcactttcacttcacCATCACGCCAGTGCGATGCCATAGATCAGGTTAACAGGATACCAGGTTATCTGAGCAGATGGATGAAGATGGAGGAGCTGGACCTGGAGGAGGACGTTCGGGTTGTGGTGGCCCAGGAGGCCACCGCAATAGTGGACATTTTGTGTAAGCAGAGAAATAATGTTCTACAGCAGATCTATGCCTTGGTGGAATCACGGACTCGAGAGCAGCTACAGCACTCGCCCAACCTCAGGGAATCTATCTCAGGTGTTGTGGATTACTTCAAAACTTCAAACCAACAGATATGCCGCCATTTCCTGTACACTATTTGGGCATTCTGTGAGGACATTCCCTTAGAACTGGAGATACGGATTTTAAGCGTAGCAGGATCTTCAACTGGAGCGTTGGTGAACAACACTCATCTGCCAGATATTGAAAATTCCCCTCAATCACCTAATGCAAAACGTGCATGTCTAGACCAGGTGCAGAATTACACAAATGCTGTTAAGAGTTTTCTGCAAAAGAAATTTGAGAAGGTGACaaaagatgtgaagaaaaaggTTTGCCTAGACAAGACATGGCTGTGTTGGAGGACACAGAAATATGCAAGGGTGAGAGACAGACCAGCAAAAACTCAGGAAGGGGAAGAGGTTTCATCAGAGCATAAAGAGTCAGTTGAGGCTCTGTTGAAGAAAACAGGCAGAGTGGTAATGCTATCAGGTCAGGCTGGTTCCGGTAAAACCCTGCTGATGCATTGCCTAAGCCACCACTGGGCTCAGGGCTCTTACCCCTCTATCAAGCTACTGTTCCTGCTGGAGTTCCGCCAGCTCAACCTTGTTTCACAGCCATTGTCTCTGAAAGAGCTGTTGTTTcgtttctttcttcctcctgAGGAAGACAATGAGCAAAGTGAAGCAGTGCTCAGTTACGTTCTTACCAACCCTGAGAAAATTTGCTTTATATTTGATGGATATGATGAGTTTGGGGCAAGATTTACAGACCCAAAAGAGCTTGTTGACTCTGTAAACCCTACCCAGCAGCTGCCATTGGCTGATCTCCTCTCTGCACTATGTAGCTCCAAGATCCTGCCCGGGTGCACAGTGCTGGTCACTTGTAGGCCACGGGATGTTTTTGACCTATTTGGAAGTTCTGGTTATTTTGTAGCAGAGCTGCTTGGGTTCAATCAACAACGTGTGAAGGAATACACTGAGGACTACTTCCATGAAAAGGGAAGTGAAATTAAAGAAAGAGCAGTTAACTTGCTGATGGACAACCATCATCTGCTCTCCATGTCCCATGTTCCAGGATTATGTCATGTTTGCTGTGTCTGCTTAGATCATTTCCTCTCCAGTGATATGTCTCGGCAACCTGGCACTCAACTACCTACTTCCTTGACCCAAATCTACCTCCACAtcctttctgcttttattaGTCGTTGCCAGGGTTGTGGATCTTCTGATAACCATACACCATTACTTCAGAGGTATAGGGATCAAATTGCTATATTGAGTAAGCTTGCAATGGACGGCCTGGAGAACAGCCGTATAGTATTCTCGGCAAATGAACTGTCTCCAGAGCTAATGAACTTTGGTGCCAATGCTGGAATTCTGTCCCGTGTGGATCTTACTTGTGCAGATGGATCGCGAAGTCTGGGCTGTGCCTTTACGCACCTAACCATGCAAGAGTTCATGGCTGCTTTGCATCTTATGACGAACCCCGATATCACAGAGGCACAGCTCAAGAAGAAGCTTAACTTGAAAAGCCGATGGACTGCTAAGACTGATCCAAAAACTGTGTTCACAGACTCCCTtcacctgtatgtgtgtgggctTGCTGCAGAAGCCTGCACTTTAAATCTCGTCCTGCTGGAAGGCAGTGAGAATGCCAGAACTATTGTGCTACAGCGACAAGATGCCATACTTAAGATTTTGCAGCGCTTTGTGGTTAGTGGTCGTCAAACAGGTCCCAAGATTATTGAGCTCTGCCGTTGTGCCcatgaaacacaaaacattgaTTTGGCCAGAGCTGTTGGGTCAAGAGATCGGTTTGAGCTGCGGAATATAAGACTCAACCCTGTGGACATTGATGCCTTGGCATTTGTAACTTCATCTGCAAATCAGATGGTATGTCTGGACTTTGGTGCCTGTTCCATTGAACCAGAGTGTTTAAACATCATTCCCAACTGCAAGAACCTGGAAACTCTCATttttcgTAGCCGTAAATATGATGACAAGTTTGCAGAGGCTTTGTCTGGTATTCTGCCCAAACTCCAGAGCCTGAAGCAGTTAGACTTTATCGGTGGTGGTCTCACTAATATCGGAGCTGCTAAACTTTTCAAGGCTTTGGAGTGCTGCCCGCAAATCACAAATCTCAAtgtcagtgataaCTACCTATCAGATGAGAGTGTAAGAAAGATCACAGAGATGATTCCCAAACTGGCTAAACTCACGTCTATCATGCTGGGGAAGAACAACATTTCCAGAAAAGGAATATTTATACTCATTGAAAAAATGGCAGCTTTTCTGAACATTAAGAAAGTCTATGCAAAtgcaaaaaaaaaggaaatcaatGTTCTGTTCTCCCCGAACACCCCAAACAGTGCAAGCACAGATGACCTAAAGAACGCTGAAGAATCAAAAGAGCTAATctTGAACGACTGGAATCTCAAATGGAGGAATGTGATCAACCTGTGCAATATGCTCAAAGGCTCCTCTCTCACTGTCCTAAAtttgtCGCAGAACTCACTGGGTAACCAAGGTCTAAAGAAGCTACTCGAAAATCTGCCTACTCTTGACACCATTCAGGAAATCAATGTCAGTGACAATGAAGTGGATATGGATGGGGTTGTGCTTCTCTCAACTTATCTCTGTACTCTCAAAGACCTGACTGAGATAGAAGCTAGCCACAATGGAAACAAGAAACTGGTCTTGACATTTAGCTGTAGCAGAAGTGATGCAATAAACCAGTTAACCCCAGATGGGCATGATATTCTGCACAAGAAACTCAGCTTAACGCAATGTGATATAAGCCCTACTGACATGAACAAGCTGTGTAAGAATCTGATAAAGTGCCCAGATCAGCTAGACCTGGATTTCTCCTGTGGAACATTAACGGATGAGTCTATCGAGAAGCTACTAAGGTTCCTTCCGGACATGTCATCTCTCAGTCTACTAAATTTAAGTCACATCAAGATGTCAACAGACAGTGCTTTGTTATTGGTCCAACTGCTTTCTGACTGCCAGCGCACTTCCTCTGTGGAACTCAGACCACTGGGAGAAGCATTCGTCAAGTTCCTCCAAGTCAAATCAGAAGCCGCAACATGCAAGTTTAACCAATATAATCTGAGCAGTGCCAGTCTGGCAAAGCTGTGTGGTATACTGGAGAATTGTCATCATCTGTCTGATCTGGATCTGTCTAGTAACTTCCTTAAAGACGAGGATGTGAAGACCTTTGTTCAATTAATGCCCAAACTTCAGATCTCCAGCTCAGTGAGCCTCAACGATAACAGTCTAACCGAAGTAGGGGCGCTCTACCTGCTGAACCTAATGAACACATGTGAAAGGGTGGCTGCTGTGGAAGTGAGTCTCGGAAAGGAGGAGCAGCAAGCTCTGATTCGCTTTGTTCAGAAGAATTTTACAGACAAAACTTTCAGTCTGAGGCATTGCTGTTTTGAGTCAAGCCATTTGCAAAGTCTTGTGAAAATACTCACCAGTTGTCCCAAGCTTAAACTAGAGTTATCATCATGCACTGTGCAAAGTCAATATCTGTACTTTCTACTGAACAGTTTGGCTACGCTGAAATCAGTCCAAACTTTAGAGCTAAGAAACAATTCTTTCAATGCTGAGGCGATTAAGCATTTGGTTACTGAGTTGTGTAGGGATTCTAATCCCAGAACAATTCGGATAATGGAGCCATGGATTAAAGGGGAAGTTGCAGTTGGCCTTGTGGCATGCTGCCTGCAATTGAATCCATACATAAAGGAGATCAGAGTTGAAAAAACATGGCTGAACCTTTCTATTGAAAGCCTCACTTCTGCCACAGTCCCTAATGTGAATGGGAATCCTTTCGTGTCTGCTGTGCACTCTATAAGCTTTGATGACTGTGAAGTTGAGGGGCAACACTTATCCTCACTGCAATCTACTGTCCAAAAGTGTCCCTCTCTGCGGGAGTTACATTTCTCACAGCTGACGATGGGTGCAGATGGTGCAGCGTTTCTCTCTTCAGTTCTTCCCTTGCTGGAGAATCTCAAGATCCTCAGTCTTAACTCCAAAGGAGAAACAGAAGACGAAGCAGTAATATTTGCATTACGGCATACACAAAAGCACCTGGAACGGCTGAGCTTGTCGCATCATGTAATCAAAGACAGTGGAGCTGCAGTACTAGGGAATGCCCTTCAGGGTTTGACAAGAATGCGTTCACTCAGCCTCTCACAGTGCTTGGATTGCACAGCAACAGGAGGGCGTGATTTGGTCCGTGGTCTGGTCCAGTGCCACTTTCTGGAAGAAATTCGGCTGGACTCTTTAGAACTGGATGAAGAAAGCATAGCTTGCTTTGCACAAGGCCTTCAGGCCATGACATCGCTTAAAAAGCTCAGTATCACGTCCAAGATGACCTCAAAGGACGGCAGTGAGCTTCTGTGTCTGCTGGCTAGTCTGCACACGTTAATTGAGCTAGAAGAGATAGAGTTGATTGGGTTGAGGATGGGTGATGGAGGGATTGAGGAGCTTGTGAAACACATCCCTAAATGGACCAGACTGAGAAAAATAAATCTGTCAGAGAACCGTGTGAGTGACCGTGCTGGAGAGATGTTGGTGAAAGCACTGTCCCACTGCAGAGCACTGcaacaaatacaGCTTTCCAGGAACAACCTTGGTCACAGTTTCGCAGCTATGCTGGGTCAGGTTCTTCCATCCCTCTCAGAGCTCTCTGAATTGGATCTATCTGAGAACCAGCTAGGTTCAGAAGGGTGTTCAAGTCTCTGTGAGGGTCTGGTCAGCATGAAAGCACTGAAAAAGCTGCACTTAACCTCCATTGGAACCTCAGACTTGGTCACTGTTGCATCTTGCCTCAAACACTGCACCTCTATAGAAGACATCAGCTTGTCATGGAATAAATGCGAAAATGATGTGGTTCTGAAACTGGCTGAAGTTCTGCCACAATGCAGTAAACTGAAAAGGCTTGAtctGGAGGCCAATAATATCAACACTTCAGGAGCCAAGGCCCTTGCTACATGTTTGCACTTTTGTCCTTGGATTGAAGTAATCAGGCTTTGGAGGAATCCCATTAAAAAGGATGACCCGATTTTTAAGGACAAGAGGCTGAATTTCTCATCAACCTAACATGAAGCACACTTCATTAGGATAATATGtctttattagatttttattagatgtttatatttatatttattgctttCTGTATTAATTAGAATATGGAGGTCTTTTGTTTACATTCATTTGGAGAACACATTACCTCACTATACCAATAACTACACCACAACACAGTTTATCTTCTTGTCTGGGATTCCGAGGTCTATGGAAGCGATGTAAACAATACATATTTGCACCTTAACAGAGTGTGAACAACCCATTACAGAGCCATGCCTGCATGTTCAGAGACAATAATGACCAGTCATGTACTGTTCCAAGTGTCATTTTTTTAGAACACATAGTATGCTAACCACAATAGGCTTCTAGCTGTCACACAGAAACCGCAGATTGTGCTTAGACAGCATTTACTGTATGACGCCTGTTAACTTCTTAAACTTCCAGTCTTTCATACTCattgtcatatttttaatatcccATATAACTGTGAACATGCAGATTGGCTGTGAGATAATCAGATTTCCTGCACTAATAAAGGCAGCTTATAAATGATCACCCAAATCAGAAGCCTAACTCTTCATAGTGTCCTTCCATGAACCCATCCTAGATTTCTCCTTGTTGTGTTCTCCTGCAGATCtcgtatttatttctgtatatacttattaaaatattttaggaaTTGCactgtaaaattaaacattactgGACAGTGATTGTATAATTGAATGGTACATGATACCACTAAGGACTGCATTTTAGTGAGTAAATTTTTAGTAACTCTGAGGGCTGATCTCTGCACATTGATTCTGTACCTAGATAGGTCAAAGAACTACATAAATAATCGATCAACTAGCTTTATGAAATGACCAGTAAGTAACCATAGCCCAGCTGAGTGAAGACAATTAAGTAAAGTAAAACTTTGAAGTGCCAAAATAGAAACCCGAAATGTGATGCTGTATTCTGTATAGCTACTCTAGAGGGAAATCATTATGTTAATGATCACATTTGGAGCATACTATGATATACATTTCCCCACAGAAattgatgtgtttatatttgatGAAGGTTGATGTGTCTATATGTATATACGCTTGTCAATAAAGCACTGAAAGAATGAGAA
>XM_026927463.2
ACCATTTCCCCAGAATCAAGGATAGCACAGGATAGCAGTTTACGATAATAACTTAGCTTCATTTAGCTACATTAGGTTATATGTGTTGGGCACCATTCTAAAATACATACTTGCTTAACTTACAGTggacattttaaattcatagtCATCGAGGAGAGAATTATTTTTCCTGAATCCTCCAAACCGCAAGCGTTGttaactttcactttcacttcacCATCACGCCAGTGCGATGCCATAGATCAGGTTAACAGGATACCAGGTTATCTGAGCAGATGGATGAAGATGGAGGAGCTGGACCTGGAGGAGGACGTTCGGGTTGTGGTGGCCCAGGAGGCCACCGCAATAGTGGACATTTTGTGTAAGCAGAGAAATAATGTTCTACAGCAGATCTATGCCTTGGTGGAATCACGGACTCGAGAGCAGCTACAGCACTCGCCCAACCTCAGGGAATCTATCTCAGGTGTTGTGGATTACTTCAAAACTTCAAACCAACAGATATGCCGCCATTTCCTGTACACTATTTGGGCATTCTGTGAGGACATTCCCTTAGAACTGGAGATACGGATTTTAAGCGTAGCAGGATCTTCAACTGGAGCGTTGGTGAACAACACTCATCTGCCAGATATTGAAAATTCCCCTCAATCACCTAATGCAAAACGTGCATGTCTAGACCAGGTGCAGAATTACACAAATGCTGTTAAGAGTTTTCTGCAAAAGAAATTTGAGAAGGTGACaaaagatgtgaagaaaaaggTTTGCCTAGACAAGACATGGCTGTGTTGGAGGACACAGAAATATGCAAGGGTGAGAGACAGACCAGCAAAAACTCAGGAAGGGGAAGAGGTTTCATCAGAGCATAAAGAGTCAGTTGAGGCTCTGTTGAAGAAAACAGGCAGAGTGGTAATGCTATCAGGTCAGGCTGGTTCCGGTAAAACCCTGCTGATGCATTGCCTAAGCCACCACTGGGCTCAGGGCTCTTACCCCTCTATCAAGCTACTGTTCCTGCTGGAGTTCCGCCAGCTCAACCTTGTTTCACAGCCATTGTCTCTGAAAGAGCTGTTGTTTcgtttctttcttcctcctgAGGAAGACAATGAGCAAAGTGAAGCAGTGCTCAGTTACGTTCTTACCAACCCTGAGAAAATTTGCTTTATATTTGATGGATATGATGAGTTTGGGGCAAGATTTACAGACCCAAAAGAGCTTGTTGACTCTGTAAACCCTACCCAGCAGCTGCCATTGGCTGATCTCCTCTCTGCACTATGTAGCTCCAAGATCCTGCCCGGGTGCACAGTGCTGGTCACTTGTAGGCCACGGGATGTTTTTGACCTATTTGGAAGTTCTGGTTATTTTGTAGCAGAGCTGCTTGGGTTCAATCAACAACGTGTGAAGGAATACACTGAGGACTACTTCCATGAAAAGGGAAGTGAAATTAAAGAAAGAGCAGTTAACTTGCTGATGGACAACCATCATCTGCTCTCCATGTCCCATGTTCCAGGATTATGTCATGTTTGCTGTGTCTGCTTAGATCATTTCCTCTCCAGTGATATGTCTCGGCAACCTGGCACTCAACTACCTACTTCCTTGACCCAAATCTACCTCCACAtcctttctgcttttattaGTCGTTGCCAGGGTTGTGGATCTTCTGATAACCATACACCATTACTTCAGAGGTATAGGGATCAAATTGCTATATTGAGTAAGCTTGCAATGGACGGCCTGGAGAACAGCCGTATAGTATTCTCGGCAAATGAACTGTCTCCAGAGCTAATGAACTTTGGTGCCAATGCTGGAATTCTGTCCCGTGTGGATCTTACTTGTGCAGATGGATCGCGAAGTCTGGGCTGTGCCTTTACGCACCTAACCATGCAAGAGTTCATGGCTGCTTTGCATCTTATGACGAACCCCGATATCACAGAGGCACAGCTCAAGAAGAAGCTTAACTTGAAAAGCCGATGGACTGCTAAGACTGATCCAAAAACTGTGTTCACAGACTCCCTtcacctgtatgtgtgtgggctTGCTGCAGAAGCCTGCACTTTAAATCTCGTCCTGCTGGAAGGCAGTGAGAATGCCAGAACTATTGTGCTACAGCGACAAGATGCCATACTTAAGATTTTGCAGCGCTTTGTGGTTAGTGGTCGTCAAACAGGTCCCAAGATTATTGAGCTCTGCCGTTGTGCCcatgaaacacaaaacattgaTTTGGCCAGAGCTGTTGGGTCAAGAGATCGGTTTGAGCTGCGGAATATAAGACTCAACCCTGTGGACATTGATGCCTTGGCATTTGTAACTTCATCTGCAAATCAGATGGTATGTCTGGACTTTGGTGCCTGTTCCATTGAACCAGAGTGTTTAAACATCATTCCCAACTGCAAGAACCTGGAAACTCTCATttttcgTAGCCGTAAATATGATGACAAGTTTGCAGAGGCTTTGTCTGGTATTCTGCCCAAACTCCAGAGCCTGAAGCAGTTAGACTTTATCGGTGGTGGTCTCACTAATATCGGAGCTGCTAAACTTTTCAAGGCTTTGGAGTGCTGCCCGCAAATCACAAATCTCAAtgtcagtgataaCTACCTATCAGATGAGAGTGTAAGAAAGATCACAGAGATGATTCCCAAACTGGCTAAACTCACGTCTATCATGCTGGGGAAGAACAACATTTCCAGAAAAGGAATATTTATACTCATTGAAAAAATGGCAGCTTTTCTGAACATTAAGAAAGTCTATGCAAAtgcaaaaaaaaaggaaatcaatGTTCTGTTCTCCCCGAACACCCCAAATGCAAGCACAGATGACCTAAAGAACGCTGAAGAATCAAAAGAGCTAATctTGAACGACTGGAATCTCAAATGGAGGAATGTGATCAACCTGTGCAATATGCTCAAAGGCTCCTCTCTCACTGTCCTAAAtttgtCGCAGAACTCACTGGGTAACCAAGGTCTAAAGAAGCTACTCGAAAATCTGCCTACTCTTGACACCATTCAGGAAATCAATGTCAGTGACAATGAAGTGGATATGGATGGGGTTGTGCTTCTCTCAACTTATCTCTGTACTCTCAAAGACCTGACTGAGATAGAAGCTAGCCACAATGGAAACAAGAAACTGGTCTTGACATTTAGCTGTAGCAGAAGTGATGCAATAAACCAGTTAACCCCAGATGGGCATGATATTCTGCACAAGAAACTCAGCTTAACGCAATGTGATATAAGCCCTACTGACATGAACAAGCTGTGTAAGAATCTGATAAAGTGCCCAGATCAGCTAGACCTGGATTTCTCCTGTGGAACATTAACGGATGAGTCTATCGAGAAGCTACTAAGGTTCCTTCCGGACATGTCATCTCTCAGTCTACTAAATTTAAGTCACATCAAGATGTCAACAGACAGTGCTTTGTTATTGGTCCAACTGCTTTCTGACTGCCAGCGCACTTCCTCTGTGGAACTCAGACCACTGGGAGAAGCATTCGTCAAGTTCCTCCAAGTCAAATCAGAAGCCGCAACATGCAAGTTTAACCAATATAATCTGAGCAGTGCCAGTCTGGCAAAGCTGTGTGGTATACTGGAGAATTGTCATCATCTGTCTGATCTGGATCTGTCTAGTAACTTCCTTAAAGACGAGGATGTGAAGACCTTTGTTCAATTAATGCCCAAACTTCAGATCTCCAGCTCAGTGAGCCTCAACGATAACAGTCTAACCGAAGTAGGGGCGCTCTACCTGCTGAACCTAATGAACACATGTGAAAGGGTGGCTGCTGTGGAAGTGAGTCTCGGAAAGGAGGAGCAGCAAGCTCTGATTCGCTTTGTTCAGAAGAATTTTACAGACAAAACTTTCAGTCTGAGGCATTGCTGTTTTGAGTCAAGCCATTTGCAAAGTCTTGTGAAAATACTCACCAGTTGTCCCAAGCTTAAACTAGAGTTATCATCATGCACTGTGCAAAGTCAATATCTGTACTTTCTACTGAACAGTTTGGCTACGCTGAAATCAGTCCAAACTTTAGAGCTAAGAAACAATTCTTTCAATGCTGAGGCGATTAAGCATTTGGTTACTGAGTTGTGTAGGGATTCTAATCCCAGAACAATTCGGATAATGGAGCCATGGATTAAAGGGGAAGTTGCAGTTGGCCTTGTGGCATGCTGCCTGCAATTGAATCCATACATAAAGGAGATCAGAGTTGAAAAAACATGGCTGAACCTTTCTATTGAAAGCCTCACTTCTGCCACAGTCCCTAATGTGAATGGGAATCCTTTCGTGTCTGCTGTGCACTCTATAAGCTTTGATGACTGTGAAGTTGAGGGGCAACACTTATCCTCACTGCAATCTACTGTCCAAAAGTGTCCCTCTCTGCGGGAGTTACATTTCTCACAGCTGACGATGGGTGCAGATGGTGCAGCGTTTCTCTCTTCAGTTCTTCCCTTGCTGGAGAATCTCAAGATCCTCAGTCTTAACTCCAAAGGAGAAACAGAAGACGAAGCAGTAATATTTGCATTACGGCATACACAAAAGCACCTGGAACGGCTGAGCTTGTCGCATCATGTAATCAAAGACAGTGGAGCTGCAGTACTAGGGAATGCCCTTCAGGGTTTGACAAGAATGCGTTCACTCAGCCTCTCACAGTGCTTGGATTGCACAGCAACAGGAGGGCGTGATTTGGTCCGTGGTCTGGTCCAGTGCCACTTTCTGGAAGAAATTCGGCTGGACTCTTTAGAACTGGATGAAGAAAGCATAGCTTGCTTTGCACAAGGCCTTCAGGCCATGACATCGCTTAAAAAGCTCAGTATCACGTCCAAGATGACCTCAAAGGACGGCAGTGAGCTTCTGTGTCTGCTGGCTAGTCTGCACACGTTAATTGAGCTAGAAGAGATAGAGTTGATTGGGTTGAGGATGGGTGATGGAGGGATTGAGGAGCTTGTGAAACACATCCCTAAATGGACCAGACTGAGAAAAATAAATCTGTCAGAGAACCGTGTGAGTGACCGTGCTGGAGAGATGTTGGTGAAAGCACTGTCCCACTGCAGAGCACTGcaacaaatacaGCTTTCCAGGAACAACCTTGGTCACAGTTTCGCAGCTATGCTGGGTCAGGTTCTTCCATCCCTCTCAGAGCTCTCTGAATTGGATCTATCTGAGAACCAGCTAGGTTCAGAAGGGTGTTCAAGTCTCTGTGAGGGTCTGGTCAGCATGAAAGCACTGAAAAAGCTGCACTTAACCTCCATTGGAACCTCAGACTTGGTCACTGTTGCATCTTGCCTCAAACACTGCACCTCTATAGAAGACATCAGCTTGTCATGGAATAAATGCGAAAATGATGTGGTTCTGAAACTGGCTGAAGTTCTGCCACAATGCAGTAAACTGAAAAGGCTTGAtctGGAGGCCAATAATATCAACACTTCAGGAGCCAAGGCCCTTGCTACATGTTTGCACTTTTGTCCTTGGATTGAAGTAATCAGGCTTTGGAGGAATCCCATTAAAAAGGATGACCCGATTTTTAAGGACAAGAGGCTGAATTTCTCATCAACCTAACATGAAGCACACTTCATTAGGATAATATGtctttattagatttttattagatgtttatatttatatttattgctttCTGTATTAATTAGAATATGGAGGTCTTTTGTTTACATTCATTTGGAGAACACATTACCTCACTATACCAATAACTACACCACAACACAGTTTATCTTCTTGTCTGGGATTCCGAGGTCTATGGAAGCGATGTAAACAATACATATTTGCACCTTAACAGAGTGTGAACAACCCATTACAGAGCCATGCCTGCATGTTCAGAGACAATAATGACCAGTCATGTACTGTTCCAAGTGTCATTTTTTTAGAACACATAGTATGCTAACCACAATAGGCTTCTAGCTGTCACACAGAAACCGCAGATTGTGCTTAGACAGCATTTACTGTATGACGCCTGTTAACTTCTTAAACTTCCAGTCTTTCATACTCattgtcatatttttaatatcccATATAACTGTGAACATGCAGATTGGCTGTGAGATAATCAGATTTCCTGCACTAATAAAGGCAGCTTATAAATGATCACCCAAATCAGAAGCCTAACTCTTCATAGTGTCCTTCCATGAACCCATCCTAGATTTCTCCTTGTTGTGTTCTCCTGCAGATCtcgtatttatttctgtatatacttattaaaatattttaggaaTTGCactgtaaaattaaacattactgGACAGTGATTGTATAATTGAATGGTACATGATACCACTAAGGACTGCATTTTAGTGAGTAAATTTTTAGTAACTCTGAGGGCTGATCTCTGCACATTGATTCTGTACCTAGATAGGTCAAAGAACTACATAAATAATCGATCAACTAGCTTTATGAAATGACCAGTAAGTAACCATAGCCCAGCTGAGTGAAGACAATTAAGTAAAGTAAAACTTTGAAGTGCCAAAATAGAAACCCGAAATGTGATGCTGTATTCTGTATAGCTACTCTAGAGGGAAATCATTATGTTAATGATCACATTTGGAGCATACTATGATATACATTTCCCCACAGAAattgatgtgtttatatttgatGAAGGTTGATGTGTCTATATGTATATACGCTTGTCAATAAAGCACTGAAAGAATGAGAA
>XR_004578350.1
CACCATTTCCCCAGAATCAAGGATAGCACAGGATAGCAGTTTACGATAATAACTTAGCTTCATTTAGCTACATTAGGTTATATGTGTTGGGCACCATTCTAAAATACATACTTGCTTAACTTACAGTggacattttaaattcatagtCATCGAGGAGAGAATTATTTTTCCTGAATCCTCCAAACCGCAAGCGTTGttaactttcactttcacttcacCATCACGCCAGTGCGATGCCATAGATCAGGTTAACAGGATACCAGGTTATCTGAGCAGATGGATGAAGATGGAGGAGCTGGACCTGGAGGAGGACGTTCGGGTTGTGGTGGCCCAGGAGGCCACCGCAATAGTGGACATTTTGTGTAAGCAGAGAAATAATGTTCTACAGCAGATCTATGCCTTGGTGGAATCACGGACTCGAGAGCAGCTACAGCACTCGCCCAACCTCAGGGAATCTATCTCAGGTGTTGTGGATTACTTCAAAACTTCAAACCAACAGATATGCCGCCATTTCCTGTACACTATTTGGGCATTCTGTGAGGACATTCCCTTAGAACTGGAGATACGGATTTTAAGCGTAGCAGGATCTTCAACTGGAGCGTTGGTGAACAACACTCATCTGCCAGATATTGAAAATTCCCCTCAATCACCTAATGCAAAACGTGCATGTCTAGACCAGGTGCAGAATTACACAAATGCTGTTAAGAGTTTTCTGCAAAAGAAATTTGAGAAGGTGACaaaagatgtgaagaaaaaggTTTGCCTAGACAAGACATGGCTGTGTTGGAGGACACAGAAATATGCAAGGGTGAGAGACAGACCAGCAAAAACTCAGGAAGGGGAAGAGGTTTCATCAGAGCATAAAGAGTCAGTTGAGGCTCTGTTGAAGAAAACAGGCAGAGTGGTAATGCTATCAGGTCAGGCTGGTTCCGGTAAAACCCTGCTGATGCATTGCCTAAGCCACCACTGGGCTCAGGGCTCTTACCCCTCTATCAAGCTACTGTTCCTGCTGGAGTTCCGCCAGCTCAACCTTGTTTCACAGCCATTGTCTCTGAAAGAGCTGTTGTTTcgtttctttcttcctcctgAGGAAGACAATGAGCAAAGTGAAGCAGTGCTCAGTTACGTTCTTACCAACCCTGAGAAAATTTGCTTTATATTTGATGGATATGATGAGTTTGGGGCAAGATTTACAGACCCAAAAGAGCTTGTTGACTCTGTAAACCCTACCCAGCAGCTGCCATTGGCTGATCTCCTCTCTGCACTATGTAGCTCCAAGATCCTGCCCGGGTGCACAGTGCTGGTCACTTGTAGGCCACGGGATGTTTTTGACCTATTTGGAAGTTCTGGTTATTTTGTAGCAGAGCTGCTTGGGTTCAATCAACAACGTGTGAAGGAATACACTGAGGACTACTTCCATGAAAAGGGAAGTGAAATTAAAGAAAGAGCAGTTAACTTGCTGATGGACAACCATCATCTGCTCTCCATGTCCCATGTTCCAGGATTATGTCATGTTTGCTGTGTCTGCTTAGATCATTTCCTCTCCAGTGATATGTCTCGGCAACCTGGCACTCAACTACCTACTTCCTTGACCCAAATCTACCTCCACAtcctttctgcttttattaGTCGTTGCCAGGGTTGTGGATCTTCTGATAACCATACACCATTACTTCAGAGGTATAGGGATCAAATTGCTATATTGAGTAAGCTTGCAATGGACGGCCTGGAGAACAGCCGTATAGTATTCTCGGCAAATGAACTGTCTCCAGAGCTAATGAACTTTGGTGCCAATGCTGGAATTCTGTCCCGTGTGGATCTTACTTGTGCAGATGGATCGCGAAGTCTGGGCTGTGCCTTTACGCACCTAACCATGCAAGAGTTCATGGCTGCTTTGCATCTTATGACGAACCCCGATATCACAGAGGCACAGCTCAAGAAGAAGCTTAACTTGAAAAGCCGATGGACTGCTAAGACTGATCCAAAAACTGTGTTCACAGACTCCCTtcacctgtatgtgtgtgggctTGCTGCAGAAGCCTGCACTTTAAATCTCGTCCTGCTGGAAGGCAGTGAGAATGCCAGAACTATTGTGCTACAGCGACAAGATGCCATACTTAAGATTTTGCAGCGCTTTGTGGTTAGTGGTCGTCAAACAGGTCCCAAGATTATTGAGCTCTGCCGTTGTGCCcatgaaacacaaaacattgaTTTGGCCAGAGCTGTTGGGTCAAGAGATCGGTTTGAGCTGCGGAATATAAGACTCAACCCTGTGGACATTGATGCCTTGGCATTTGTAACTTCATCTGCAAATCAGATGGTATGTCTGGACTTTGGTGCCTGTTCCATTGAACCAGAGTGTTTAAACATCATTCCCAACTGCAAGAACCTGGAAACTCTCATttttcgTAGCCGTAAATATGATGACAAGTTTGCAGAGGCTTTGTCTGGTATTCTGCCCAAACTCCAGAGCCTGAAGCAGTTAGACTTTATCGGTGGTGGTCTCACTAATATCGGAGCTGCTAAACTTTTCAAGGCTTTGGAGTGCTGCCCGCAAATCACAAATCTCAAtgtcagtgataaCTACCTATCAGATGAGAGTGTAAGAAAGATCACAGAGATGATTCCCAAACTGGCTAAACTCACGTCTATCATGCTGGGGAAGAACAACATTTCCAGAAAAGGAATATTTATACTCATTGAAAAAATGGCAGCTTTTCTGAACATTAAGAAAGTCTATGCAAAtgcaaaaaaaaaggaaatcaatGTTCTGTTCTCCCCGAACACCCCAAACAGTGCAAGCACAGATGACCTAAAGAACGCTGAAGAATCAAAAGAGCTAATctTGAACGACTGGAATCTCAAATGGAGGAATGTGATCAACCTGTGCAATATGCTCAAAGGCTCCTCTCTCACTGTCCTAAAtttgtCGCAGAACTCACTGGGTAACCAAGGTCTAAAGAAGCTACTCGAAAATCTGCCTACTCTTGACACCATTCAGGAAATCAATGTCAGTGACAATGAAGTGGATATGGATGGGGTTGTGCTTCTCTCAACTTATCTCTGTACTCTCAAAGACCTGACTGAGATAGAAGCTAGCCACAATGGAAACAAGAAACTGGTCTTGACATTTAGCTGTAGCAGAAGTGATGCAATAAACCAGTTAACCCCAGATGGGCATGATATTCTGCACAAGAAACTCAGCTTAACGCAATGTGATATAAGCCCTACTGACATGAACAAGCTGTGTAAGAATCTGATAAAGTGCCCAGATCAGCTAGACCTGGATTTCTCCTGTGGAACATTAACGGATGAGTCTATCGAGAAGCTACTAAGGTTCCTTCCGGACATGTCATCTCTCAGTCTACTAAATTTAAGTCACATCAAGATGTCAACAGACAGTGCTTTGTTATTGGTCCAACTGCTTTCTGACTGCCAGCGCACTTCCTCTGTGGAACTCAGACCACTGGGAGAAGCATTCGTCAAGTTCCTCCAAGTCAAATCAGAAGCCGCAACATGCAAGTTTAACCAATATAATCTGAGCAGTGCCAGTCTGGCAAAGCTGTGTGGTATACTGGAGAATTGTCATCATCTGTCTGATCTGGATCTGTCTAGTAACTTCCTTAAAGACGAGGATGTGAAGACCTTTGTTCAATTAATGCCCAAACTTCAGATCTCCAGCTCAGTGAGCCTCAACGATAACAGTCTAACCGAAGTAGGGGCGCTCTACCTGCTGAACCTAATGAACACATGTGAAAGGGTGGCTGCTGTGGAAGTGAGTCTCGGAAAGGAGGAGCAGCAAGCTCTGATTCGCTTTGTTCAGAAGAATTTTACAGACAAAACTTTCAGTCTGAGGCATTGCTGTTTTGAGTCAAGCCATTTGCAAAGTCTTGTGAAAATACTCACCAGTTGTCCCAAGCTTAAACTAGAGTTATCATCATGCACTGTGCAAAGTCAATATCTGTACTTTCTACTGAACAGTTTGGCTACGCTGAAATCAGTCCAAACTTTAGAGCTAAGAAACAATTCTTTCAATGCTGAGGCGATTAAGCATTTGGTTACTGAGTTGTGTAGGGATTCTAATCCCAGAACAATTCGGATAATGGAGCCATGGATTAAAGGGGAAGTTGCAGTTGGCCTTGTGGCATGCTGCCTGCAATTGAATCCATACATAAAGGAGATCAGAGTTGAAAAAACATGGCTGAACCTTTCTATTGAAAGCCTCACTTCTGCCACAGTCCCTAATGTGAATGGGAATCCTTTCGTGTCTGCTGTGCACTCTATAAGCTTTGATGACTGTGAAGTTGAGGGGCAACACTTATCCTCACTGCAATCTACTGTCCAAAAGTGTCCCTCTCTGCGGGAGTTACATTTCTCACAGCTGACGATGGGTGCAGATGGTGCAGCGTTTCTCTCTTCAGTTCTTCCCTTGCTGGAGAATCTCAAGATCCTCAGTCTTAACTCCAAAGGAGAAACAGAAGACGAAGCAGTAATATTTGCATTACGGCATACACAAAAGCACCTGGAACGGCTGAGCTTGTCGCATCATGTAATCAAAGACAGTGGAGCTGCAGTACTAGGGAATGCCCTTCAGGGTTTGACAAGAATGCGTTCACTCAGCTCTCACAGTGCTTGGATTGCACAGCAACAGGAGGGCGTGATTTGGTCCGTGGTCTGGTCCAGTGCCACTTTCTGGAAGAAATTCGGCTGGACTCTTTAGAACTGGATGAAGAAAGCATAGCTTGCTTTGCACAAGGCCTTCAGGCCATGACATCGCTTAAAAAGCTCAGTATCACGTCCAAGATGACCTCAAAGGACGGCAGTGAGCTTCTGTGTCTGCTGGCTAGTCTGCACACGTTAATTGAGCTAGAAGAGATAGAGTTGATTGGGTTGAGGATGGGTGATGGAGGGATTGAGG

Function

symbol description
nlrc5 Predicted to be involved in intracellular signal transduction; negative regulation of type I interferon-mediated signaling pathway; and positive regulation of macromolecule biosynthetic process. Predicted to be active in nucleus. Orthologous to human NLRC5 (NLR family CARD domain containing 5).

NR:

description
protein NLRC5 isoform X2

GO:

id name namespace
GO:0045087 innate immune response biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function

KEGG:

id description
K22615 NLRC5, NOD4; NLR family CARD domain containing 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927462.2 True 6643 mRNA 0.43 44 12837300 12858534
XM_026927463.2 False 6640 mRNA 0.43 44 12837300 12858534
XR_004578350.1 False 4918 misc_RNA 0.45 37 12837299 12855553

Neighbor

gene id symbol gene type direction distance location
cetp cetp coding upstream 1366 12825643 ~ 12835933 (+)
herpud1 herpud1 coding upstream 12083 12817711 ~ 12825216 (+)
slc12a3 slc12a3,LOC107583876 coding upstream 20976 12805065 ~ 12816323 (+)
nup93 nup93,LOC107549634 coding upstream 34490 12777610 ~ 12802809 (+)
c6h16orf70 c4h16orf70,si:dkey-102f14.5,LOC107686270,LOC107583793,LOC107738752,LOC107740317,LOC107672279,LOC105892482 coding upstream 96090 12728393 ~ 12741209 (+)
cpne2 cpne2,LOC107583787,LOC107740309 coding downstream 5628 12864162 ~ 12903828 (+)
rspry1 rspry1,LOC107583786 coding downstream 60121 12918655 ~ 12932588 (+)
si:ch211-216l23.2 LOC108264381 coding downstream 74165 12932699 ~ 12948580 (+)
cbln1 cbln1,LOC107549644,LOC107583779,LOC107090910 coding downstream 316616 13175150 ~ 13181119 (+)
n4bp1 n4bp1 coding downstream 466103 13324637 ~ 13340527 (+)
G98505 NA non-coding upstream 63178 12764093 ~ 12774121 (+)
G98425 NA non-coding upstream 295227 12541589 ~ 12542072 (+)
G98335 tbc1d15 non-coding upstream 370271 12466038 ~ 12467028 (+)
G98313 NA non-coding upstream 446669 12388887 ~ 12390630 (+)
G98301 NA non-coding upstream 466168 12368118 ~ 12371131 (+)
G98615 fam192a non-coding downstream 47454 12905988 ~ 12908471 (+)
G98620 NA non-coding downstream 56911 12915445 ~ 12915774 (+)
LOC117597541 NA non-coding downstream 203422 13061956 ~ 13067121 (+)
LOC113534727 NA non-coding downstream 396918 13255452 ~ 13263247 (+)
G98827 lonp2 non-coding downstream 454472 13313006 ~ 13378579 (+)
uri1 uri1 other upstream 1647190 11151714 ~ 11190109 (+)
vps9d1 vps9d1 other upstream 1670497 11145154 ~ 11166802 (+)
hsbp1b NA other upstream 2251794 10581994 ~ 10585505 (+)
LOC113534705 NA other upstream 3488864 9342734 ~ 9348435 (+)
G96116 LOC108264083 other upstream 4176195 8658946 ~ 8661104 (+)
G98946 megf11 other downstream 833073 13691607 ~ 13715766 (+)
G98972 NA other downstream 926561 13785095 ~ 13789390 (+)
smad3b smad3,LOC108264458,LOC108424035,LOC107740443,LOC107755098 other downstream 1074005 13932539 ~ 13956351 (+)
skor1b skor1 other downstream 1176694 14035228 ~ 14042452 (+)
G99341 synm other downstream 1662267 14520801 ~ 14524480 (+)

Expression


Co-expression Network