slc38a8a (slc38a8)


Basic Information

Item Value
gene id slc38a8a
gene name slc38a8
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 14969784 ~ 14978150 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927572.2
TCTACCCGTTCACCCTCTTACCTAACCTCCCTCCTGGTGAACTGTGTAAGTGCGAGCGCTTGGAGTTCCGCGGCCTGTCAGGACTCAGGAATGGAGGCGCAGACAGGAGGAGACGCAGGTGTTTTCGACAAGCCGAGAATGAGCACTCCCAGCCCGAGCCCGAGGCTGGGCTTCTGCGGAGCCGTGTTCATCATGCTGAAGTCCGCTCTGGGTGCAGGACTGCTCAGCTTCCCCTGGGCTTTCTCCCGAGCTGGAGGAGTTCACACTGCAGTCACAGTGGAGATGTTTTCTCTCGTATTCCTCGTTAGTGGACTGGTGATCCTTGGCTACTCATCCTCCATCAGTGGCCAGAGCACGTACCAGGCTGTGGTGGGGCACCTCTGTGGGCCTGCTATAGGCAAACTGTGTGAGCTCTGCTTCGTCCTCAATGTCTTCATGATCTGTGTGGCATTTCTGGTTATATTGGCAGACCagcttaaaaaattgagtattTCCATATATGAGCTAATCACAGATTCAGCTGGGAACGCGATGCCTTATCACTGGTACACAGACCAGAGGTTTACGCTTTTCCTTGTGTGTCTCTTTGTCATTCTTCCTCTCTCAATTCCTAAAGAGATTTGGATACAGAAGTACACCAGCGCATTAGGCACAGTAGCAGCCACCTATTTGACTGTAGCCATTGTTGTAAGATATTACACAAGAACAGTCCCTGAGGTCCACCTGTCCCCTTCATACAACACTGGGATGGGCTTCTGGGCTTCCATATTCAACGTCATCCCCACAATCTGCTTTGGCTTTCAGTGTCATGAGTGCTGCGTTGCCGTCTACAGCAGTTTGGGGAATAAGAAGCTCTCCAACTGGGTCATAATCTCTTTATTGTCTATGTTCATCTGCCTTGTTATCTACACTCTAACTGGTATCTATGGGTATCTCACCTTTGGGAGGAATGTTGCTGCTGATGTTCTGATGTCATACAGTGGAGATGATGTCCTTATGATCATTGCAAGGTTACTCTTTGGGGTCTCCATTATCACCATCTACCCCATTGCTCTATTACTTGgaagGTTGGTGATTCAGGATCCATTACTGCGGCACAGAGAGACTGAGTCTTACGAGACCTGCATCAGAGTTGCCTTGACTGCAGTGTGGATCATCATCACTCTCCTCATTGCTCTGTTTGTTCCAGACATCAGCAAAGTCATCAGCATTATTGGTGGCATTAGCGCATTCTTCATCTTTGTCTTCCCAGGGCTTTGTTTAATATTTGCCATGCAATCTCAGCCAATGTCAGCAAGACTCAGgtGGATTTTAATTGCATGGGGAATGATCACAATTTTATTTGGCACATTCATTTTTGGGCAGAGCACTTTCTTTGCCATTATGCAGGTCTTTCATAAGCTATGATTCTTGTCAGCATTTGAAACTCTACCTCTAAACGGAACTCTTCTGTTTTcaattaaacattacaaaagtATTAATGTAcctaattttacaaaatattgcTGGGAAACCCATGAGTATATTAATATATGGTGCTATAACATCTTTTTTATGGTAAGGTTTTATGATATGCAAAATTGTTAGTAAGGTGGTGAAATCCTTTGAAACAATTTAACAAGGCCTTAAAATCTTTGGAAAATAGTTATGTATTAAGCCTTAGTCTTTTGTAGCgctattgtctttttttttttttttaccctttttgAAACTTTAGCTTCCCTATTGTTCCAAAATTCTGTTAGTAATAGTGTGTTGAATTGTGAAATTATGGCAGTGTACACCTTGCTGCTTTCACTGTTCAGCAATATGAGATTTCCATATAAAAtgattctgtaaaataaaattaggcTTTGGagccactg
>XM_026927573.2
TCTACCCGTTCACCCTCTTACCTAACCTCCCTCCTGGTGAACTGTGTAAGTGCGAGCGCTTGGAGTTCCGCGGCCTGTCAGGACTCAGGAATGGAGGCGCAGACAGGAGGAGACGCAGGTGTTTTCGACAAGCCGAGAATGAGCACTCCCAGCCCGAGCCCGAGGCTGGGCTTCTGCGGAGCCGTGTTCATCATGCTGAAGTCCGCTCTGGGTGCAGGACTGCTCAGCTTCCCCTGGGCTTTCTCCCGAGCTGGAGGAGTTCACACTGCAGTCACAGTGGAGATGTTTTCTCTCGTATTCCTCGTTAGTGGACTGGTGATCCTTGGCTACTCATCCTCCATCAGTGGCCAGAGCACGTACCAGGCTGTGGTGGGGCACCTCTGTGGGCCTGCTATAGGCAAACTGTGTGAGCTCTGCTTCGTCCTCAATGTCTTCATGATCTGTGTGGCATTTCTGGTTATATTGGCAGACCagcttaaaaaattgagtattTCCATATATGAGCTAATCACAGATTCAGCTGGGAACGCGATGCCTTATCACTGGTACACAGACCAGAGGTTTACGCTTTTCCTTGTGTGTCTCTTTGTCATTCTTCCTCTCTCAATTCCTAAAGAGATTTGGATACAGAAGTACACCAGCGCATTAGGCACAGTAGCAGCCACCTATTTGACTGTAGCCATTGTTGTAAGATATTACACAAGAACAGTCCCTGAGGTCCACCTGTCCCCTTCATACAACACTGGGATGGGCTTCTGGGCTTCCATATTCAACGTCATCCCCACAATCTGCTTTGGCTTTCAGTGTCATGAGTGCTGCGTTGCCGTCTACAGCAGTTTGGGGAATAAGAAGCTCTCCAACTGGGTCATAATCTCTTTATTGTCTATGTTCATCTGCCTTGTTATCTACACTCTAACTGGTATCTATGGGTATCTCACCTTTGGGAGGAATGTTGCTGCTGATGTTCTGATGTCATACAGTGGAGATGATGTCCTTATGATCATTGCAAGGTTGGTGATTCAGGATCCATTACTGCGGCACAGAGAGACTGAGTCTTACGAGACCTGCATCAGAGTTGCCTTGACTGCAGTGTGGATCATCATCACTCTCCTCATTGCTCTGTTTGTTCCAGACATCAGCAAAGTCATCAGCATTATTGGTGGCATTAGCGCATTCTTCATCTTTGTCTTCCCAGGGCTTTGTTTAATATTTGCCATGCAATCTCAGCCAATGTCAGCAAGACTCAGgtGGATTTTAATTGCATGGGGAATGATCACAATTTTATTTGGCACATTCATTTTTGGGCAGAGCACTTTCTTTGCCATTATGCAGGTCTTTCATAAGCTATGATTCTTGTCAGCATTTGAAACTCTACCTCTAAACGGAACTCTTCTGTTTTcaattaaacattacaaaagtATTAATGTAcctaattttacaaaatattgcTGGGAAACCCATGAGTATATTAATATATGGTGCTATAACATCTTTTTTATGGTAAGGTTTTATGATATGCAAAATTGTTAGTAAGGTGGTGAAATCCTTTGAAACAATTTAACAAGGCCTTAAAATCTTTGGAAAATAGTTATGTATTAAGCCTTAGTCTTTTGTAGCgctattgtctttttttttttttttaccctttttgAAACTTTAGCTTCCCTATTGTTCCAAAATTCTGTTAGTAATAGTGTGTTGAATTGTGAAATTATGGCAGTGTACACCTTGCTGCTTTCACTGTTCAGCAATATGAGATTTCCATATAAAAtgattctgtaaaataaaattaggcTTTGGagccactg
>XM_034305426.1
TCTACCCGTTCACCCTCTTACCTAACCTCCCTCCTGGTGAACTGTGTAAGTGCGAGCGCTTGGAGTTCCGCGGCCTGTCAGGACTCAGGAATGGAGGCGCAGACAGGAGGAGACGCAGGTGTTTTCGACAAGCCGAGAATGAGCACTCCCAGCCCGAGCCCGAGGCTGGGCTTCTGCGGAGCCGTGTTCATCATGCTGAAGTCCGCTCTGGGTGCAGGACTGCTCAGCTTCCCCTGGGCTTTCTCCCGAGCTGGAGGAGTTCACACTGCAGTCACAGTGGAGATGTTTTCTCTCGTATTCCTCGTTAGTGGACTGGTGATCCTTGGCTACTCATCCTCCATCAGTGGCCAGAGCACGTACCAGGCTGTGGTGGGGCACCTCTGTGGGCCTGCTATAGGCAAACTGTGTGAGCTCTGCTTCGTCCTCAATGTCTTCATGATCTGTGTGGCATTTCTGGTTATATTGGCAGACCagcttaaaaaatATTCAGCTGGGAACGCGATGCCTTATCACTGGTACACAGACCAGAGGTTTACGCTTTTCCTTGTGTGTCTCTTTGTCATTCTTCCTCTCTCAATTCCTAAAGAGATTTGGATACAGAAGTACACCAGCGCATTAGGCACAGTAGCAGCCACCTATTTGACTGTAGCCATTGTTGTAAGATATTACACAAGAACAGTCCCTGAGGTCCACCTGTCCCCTTCATACAACACTGGGATGGGCTTCTGGGCTTCCATATTCAACGTCATCCCCACAATCTGCTTTGGCTTTCAGTGTCATGAGTGCTGCGTTGCCGTCTACAGCAGTTTGGGGAATAAGAAGCTCTCCAACTGGGTCATAATCTCTTTATTGTCTATGTTCATCTGCCTTGTTATCTACACTCTAACTGGTATCTATGGGTATCTCACCTTTGGGAGGAATGTTGCTGCTGATGTTCTGATGTCATACAGTGGAGATGATGTCCTTATGATCATTGCAAGGTTACTCTTTGGGGTCTCCATTATCACCATCTACCCCATTGCTCTATTACTTGgaagGTTGGTGATTCAGGATCCATTACTGCGGCACAGAGAGACTGAGTCTTACGAGACCTGCATCAGAGTTGCCTTGACTGCAGTGTGGATCATCATCACTCTCCTCATTGCTCTGTTTGTTCCAGACATCAGCAAAGTCATCAGCATTATTGGTGGCATTAGCGCATTCTTCATCTTTGTCTTCCCAGGGCTTTGTTTAATATTTGCCATGCAATCTCAGCCAATGTCAGCAAGACTCAGgtGGATTTTAATTGCATGGGGAATGATCACAATTTTATTTGGCACATTCATTTTTGGGCAGAGCACTTTCTTTGCCATTATGCAGGTCTTTCATAAGCTATGATTCTTGTCAGCATTTGAAACTCTACCTCTAAACGGAACTCTTCTGTTTTcaattaaacattacaaaagtATTAATGTAcctaattttacaaaatattgcTGGGAAACCCATGAGTATATTAATATATGGTGCTATAACATCTTTTTTATGGTAAGGTTTTATGATATGCAAAATTGTTAGTAAGGTGGTGAAATCCTTTGAAACAATTTAACAAGGCCTTAAAATCTTTGGAAAATAGTTATGTATTAAGCCTTAGTCTTTTGTAGCgctattgtctttttttttttttttaccctttttgAAACTTTAGCTTCCCTATTGTTCCAAAATTCTGTTAGTAATAGTGTGTTGAATTGTGAAATTATGGCAGTGTACACCTTGCTGCTTTCACTGTTCAGCAATATGAGATTTCCATATAAAAtgattctgtaaaataaaattaggcTTTGGagccactg
>XM_034305427.1
TCTACCCGTTCACCCTCTTACCTAACCTCCCTCCTGGTGAACTGTGTAAGTGCGAGCGCTTGGAGTTCCGCGGCCTGTCAGGACTCAGGAATGGAGGCGCAGACAGGAGGAGACGCAGGTGTTTTCGACAAGCCGAGAATGAGCACTCCCAGCCCGAGCCCGAGGCTGGGCTTCTGCGGAGCCGTGTTCATCATGCTGAAGTCCGCTCTGGGTGCAGGACTGCTCAGCTTCCCCTGGGCTTTCTCCCGAGCTGGAGGAGTTCACACTGCAGTCACAGTGGAGATGTTTTCTCTCGTATTCCTCGTTAGTGGACTGGTGATCCTTGGCTACTCATCCTCCATCAGTGGCCAGAGCACGTACCAGGCTGTGGTGGGGCACCTCTGTGGGCCTGCTATAGGCAAACTGTtgagtattTCCATATATGAGCTAATCACAGATTCAGCTGGGAACGCGATGCCTTATCACTGGTACACAGACCAGAGGTTTACGCTTTTCCTTGTGTGTCTCTTTGTCATTCTTCCTCTCTCAATTCCTAAAGAGATTTGGATACAGAAGTACACCAGCGCATTAGGCACAGTAGCAGCCACCTATTTGACTGTAGCCATTGTTGTAAGATATTACACAAGAACAGTCCCTGAGGTCCACCTGTCCCCTTCATACAACACTGGGATGGGCTTCTGGGCTTCCATATTCAACGTCATCCCCACAATCTGCTTTGGCTTTCAGTGTCATGAGTGCTGCGTTGCCGTCTACAGCAGTTTGGGGAATAAGAAGCTCTCCAACTGGGTCATAATCTCTTTATTGTCTATGTTCATCTGCCTTGTTATCTACACTCTAACTGGTATCTATGGGTATCTCACCTTTGGGAGGAATGTTGCTGCTGATGTTCTGATGTCATACAGTGGAGATGATGTCCTTATGATCATTGCAAGGTTACTCTTTGGGGTCTCCATTATCACCATCTACCCCATTGCTCTATTACTTGgaagGTTGGTGATTCAGGATCCATTACTGCGGCACAGAGAGACTGAGTCTTACGAGACCTGCATCAGAGTTGCCTTGACTGCAGTGTGGATCATCATCACTCTCCTCATTGCTCTGTTTGTTCCAGACATCAGCAAAGTCATCAGCATTATTGGTGGCATTAGCGCATTCTTCATCTTTGTCTTCCCAGGGCTTTGTTTAATATTTGCCATGCAATCTCAGCCAATGTCAGCAAGACTCAGgtGGATTTTAATTGCATGGGGAATGATCACAATTTTATTTGGCACATTCATTTTTGGGCAGAGCACTTTCTTTGCCATTATGCAGGTCTTTCATAAGCTATGATTCTTGTCAGCATTTGAAACTCTACCTCTAAACGGAACTCTTCTGTTTTcaattaaacattacaaaagtATTAATGTAcctaattttacaaaatattgcTGGGAAACCCATGAGTATATTAATATATGGTGCTATAACATCTTTTTTATGGTAAGGTTTTATGATATGCAAAATTGTTAGTAAGGTGGTGAAATCCTTTGAAACAATTTAACAAGGCCTTAAAATCTTTGGAAAATAGTTATGTATTAAGCCTTAGTCTTTTGTAGCgctattgtctttttttttttttttaccctttttgAAACTTTAGCTTCCCTATTGTTCCAAAATTCTGTTAGTAATAGTGTGTTGAATTGTGAAATTATGGCAGTGTACACCTTGCTGCTTTCACTGTTCAGCAATATGAGATTTCCATATAAAAtgattctgtaaaataaaattaggcTTTGGagccactg

Function

symbol description
slc38a8 Predicted to enable amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be integral component of membrane.

NR:

description
putative sodium-coupled neutral amino acid transporter 8

GO: NA

KEGG:

id description
K14994 SLC38A7_8; solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927572.2 True 1865 mRNA 0.44 10 14969784 14978150
XM_026927573.2 False 1808 mRNA 0.44 10 14969784 14978150
XM_034305426.1 False 1835 mRNA 0.44 10 14969784 14978150
XM_034305427.1 False 1787 mRNA 0.44 10 14969784 14978150

Neighbor

gene id symbol gene type direction distance location
pnp6 LOC108264829,LOC108424368,LOC103033869 coding downstream 188231 14771280 ~ 14781553 (-)
calb2a calb2,calb2a,LOC108264862,LOC107672188 coding downstream 209290 14748622 ~ 14760494 (-)
got2a got2,LOC107694944,LOC107596935,LOC107738675,LOC107726360 coding downstream 227104 14735413 ~ 14742680 (-)
si:dkey-12e7.4 LOC108264682,LOC108424351,LOC106560815,LOC107578981 coding downstream 234629 14730120 ~ 14735155 (-)
syt19 LOC108263939 coding downstream 240178 14719885 ~ 14729606 (-)
mbtps1 mbtps1,LOC107672278,LOC107694940,LOC107596929 coding upstream 10638 14988788 ~ 15015137 (-)
pskh1 pskh1,LOC107726478,LOC107672191,LOC107596998,LOC107733554 coding upstream 40808 15018958 ~ 15026868 (-)
nrn1la nrn1l coding upstream 65148 15043298 ~ 15072495 (-)
edc4 edc4,LOC107733561,LOC107726309 coding upstream 97724 15075874 ~ 15105110 (-)
nutf2 nutf2 coding upstream 127165 15105315 ~ 15119718 (-)
G99493 NA non-coding downstream 320791 14648078 ~ 14648993 (-)
G99482 NA non-coding downstream 366312 14601223 ~ 14603472 (-)
G99453 NA non-coding downstream 433774 14533820 ~ 14536010 (-)
LOC113534271 NA non-coding downstream 450000 14510924 ~ 14519784 (-)
G99433 NA non-coding downstream 516677 14448856 ~ 14453107 (-)
G99780 NA non-coding upstream 171253 15149403 ~ 15150315 (-)
G99775 NA non-coding upstream 182053 15160203 ~ 15168426 (-)
G99784 NA non-coding upstream 193161 15171311 ~ 15173434 (-)
G99801 NA non-coding upstream 198025 15176175 ~ 15180912 (-)
G99915 ctcf non-coding upstream 319455 15297605 ~ 15299578 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other downstream 622776 14335936 ~ 14347008 (-)
c6h15orf39 c4h15orf39 other downstream 1407210 13550680 ~ 13562574 (-)
G98770 NA other downstream 1917473 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 2545806 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 2564503 12396507 ~ 12405281 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 369016 15347166 ~ 15357563 (-)
G101178 NA other upstream 3209297 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 5001919 19980069 ~ 19980259 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 5417716 20395866 ~ 20416574 (-)
G102566 NA other upstream 5975452 20953602 ~ 20966910 (-)

Expression


Co-expression Network