b4galnt3b


Basic Information

Item Value
gene id b4galnt3b
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 30311233 ~ 30353488 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034304987.1
aggagGGCGTGGCCGAAATCCTACCTGTAGGCTAAGTGGAAGATTTGCGCCGCACCGACAGACAGGAGACGCCgctgccgccgccgccgccgcgcTCGCGCCCCTGTGAGGACTTTATGTAAAGACTCGGGATGTTACGGCTCCCCGGAGGGGTCAGAAACAGTGGGACACGCGCTGACGGGACGCCGGTACGCGTGGACATGCCACTGCCAGACACCGAGTGACCTGAGCGCGCGCAGGAGGGACAATGATGCCATTCTTCCCGTTGAGGAAAATCAAGCGGAACGGAAAGTACCTGTTCATCGGGGCGGTGCTGGTGGTCGCGAGCGTCGCGGCGTATCTGGAGCACGTGGCCACGAGCCTGTGGAATCGCGTCGGTGACAGTCAGCAGAAGGAGCAAGCAGCCTGCGCAAAGCCTGCGaacAGAGACCACGTTTCGAACGAGGACGTCATCTGGTCATCCAAATACGTCCCTCAACCCTGGAAGCCggagtATAAAGGGCAGGCGAATCTTCACGTCTTTGAGGACTGGTGTGGAACCTCCGTCGCAAGCCTCAGAAAGAACCCACACTACCCCCTGTACCCTCACtctCGTATCACAGTGAAGAAACTCGCCGTGTCTCCGAGCTGGAAGAATTACGGCCTCAGGATCTTCGGCTACATCCACCCGTCCACCAGCGgtgAGTTTCTTTTCGCAGTGGCATCTAAAGATAACTGCGAGTTCTGGCTGAGTCAGGATGAGAACCCGGAGAACCTGCAGCTCCTCGCTCATGTTGGGAAGaATGGTGAGGAGTGGACCGCTCCGGGGGAATACGGCAAATACAGCAGCCAAATATCCAAACCAGtcgtacTTCAGCAGCAGAAAAGGTTTTACTTTGAGCTGATCCACAAATACAACGATCATAGCACCAACCACGTGGAAGTCGCAtggagACTCAATAAAGCTGGAACGCAGTTTGAACTTATCGACTCCGACTCGCTGTCTCTTTACACCGtcGAGTCCTCCCTGAAGATGAGTGATGTCAGTCACATTCCTCAGACGGCTGCTAGTCACGTAGCCCTGCCTCTGGACAAAGCACGAGCTGCACACCACGGGGCAGAGATGCTGAGAGAAGACCCTCgtgacactttttttaaaatgcctTTACTGGACGCGTCCCGATTACGGAGTGTGTTACCAGAATGCTCCTATAAACCCAGTTACACGGTTAAAGGCAGGCCGATCAGCCGTTATCAGGGTCTGCAGTTTgtccACTTGACTTACGTTTACCCCAATGACTACACACGGCTCACACACATGGAGAACGGCAACACCTGTTTCTACCAGATGAAACCATACTATTTCAagatTTACGGCTTTTCGTGGTACATGAGACTGGACCAACTGGaggaaaagcacacagacaatgGTGATTACAGGGCGGGATGGAAGGAGTTCAGAGGACAGGACGAGGAGATGGAAGACGAGGATGAATTTGACTACCGTGATGACTACATACAGCGCCAACAAAGGAAACTCTTCTCTAACTCACTGAACAAGAAGAACGTGAGTAGAAGAAGGAGGACAAACCAACACAATATGAACAGAATAGAGACAGTGCAGCAGGAGAACCTGGCACGAGGTAATGGATCAGTATCAGAGAAGGAGAACCAAAATAAGCtgcaaaaccaaaccaaaatgGCTGATCAGAACCAAAATAAACtgcaaaaccaaaccaaaatgGCTGATCAGAACCAAAATAAActgcaaaaccaaaacaaaatggctgatcAGAACCAAAATAAActgcaaaaccaaaacaaaatggctgatcAGAACCAAAATAAActgcaaaaccaaaacaaaatggctgatcAGAACCAAAATAAActgcaaaaccaaaacaaaatggctgatcAGAACCAAAATAAActgcaaaaccaaaacaaaatggcCAACAAGAACCAACGTAAACTgcgaaaacaaaagaaaatggcCATCGAGAACCAATATAAActgcaaaaccaaaacaaaacagtggaaGAGAACCAAAATAAGCTGCGAAACCAAACCAAAATGGCCGACAAGAACCAACATAATgtgcaaaaccaaaacaaaactgcTGACGAGAACCAACATAAACTgcgaaaacaaaacaaaatggactACAAGAACCAACAATTTGGACGGAAGGCTGAAATTCCTGGTCAGAAAGAAGATAAAGAACCTATTGGTCAAGTGAATCATATGAAGCAAGAAGATAAAGCTCCAATCCAGGATCAGAGATCAGGAGCAAAACCGCATGTTATTAACGGACCGAAAAATGGCACAAGGAATATCTTTCTTTCCGCGTCAAAGCATGAGGACCCTCAGCCTCCTGAAGATGATTCCATCCATCAGAAATATCGTCATGGCAACGTCCACCAGGGCAAATACACCAACCCTCCTCCTCCTGTACACACCGGCAACTCTGCATTGGGGAAAGGCGGAGACTTTGTGAATAGGGGCGGAGCCAAAACGCATAAAGAACTCACTAACGACAGCACAGACCTGTGGGTCATATACGGAGACTCGGAGATGGAGGCCGGGGTCGTGAGCAAGGCTGAGTATGACCCTGAGATCAGATGGGATCAGACGTTTCAGGTCGGTCAGACAGACTTTCAGGCGCTGAGGACTGATTGGATAGACCTGAACTGTAACGTGAGTGGAAATCTgctgatcagccaatcagaagtgaCGGCTTTGGTGCAGGTGTTTATGGAGAAACTCGAGCTGAAATATCCCAGtcagttCTCTCTGCAGCGTGTGGTAAATGTAGAGAAGCGAGTGGATGAGGCTCGGGGGAATCGTTATCTCCTGGAGTTGGAGCTGCTGGAGTCCTCAGGAGCTCGAGTTCGTCTCGTTCACTACGTCTACGTGATGACGAGGAGGAACGTCCAGCGGCTGCTGCTGTGTAACCCACGCAGCTTCCTGTGGAACCCCGACGCTACTATACACATCATCATaccagtgaagaaCCAGGCTCGTTGGGTGCAGAAGTTCATCGTGGACATGGAGGAGCTTCACGAGGTCACAGGAGACgacaacatcaacatcatcatcgcCGATTATTCCAGCACTGATATGGACATAGAACAGGCTCTGAAGAACTCTCGCCTCcccaagtTTCAGTATCTAAGACTGACAGGAAACTTTGAGAGATCAGCGGGTCTTCAGGCCGGAATCAACCTGATCACAGATAATCACAgcattgtgtttctgtgtgaccTGCATCTCCACTTCCCGCTGAGTTTCTTCGACTCGGTGAGGAAACACTGTGTTGAAGGACACATGGCGTTTGCTCCCTTAGTGATGAGGCTTAACTGTGGAGCGACGCCTCAGGAGCCCGACGGTTACTGGGAGGTGAACGGTTTTGGTTTGCTGGGTATTTATAAATCTGACCTGGACGCTGTAGGAGGCATGAACACCAGAGAATTCACGAACCGCTGGGGAGGAGAGGACTGGGAACTCCTGGACAGGATCATGGAGGCGGGGTTGGAGGTGGAGCGTCTGCACTTGAGGAATTTCTTCCACTACCACCACTCCAGACGCGGCATGTGGAACCGCAGAACACTAAACGGAGAgtagatctggcaaccctacgTCCTCAAAAACGACACTCACTGTGGCACTTTAACCAGCCTTCGCCCTCAACCTTCGCCCTTTCGGATTGCAGACGTGTCGCTCCTTTGTGGGTGGAGCCATGGGACAATGCTGAGGTTTGATTGGTTGATCATCACTCACATGGTGTAGGTGCTGATGAAGTTCTCAGGAGGAACAAACCGTTACTACTAATGATACACTAATGATAAAGTAGTGATGTCACACACTCGGGCTTTTTAAAACAGAGACTTCAATCTTCAATTATTTTAATCAGtgtattaaattttttatgaaCTGTGAcccgtattcagagttgagatAAGCGCACGTAGCGAGAAGTTAATACCGAGATCAGGCACAtcggtattcagacctcagaagtTACATGAGagtgggggcggagtttgtctgAAAGAGAGGCGTGTCTTAGTTACGCTCGACTCTGGTCTCGAGCTTAAGCGCATGTTTCTTGCGTGATCtcagctcgagtgaggagcagcgttAAGTCCAGCGGTTTGACGGAGgtttcatgctgaaatttatattttggctctaaacacactcaaacacactcaaacacactatTCCAGGATGatattaaatacttaaatatatatatgacactactaattaattaacagtATCATCAGAGGAGACGCTTTTTAATCAGAGACACGGCTTATCAGGAGCAGTGAATATTTTCTGCATGaagtgatgaatgaagttaaagtttctctgtaagcgtagcaggcgagtgcttggtcagcttatccttcacactctgaacacaaacatttattaaattgaCAAATCACTTCTTctcaagaaaaatctgccaGCCTCGGAGGTGTGAACTACTCGCAGGTGATTGTAATAATCCGAATGTGATGTGAAGCTCGTGAAATCCACTTCAGTAGCTGCGAAACCCGACTCTGAACACGCGTAACTTTCCCACGTAAATATTTGCACGACTTTCgccgactctgaatacggccctgTGTGTACTCCTCACTGGTCACATTTCTTAAAGTTGAGTGCAACTCATTAGCAGGATGATTTGAGAGGTCTTCTGTTGGGTTTGGGGTGTAAACAGTATGTCTTCATTAGGAAAAGGTATTTTCTGTTTCCTGAGTGCAGTGTATAGAGGAGTATAATCTTCCTGCGGTGTGTTTTTCCGCTATTTACACACTCACTGAGACTTGATTAAGATGCTCGATGGGTTCAGGGCTTCTTTTGTGGTTTATTATACGTTAAATTTTATTGAAATGGATTATTGTCCAAGGAAATATTTCCtcaggaaaaaagaaaccatATCTGCACAAAAGtgccttttatttttaattctaaaCAGAATAAAGAAATGCGACAGGAACATTTTGctattaaataaatcacttatcTGAAGTTATTACCCAGGATGCaatgtttttatgcaaatttaaataccatgtttttatatataaggGAAAAGAGGCAGGTGGTTTATGTGCCGTAATTGATGTACATGTATGGAATAATATTTTTGCCTCTggtatttgaatttaaattttgAAATTGTATATAAACTTTTGTATTTTGACTCAGTGAATTGATTTGGTCTGCTGTCATTTGAATttgttcttaaaataaaacatcctttttttaaataaaccaaatctattttaaaattacTAAATATTTTGGTATTATTACAATACATTTCCGATgcaaattcatataaaaaatcatattcaacaatataaacactgtatattatatttatatacttatatatttctatacaatttaatataaattttatttgaatttgaaaactCAACACTGAAGTTGAAATTTTGTccaattttgttatttttttaaattaaa

Function

NR:

description
PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

GO: NA

KEGG:

id description
K09656 B4GALNT3; beta-1,4-N-acetylgalactosaminyltransferase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034304987.1 True 5488 mRNA 0.45 20 30311233 30353488

Neighbor

gene id symbol gene type direction distance location
LOC117597588 NA coding upstream 5439 30304632 ~ 30305794 (+)
cd151l LOC108264681,LOC108410653,LOC105891114,LOC106587086,LOC103368535,LOC106561929 coding upstream 25699 30272544 ~ 30285534 (+)
taldo1 taldo1,LOC107711369,LOC107599753 coding upstream 45672 30258068 ~ 30265561 (+)
ddb1 ddb1 coding upstream 185011 30106693 ~ 30126222 (+)
iqcg NA coding upstream 587166 29716593 ~ 29724067 (+)
c2cd5 c2cd5,LOC107686569 coding downstream 12131 30365619 ~ 30408560 (+)
LOC117597544 NA coding downstream 25215 30378703 ~ 30379745 (+)
lmf2a lmf2,LOC108437435 coding downstream 57178 30410666 ~ 30426455 (+)
si:dkey-88e18.2 NA coding downstream 232295 30585783 ~ 30592140 (+)
vwf vwf coding downstream 274924 30628412 ~ 30666725 (+)
G107223 NA non-coding upstream 246795 29971482 ~ 30064438 (+)
G107222 NA non-coding upstream 340140 29970878 ~ 29971093 (+)
G107216 NA non-coding upstream 388161 29922752 ~ 29923072 (+)
G107140 NA non-coding upstream 621417 29685374 ~ 29689816 (+)
G107075 NA non-coding upstream 828769 29482234 ~ 29482464 (+)
G107387 NA non-coding downstream 8102 30361590 ~ 30429223 (+)
G107382 LOC108264175,LOC108437702 non-coding downstream 99368 30452856 ~ 30455383 (+)
G107591 calu,calub,LOC108438561,LOC107733278,LOC107600067,LOC107662890,LOC105939814,LOC102225510 non-coding downstream 204135 30557623 ~ 30562901 (+)
G107629 bbs10 non-coding downstream 375346 30728834 ~ 30729657 (+)
LOC113526871 NA non-coding downstream 474588 30828076 ~ 30829663 (+)
cmc2 cmc2,LOC107711752 other upstream 1507161 28799464 ~ 28804072 (+)
def8 def8 other upstream 2149364 28146263 ~ 28161869 (+)
uraha LOC108264586,LOC108417536 other upstream 2240548 28066882 ~ 28070685 (+)
LOC113526832 LOC108263905,LOC108435606,LOC105906450 other upstream 2344925 27944790 ~ 27966308 (+)
ddx11 ddx11,LOC107705769,LOC107734845,LOC107686596,LOC107662896 other upstream 2765707 27526123 ~ 27545526 (+)
dnaja2b dnaja2l,LOC103026191,LOC108438176,LOC107735561,LOC107686561,LOC107705812,LOC103369280 other downstream 40772 30394260 ~ 30498315 (+)

Expression


Co-expression Network