fam169b (fam169b)


Basic Information

Item Value
gene id fam169b
gene name fam169b
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 14640960 ~ 14648967 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034305028.1
AAGGTTATTTTGCACCTTCAAAATGGAGTCCAACTGTAACTTGCCTGCTGCAAATCAAGTGAATTCCTACCCAGTGGACCTGCCTTGTCAGGATTATGACGCACTGTgccctgactctgaatacctgTCAAGTCTTGAGTCAGACATGAAGTCATTTCGCCTTCCCAGTGGAACAGAGGTAAACGTAACTCATGACAATATAGGCAAGCTCAGGCTGTTTGGCGAGGATGACCCACCTCATTACCTTCTCGCCCTCCATTTACCGGGAGATGAAACCCAAGTGGTTGCCATATACATGCATCACAAATGGTGGCCCATCAGTGATGTTTTGAAGACATCCAGCAAATCCAGAAATGGACTTGTGTTTGTGGAGTCAGTGATGGAGAGAGTTATACTATTCCTGCTAAGTCAGGTTGTGTTTGGAATGGTGGAAAGGTCTCTGGGAGAACACGTGTATTTCTCAACTCATCCTGTGTCAGAATATGGCAAAATCTTCTGGCAAGATGGAGAAGCAGTTGGCTTTTACACTGTTAAAAAGAAAGgAAGCCTGTGCAATGGATGCACTGGTCAGAGTTACCTTCTCCCCGTGCTGGACACTGTGTTTGTGCGCAGCCACTGGAGGAGGAACGGCCTAGCCACGAGGATGCTCCAGGATTTCTGCAAGTCCATGCCCACAGAGAGGGTGCTGGGCATTAGCTATCCCATATCTCCCAGTATGTATGGAGTATGCAAGAAGTACCTAGAGATTCACCAGGAACAAAGAGAGCACCTCTATGAAGTGGAGGCTCCTGGGAATTGGAGTCAGAGACGCAATGTGTGGTTGAGCATACTACTCCAGCACCAGCCAACACACAGTACGATCTCAGATGAGAGTCCACACATCACACAAGCTACAGACAAACAGCTCACAGACACTAAAGGGAAGAAGAGCATGCCACGACTCGCAGGCACTGAACCACGCAGGCATCAGAGAAGATGTGTCGAGAAGCGACCAACTGACCAGGCTGGGACGCCACAGAAGtgtaaaaaaaccaaaatatcCTAGTAAATTCTGTTCTACTGAATGGGTCTAGATGTGGAAACCCTATGAAGAAGCTGTACTTTGTCACTGTTCTTTATACATCAGTCTCAGGGATTTGTAGTTGCAATACAACATAAAACCAAAACGTCTGTGATTGCAGAAGAATATAGAGACATTCACAAGGTCTTGAAAATGAATGCCGTGTTCACTGTAAGCATGATTAGCACTCATAACTGTGTTAGTGTGACACTGAATTTACTGGTTGAACAGTGtccaaaaatctaaattaaaaataaataaataataaacctttttttatttaaaaacctttGAGGTATTCAGTATTCCCTAATTCTAGTGTTCTAACGAAGACCAGTGCAGTGTGTACTGTTAGCTTCTATTAGCTTTTGAGTAAATCCTCTTTACACTTTATGtgaattttttcccccttgccTAATGTGGCACCAGGAAGGAAAAGACAGTCATCAGTTACTGAAATCGCAAGGTCATTTGTCAAGAAAAACAAAGTTCAAATTCCAATTCAAACAAAGCTACATCTGGATTTAATAGCAGGAATGGGAACTGCAGGTCACTGACAGGTGCATAGCCTTACAAAATACTGAACAACAATCAAATTTAAACTAATCTGTAACCATATTAGTTAGTTGTCAGCTAAAGCTTAATGtagctttttttctgttatagaAGTGTCATTTGGttgatggagaaaaaaataaaacatttgactttta
>XM_034305029.1
AAGGTTATTTTGCACCTTCAAAATGGAGTCCAACTGTAACTTGCCTGCTGCAAATCAAGTGAATTCCTACCCAGTGGACCTGCCTTGTCAGGATTATGACGCACTGTgccctgactctgaatacctgTCAAGTCTTGAGTCAGACATGAAGTCATTTCGCCTTCCCAGTGGAACAGAGGTAAACGTAACTCATGACAATATAGGCAAGCTCAGGCTGTTTGGCGAGGATGACCCACCTCATTACCTTCTCGCCCTCCATTTACCGGGAGATGAAACCCAAGTGGTTGCCATATACATGCATCACAAATGGTGGCCCATCAGTGATGTTTTGAAGACATCCAGCAAATCCAGAAATGGACTTGTGTTTGTGGAGTCAGTGATGGAGAGAGTTATACTATTCCTGCTAAGTCAGGTTGTGTTTGGAATGGTGGAAAGGTCTCTGGGAGAACACGTGTATTTCTCAACTCATCCTGTGTCAGAATATGGCAAAATCTTCTGGCAAGATGGAGAAGCAGTTGGCTTTTACACTGTTAAAAAGAAAGgAAGCCTGTGCAATGGATGCACTGGTCAGAGTTACCTTCTCCCCGTGCTGGACACTGTGTTTGTGCGCAGCCACTGGAGGAGGAACGGCCTAGCCACGAGGATGCTCCAGGATTTCTGCAAGTCCATGCCCACAGAGAGGGTGCTGGGCATTAGCTATCCCATATCTCCCAGTATGTATGGAGTATGCAAGAAGTACCTAGAGATTCACCAGGAACAAAGAGAGCACCTCTATGAAGTGGAGGCTCCTGGGAATTGGAGTCAGAGACGCAATGTGTGGTTGAGCATACTACTCCAGCACCAGCCAACACACAGTACGATCTCAGATGAGAGTCCACACATCACACAAGCTACAGACAAACAGCTCACAGACACTAAAGGGAAGAAGAGCATGCCACGACTCGCAGGCACTGAACCACGCAGGCATCAGAGAAGATGTGTCGAGAAGCGACCAACTGACCAGGCTGGGACGCCACAGAAGtgtaaaaaaaccaaaatatcCTAGTAAATTCTGTTCTACTGTCTCAGGGATTTGTAGTTGCAATACAACATAAAACCAAAACGTCTGTGATTGCAGAAGAATATAGAGACATTCACAAGGTCTTGAAAATGAATGCCGTGTTCACTGTAAGCATGATTAGCACTCATAACTGTGTTAGTGTGACACTGAATTTACTGGTTGAACAGTGtccaaaaatctaaattaaaaataaataaataataaacctttttttatttaaaaacctttGAGGTATTCAGTATTCCCTAATTCTAGTGTTCTAACGAAGACCAGTGCAGTGTGTACTGTTAGCTTCTATTAGCTTTTGAGTAAATCCTCTTTACACTTTATGtgaattttttcccccttgccTAATGTGGCACCAGGAAGGAAAAGACAGTCATCAGTTACTGAAATCGCAAGGTCATTTGTCAAGAAAAACAAAGTTCAAATTCCAATTCAAACAAAGCTACATCTGGATTTAATAGCAGGAATGGGAACTGCAGGTCACTGACAGGTGCATAGCCTTACAAAATACTGAACAACAATCAAATTTAAACTAATCTGTAACCATATTAGTTAGTTGTCAGCTAAAGCTTAATGtagctttttttctgttatagaAGTGTCATTTGGttgatggagaaaaaaataaaacatttgactttta
>XM_034305030.1
AAGGTTATTTTGCACCTTCAAAATGGAGTCCAACTGTAACTTGCCTGCTGCAAATCAAGTGAATTCCTACCCAGTGGACCTGCCTTGTCAGGATTATGACGCACTGTgccctgactctgaatacctgTCAAGTCTTGAGTCAGACATGAAGTCATTTCGCCTTCCCAGTGGAACAGAGGTAAACGTAACTCATGACAATATAGGCAAGCTCAGGCTGTTTGGCGAGGATGACCCACCTCATTACCTTCTCGCCCTCCATTTACCGGGAGATGAAACCCAAGTGGTTGCCATATACATGCATCACAAATGGTGGCCCATCAGTGATGTTTTGAAGACATCCAGCAAATCCAGAAATGGACTTGTGTTTGTGGAGTCAGTGATGGAGAGAGTTATACTATTCCTGCTAAGTCAGGTTGTGTTTGGAATGGTGGAAAGGTCTCTGGGAGAACACGTGTATTTCTCAACTCATCCTGTGTCAGAATATGGCAAAATCTTCTGGCAAGATGGAGAAGCAGTTGGCTTTTACACTGTTAAAAAGAAAGgAAGCCTGTGCAATGGATGCACTGGTCAGAGTTACCTTCTCCCCGTGCTGGACACTGTGTTTGTGCGCAGCCACTGGAGGAGGAACGGCCTAGCCACGAGGATGCTCCAGGATTTCTGCAAGTCCATGCCCACAGAGAGGGTGCTGGGCATTAGCTATCCCATATCTCCCAGTATGTATGGAGTATGCAAGAAGTACCTAGAGATTCACCAGGAACAAAGAGAGCACCTCTATGAAGTGGAGGCTCCTGGGAATTGGAGTCAGAGACGCAATGTGTGGTTGAGCATACTACTCCAGCACCAGCCAACACACAGTACGATCTCAGATGAGAGTCCACACATCACACAAGCTACAGACAAACAGCTCACAGACACTAAAGGGAAGAGCATGCCACGACTCGCAGGCACTGAACCACGCAGGCATCAGAGAAGATGTGTCGAGAAGCGACCAACTGACCAGGCTGGGACGCCACAGAAGtgtaaaaaaaccaaaatatcCTAGTAAATTCTGTTCTACTGAATGGGTCTAGATGTGGAAACCCTATGAAGAAGCTGTACTTTGTCACTGTTCTTTATACATCAGTCTCAGGGATTTGTAGTTGCAATACAACATAAAACCAAAACGTCTGTGATTGCAGAAGAATATAGAGACATTCACAAGGTCTTGAAAATGAATGCCGTGTTCACTGTAAGCATGATTAGCACTCATAACTGTGTTAGTGTGACACTGAATTTACTGGTTGAACAGTGtccaaaaatctaaattaaaaataaataaataataaacctttttttatttaaaaacctttGAGGTATTCAGTATTCCCTAATTCTAGTGTTCTAACGAAGACCAGTGCAGTGTGTACTGTTAGCTTCTATTAGCTTTTGAGTAAATCCTCTTTACACTTTATGtgaattttttcccccttgccTAATGTGGCACCAGGAAGGAAAAGACAGTCATCAGTTACTGAAATCGCAAGGTCATTTGTCAAGAAAAACAAAGTTCAAATTCCAATTCAAACAAAGCTACATCTGGATTTAATAGCAGGAATGGGAACTGCAGGTCACTGACAGGTGCATAGCCTTACAAAATACTGAACAACAATCAAATTTAAACTAATCTGTAACCATATTAGTTAGTTGTCAGCTAAAGCTTAATGtagctttttttctgttatagaAGTGTCATTTGGttgatggagaaaaaaataaaacatttgactttta
>XM_034305031.1
AAGGTTATTTTGCACCTTCAAAATGGAGTCCAACTGTAACTTGCCTGCTGCAAATCAAGTGAATTCCTACCCAGTGGACCTGCCTTGTCAGGATTATGACGCACTGTgccctgactctgaatacctgTCAAGTCTTGAGTCAGACATGAAGTCATTTCGCCTTCCCAGTGGAACAGAGGTGGAGTCAGTGATGGAGAGAGTTATACTATTCCTGCTAAGTCAGGTTGTGTTTGGAATGGTGGAAAGGTCTCTGGGAGAACACGTGTATTTCTCAACTCATCCTGTGTCAGAATATGGCAAAATCTTCTGGCAAGATGGAGAAGCAGTTGGCTTTTACACTGTTAAAAAGAAAGgAAGCCTGTGCAATGGATGCACTGGTCAGAGTTACCTTCTCCCCGTGCTGGACACTGTGTTTGTGCGCAGCCACTGGAGGAGGAACGGCCTAGCCACGAGGATGCTCCAGGATTTCTGCAAGTCCATGCCCACAGAGAGGGTGCTGGGCATTAGCTATCCCATATCTCCCAGTATGTATGGAGTATGCAAGAAGTACCTAGAGATTCACCAGGAACAAAGAGAGCACCTCTATGAAGTGGAGGCTCCTGGGAATTGGAGTCAGAGACGCAATGTGTGGTTGAGCATACTACTCCAGCACCAGCCAACACACAGTACGATCTCAGATGAGAGTCCACACATCACACAAGCTACAGACAAACAGCTCACAGACACTAAAGGGAAGAAGAGCATGCCACGACTCGCAGGCACTGAACCACGCAGGCATCAGAGAAGATGTGTCGAGAAGCGACCAACTGACCAGGCTGGGACGCCACAGAAGtgtaaaaaaaccaaaatatcCTAGTAAATTCTGTTCTACTGAATGGGTCTAGATGTGGAAACCCTATGAAGAAGCTGTACTTTGTCACTGTTCTTTATACATCAGTCTCAGGGATTTGTAGTTGCAATACAACATAAAACCAAAACGTCTGTGATTGCAGAAGAATATAGAGACATTCACAAGGTCTTGAAAATGAATGCCGTGTTCACTGTAAGCATGATTAGCACTCATAACTGTGTTAGTGTGACACTGAATTTACTGGTTGAACAGTGtccaaaaatctaaattaaaaataaataaataataaacctttttttatttaaaaacctttGAGGTATTCAGTATTCCCTAATTCTAGTGTTCTAACGAAGACCAGTGCAGTGTGTACTGTTAGCTTCTATTAGCTTTTGAGTAAATCCTCTTTACACTTTATGtgaattttttcccccttgccTAATGTGGCACCAGGAAGGAAAAGACAGTCATCAGTTACTGAAATCGCAAGGTCATTTGTCAAGAAAAACAAAGTTCAAATTCCAATTCAAACAAAGCTACATCTGGATTTAATAGCAGGAATGGGAACTGCAGGTCACTGACAGGTGCATAGCCTTACAAAATACTGAACAACAATCAAATTTAAACTAATCTGTAACCATATTAGTTAGTTGTCAGCTAAAGCTTAATGtagctttttttctgttatagaAGTGTCATTTGGttgatggagaaaaaaataaaacatttgactttta

Function

symbol description
fam169b Orthologous to human FAM169B (family with sequence similarity 169 member B).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034305028.1 True 1773 mRNA 0.42 9 14640960 14648967
XM_034305029.1 False 1709 mRNA 0.42 10 14640960 14648967
XM_034305030.1 False 1770 mRNA 0.42 9 14640960 14648967
XM_034305031.1 False 1584 mRNA 0.42 7 14640960 14648967

Neighbor

gene id symbol gene type direction distance location
pgpep1l pgpep1l coding upstream 107702 14528876 ~ 14533258 (+)
cftr cftr,LOC107738689,LOC107596947,LOC107583749 coding upstream 187884 14426532 ~ 14453076 (+)
bida NA coding upstream 276155 14355893 ~ 14364805 (+)
wee2 wee2 coding upstream 286040 14349167 ~ 14354920 (+)
agk agk coding upstream 305637 14325076 ~ 14335323 (+)
arpin arpin coding downstream 4948 14653915 ~ 14657137 (+)
kmt5b kmt5b,LOC108264420 coding downstream 27577 14676544 ~ 14686478 (+)
chka chka,LOC108424340,LOC107738676,LOC107726368 coding downstream 46810 14695777 ~ 14709427 (+)
hydin hydin,LOC108264797,LOC108264078,LOC108264799,LOC108263932 coding downstream 135973 14784940 ~ 14877479 (+)
necab2 necab2,LOC107672281,LOC106573751 coding downstream 236289 14885256 ~ 14969007 (+)
G99362 NA non-coding upstream 9599 14630335 ~ 14631361 (+)
G99276 ighmbp2 non-coding upstream 322306 14317597 ~ 14318654 (+)
G99261 NA non-coding upstream 378443 14261441 ~ 14262517 (+)
G99260 kif23 non-coding upstream 380218 14257912 ~ 14260742 (+)
G99006 NA non-coding upstream 650807 13989942 ~ 13990153 (+)
G99516 LOC108263939 non-coding downstream 76651 14725618 ~ 14725938 (+)
G99518 NA non-coding downstream 81017 14729984 ~ 14730183 (+)
G99704 NA non-coding downstream 377520 15026487 ~ 15027086 (+)
G99705 NA non-coding downstream 406300 15055267 ~ 15058771 (+)
G99766 NA non-coding downstream 522365 15171332 ~ 15173435 (+)
G99341 synm other upstream 116480 14520801 ~ 14524480 (+)
skor1b skor1 other upstream 598508 14035228 ~ 14042452 (+)
smad3b smad3,LOC108264458,LOC108424035,LOC107740443,LOC107755098 other upstream 684609 13932539 ~ 13956351 (+)
G98972 NA other upstream 851570 13785095 ~ 13789390 (+)
G98946 megf11 other upstream 925194 13691607 ~ 13715766 (+)
carmil2 carmil2,rltpr other downstream 651515 15300482 ~ 15346146 (+)
G100306 NA other downstream 1700490 16349457 ~ 16349787 (+)
G100345 NA other downstream 1951290 16600257 ~ 16601067 (+)
rgma NA other downstream 2008634 16657601 ~ 16680793 (+)
LOC117597546 LOC107707548,LOC106676627,LOC106676599,LOC106675328,LOC106675542,LOC107675252 other downstream 2751459 17400426 ~ 17443468 (+)

Expression


Co-expression Network