G124388



Basic Information


Item Value
gene id G124388
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 18106 ~ 25966 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU146898
GGGAGGCGGATCGGGGCCGACTGAGTTGCAACACTTTTGATAAACTGCAGCAGAAGTTGTTTTGAGGAAACACGAGCTCAGCATCACACTGCTGTAAATCCAACACAGATCAATGATTAATGACATCACAGACGaccttcagagagagagagagagagacagagacagagagagtgagacagacagagagagatacagacagagagagagagagagagtgtgagagagacagagagtgtgagagagagagatacagacagagagagagagagagagtgagacagatagagagggagagagagtgagacagatagagagggagagagagtgagacagatagagagggagagagagagagtgagacagatagaggagTGCagttaaatgtatatataaatctgTAGGTTTCTCCTCCGTGTTCTTCTCTTCACACTGCTGCAGCGTTCAGGTTCTAAAGCAGTGACGTTTTCCTGGAGTTGGAAGCTGTACTGAATCTGGCTTCTGAAGTTGTGCCAAAGGCTCTAAACGCTGTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU146898 True 534 lncRNA 0.47 2 18106 25966

Neighbor


gene id symbol gene type direction distance location
LOC117597813 NA coding downstream 190195 216161 ~ 217382 (+)
LOC117597814 NA coding downstream 235433 261399 ~ 264259 (+)
fpgt fpgt coding downstream 308937 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 316696 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 385023 410989 ~ 456088 (+)
G124397 NA non-coding downstream 17782 43748 ~ 43957 (+)
G124398 NA non-coding downstream 21354 47320 ~ 47548 (+)
G124400 NA non-coding downstream 26882 52848 ~ 54183 (+)
LOC117597791 NA non-coding downstream 28320 54286 ~ 57248 (+)
G124405 NA non-coding downstream 48076 74042 ~ 76052 (+)
G124399 NA other downstream 23012 48978 ~ 51072 (+)
G124403 NA other downstream 44107 70073 ~ 86083 (+)
G124442 NA other downstream 151696 177662 ~ 178417 (+)
G124462 NA other downstream 246451 272417 ~ 330399 (+)
G124498 NA other downstream 373790 399756 ~ 407434 (+)

Expression



Co-expression Network