G124397


Basic Information

Item Value
gene id G124397
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 43748 ~ 43957 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU146907
GTTAAATTCAGTAAACATATCAACAGTATACAGCGATTTACAGTGGAGGGGATAAGCAGCAAGTTCATTAACACCTGGGTCAAAGACGAAATATTCTACAGAGTTTCATTACGTCCCTGGACACTGCTATCGAACAGTGAGTGTGacatataatgtttataataaagttCATTCTAGTTcagaacaaataaaattttaaaaatactaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146907 True 210 lncRNA 0.33 1 43748 43957

Neighbor

gene id symbol gene type direction distance location
ipo11 ipo11 coding upstream 23110 112 ~ 20638 (+)
LOC117597813 NA coding downstream 172204 216161 ~ 217382 (+)
LOC117597814 NA coding downstream 217442 261399 ~ 264259 (+)
fpgt fpgt coding downstream 290946 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 298705 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 367032 410989 ~ 456088 (+)
G124385 NA non-coding upstream 14838 20663 ~ 28910 (+)
G124388 NA non-coding upstream 17782 18106 ~ 25966 (+)
G124398 NA non-coding downstream 3363 47320 ~ 47548 (+)
G124400 NA non-coding downstream 8891 52848 ~ 54183 (+)
LOC117597791 NA non-coding downstream 10329 54286 ~ 57248 (+)
G124405 NA non-coding downstream 30085 74042 ~ 76052 (+)
LOC117597868 NA non-coding downstream 50090 94047 ~ 96304 (+)
G124387 NA other upstream 20456 12688 ~ 23292 (+)
G124399 NA other downstream 5021 48978 ~ 51072 (+)
G124403 NA other downstream 26116 70073 ~ 86083 (+)
G124442 NA other downstream 133705 177662 ~ 178417 (+)
G124462 NA other downstream 228460 272417 ~ 330399 (+)
G124498 NA other downstream 355799 399756 ~ 407434 (+)

Expression


Co-expression Network