G124399


Basic Information

Item Value
gene id G124399
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 48978 ~ 51072 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU146909
CACGTGTCTCGGTTTGTGGGCGGAGTTTCTCTATGTGCAGCGCGTCATCATGCGGAACTCATAATACGtcaatctttaaaaaacagCGCCCGGTGTACAGACTGTGTGAGATgaagctgaggaggaggaggagagacaatCCCAAACAGGAGGCTGAATATTTCACATCTGCTGCCAAAGACAAGGAGGGATttgatgtgaaatatataaattcatttatagGACGTGGAGTATTcagttgtgttcattttgataaGGGAGATTTTCTTTTGGAGTACAGAGGACAACTCATAAACAAAGCTGAATGTGAACGACGACAGAAGTTATATCACGATGCCATGAAAGTATTCATGTATGAATTCCGTTTCAATGGAAGACTCTTATGTGTCGATGCTTCCAGAGAAGATGGTTCCCTTGGGAGACTTGTCAATGATGACCACATCAgcccaaacagcaaaatgaaaataatcactgtagaGGGAAAGCctcatctgtgtttatttgcgaCTAGGAGCATCGACCCTGGAGAAGAAATCACATACGATTATGGCAATTCTGAGTTGCCTTGGAGAAATAAGATTGTAGCTGAAGAACACCAACTGCCACCAGAGGAAAACAGCACTATGGCATTGAGTGAGGCCAGGAGGGTGAAAGACAATCAGTC

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0021532 neural tube patterning biological_process
GO:0007275 multicellular organism development biological_process
GO:0021903 rostrocaudal neural tube patterning biological_process
GO:0048856 anatomical structure development biological_process
GO:0021915 neural tube development biological_process
GO:0007399 nervous system development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0007417 central nervous system development biological_process
GO:0030917 midbrain-hindbrain boundary development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146909 True 664 TUCP 0.43 5 48978 51072

Neighbor

gene id symbol gene type direction distance location
ipo11 ipo11 coding upstream 28340 112 ~ 20638 (+)
LOC117597813 NA coding downstream 165089 216161 ~ 217382 (+)
LOC117597814 NA coding downstream 210327 261399 ~ 264259 (+)
fpgt fpgt coding downstream 283831 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 291590 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 359917 410989 ~ 456088 (+)
G124398 NA non-coding upstream 1430 47320 ~ 47548 (+)
G124397 NA non-coding upstream 5021 43748 ~ 43957 (+)
G124385 NA non-coding upstream 20068 20663 ~ 28910 (+)
G124388 NA non-coding upstream 23012 18106 ~ 25966 (+)
G124400 NA non-coding downstream 1776 52848 ~ 54183 (+)
LOC117597791 NA non-coding downstream 3214 54286 ~ 57248 (+)
G124405 NA non-coding downstream 22970 74042 ~ 76052 (+)
LOC117597868 NA non-coding downstream 42975 94047 ~ 96304 (+)
LOC113525545 LOC108263117,LOC108268894,LOC108270753,LOC108273545,LOC108264971,LOC108273692,LOC108273546 non-coding downstream 45296 96368 ~ 103306 (+)
G124387 NA other upstream 25686 12688 ~ 23292 (+)
G124403 NA other downstream 19001 70073 ~ 86083 (+)
G124442 NA other downstream 126590 177662 ~ 178417 (+)
G124462 NA other downstream 221345 272417 ~ 330399 (+)
G124498 NA other downstream 348684 399756 ~ 407434 (+)
si:ch73-70k4.1 LOC108265358 other downstream 455992 507064 ~ 508910 (+)

Expression


Co-expression Network