G124451


Basic Information

Item Value
gene id G124451
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 197931 ~ 200943 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU146983
cacacacacacggagaacacacacacacggagaacacacacacggagaaccTCCTCACCTCCACGACGGTGATCTTGGCTGCTTTACACATGGGCTGGTTGAAGTTTCTGGCagtttttctgaagatgatgtttcCCGCTCTATCCGCTTTCCACGCTTTCACCAGAGCGAAATCTCCTGTAATCGCCTCCTCCATCACAAAGTGTCGCCCTCCAAACTCACGCAcctgatacacacatacacacacatcacacacacaacacacacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146983 True 270 lncRNA 0.51 3 197931 200943

Neighbor

gene id symbol gene type direction distance location
ipo11 ipo11 coding upstream 177293 112 ~ 20638 (+)
LOC117597813 NA coding downstream 15218 216161 ~ 217382 (+)
LOC117597814 NA coding downstream 60456 261399 ~ 264259 (+)
fpgt fpgt coding downstream 133960 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 141719 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 210046 410989 ~ 456088 (+)
G124432 NA non-coding upstream 733 154481 ~ 197198 (+)
G124444 NA non-coding upstream 16264 180416 ~ 181667 (+)
G124437 NA non-coding upstream 30632 165164 ~ 167299 (+)
G124416 NA non-coding upstream 65216 132234 ~ 132715 (+)
LOC117597797 LOC108268894,LOC108261282,LOC108273219,LOC108273545 non-coding upstream 89121 104204 ~ 108810 (+)
G124453 NA non-coding downstream 6328 207271 ~ 230868 (+)
LOC117597786 NA non-coding downstream 7218 208161 ~ 209413 (+)
G124481 NA non-coding downstream 140495 341438 ~ 341758 (+)
G124499 NA non-coding downstream 199972 400915 ~ 402096 (+)
G124506 NA non-coding downstream 235219 436162 ~ 436973 (+)
G124442 NA other upstream 19514 177662 ~ 178417 (+)
G124403 NA other upstream 111848 70073 ~ 86083 (+)
G124399 NA other upstream 146859 48978 ~ 51072 (+)
G124387 NA other upstream 174639 12688 ~ 23292 (+)
G124462 NA other downstream 71474 272417 ~ 330399 (+)
G124498 NA other downstream 198813 399756 ~ 407434 (+)
si:ch73-70k4.1 LOC108265358 other downstream 306121 507064 ~ 508910 (+)
cept1a LOC108265319 other downstream 404916 605859 ~ 658563 (+)
G124541 cept1a,LOC108265319 other downstream 445023 645966 ~ 647953 (+)

Expression


Co-expression Network