G124453


Basic Information

Item Value
gene id G124453
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 207271 ~ 230868 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU146989
cttgatctttccctaacctaacctaGCCTGTGCCACTACAAACAAAAGAGAGGAACAGACCATATTCTTAGTACACACCTTAcatatttagttatattttaattattttacttttattgttttaatctcTTAATCTTTATCCTATTTGGTTTTAtcacctttttttattattccatttttatcctttcccccctttttttttccttactattctttatttctaaggttttttatttttttttttaatacccacTCTTTTTCCAGTACATTTGTGTTCAATGGCAGTCTTCTTATTCTTGGCTCTCTTCTCTTGCCTGCTGTGGGTCTTGAACCAGGGAGGCTGGGTGTAGGAGACTATTGTCTATACCACTACACCACACAGACTACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146989 True 390 lncRNA 0.34 3 207271 230868

Neighbor

gene id symbol gene type direction distance location
ipo11 ipo11 coding upstream 186633 112 ~ 20638 (+)
LOC117597814 NA coding downstream 30531 261399 ~ 264259 (+)
fpgt fpgt coding downstream 104035 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 111794 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 180121 410989 ~ 456088 (+)
LOC113541233 nceh1 coding downstream 236893 467761 ~ 478047 (+)
G124451 NA non-coding upstream 6328 197931 ~ 200943 (+)
G124432 NA non-coding upstream 10073 154481 ~ 197198 (+)
G124444 NA non-coding upstream 25604 180416 ~ 181667 (+)
G124437 NA non-coding upstream 39972 165164 ~ 167299 (+)
G124416 NA non-coding upstream 74556 132234 ~ 132715 (+)
G124481 NA non-coding downstream 110570 341438 ~ 341758 (+)
G124499 NA non-coding downstream 170047 400915 ~ 402096 (+)
G124506 NA non-coding downstream 205294 436162 ~ 436973 (+)
G124511 NA non-coding downstream 230644 461512 ~ 466459 (+)
G124512 NA non-coding downstream 232711 463579 ~ 464969 (+)
G124442 NA other upstream 28854 177662 ~ 178417 (+)
G124403 NA other upstream 121188 70073 ~ 86083 (+)
G124399 NA other upstream 156199 48978 ~ 51072 (+)
G124387 NA other upstream 183979 12688 ~ 23292 (+)
G124462 NA other downstream 41549 272417 ~ 330399 (+)
G124498 NA other downstream 168888 399756 ~ 407434 (+)
si:ch73-70k4.1 LOC108265358 other downstream 276196 507064 ~ 508910 (+)
cept1a LOC108265319 other downstream 374991 605859 ~ 658563 (+)
G124541 cept1a,LOC108265319 other downstream 415098 645966 ~ 647953 (+)

Expression


Co-expression Network