G124481


Basic Information

Item Value
gene id G124481
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 341438 ~ 341758 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU147026
GTTCTGTTGTTTGTGctttacactgaagacatttgggtttgagatcaaaagatgaatatgagacgatagatcagaatttcagctttcatttcctgatatttacatctagacgcgttaaacaacttagaacacggcacacagtttattattaaagtgaATAACACTTATATTTGTAATACAGtgatatttggttgcatatcccttgcaataactgcatcaagccggcgagccactgacatcaccaaccTGCtgcattctgctgctaccatcatgagctccatcatcaggaaagattagtgagtctgcaGCCATGCAAACCcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147026 True 321 lncRNA 0.40 1 341438 341758

Neighbor

gene id symbol gene type direction distance location
fpgt fpgt coding upstream 352 334903 ~ 341086 (+)
LOC117597814 NA coding upstream 77179 261399 ~ 264259 (+)
LOC117597813 NA coding upstream 124056 216161 ~ 217382 (+)
ipo11 ipo11 coding upstream 320800 112 ~ 20638 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 904 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 69231 410989 ~ 456088 (+)
LOC113541233 nceh1 coding downstream 126003 467761 ~ 478047 (+)
tnfsf10 tnfsf10,LOC108261837,LOC107663625,LOC107590350 coding downstream 148687 490445 ~ 494112 (+)
LOC113525715 ski,LOC108265356,LOC107599811,LOC106937962 coding downstream 173552 515310 ~ 534999 (+)
G124453 NA non-coding upstream 110570 207271 ~ 230868 (+)
LOC117597786 NA non-coding upstream 132025 208161 ~ 209413 (+)
G124451 NA non-coding upstream 140495 197931 ~ 200943 (+)
G124432 NA non-coding upstream 144240 154481 ~ 197198 (+)
G124444 NA non-coding upstream 159771 180416 ~ 181667 (+)
G124499 NA non-coding downstream 59157 400915 ~ 402096 (+)
G124506 NA non-coding downstream 94404 436162 ~ 436973 (+)
G124511 NA non-coding downstream 119754 461512 ~ 466459 (+)
G124512 NA non-coding downstream 121821 463579 ~ 464969 (+)
G124517 NA non-coding downstream 148109 489867 ~ 490074 (+)
G124462 NA other upstream 11039 272417 ~ 330399 (+)
G124442 NA other upstream 163021 177662 ~ 178417 (+)
G124403 NA other upstream 255355 70073 ~ 86083 (+)
G124399 NA other upstream 290366 48978 ~ 51072 (+)
G124387 NA other upstream 318146 12688 ~ 23292 (+)
G124498 NA other downstream 57998 399756 ~ 407434 (+)
si:ch73-70k4.1 LOC108265358 other downstream 165306 507064 ~ 508910 (+)
cept1a LOC108265319 other downstream 264101 605859 ~ 658563 (+)
G124541 cept1a,LOC108265319 other downstream 304208 645966 ~ 647953 (+)
G124565 NA other downstream 362831 704589 ~ 705857 (+)

Expression


Co-expression Network