G124499


Basic Information

Item Value
gene id G124499
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 400915 ~ 402096 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU147051
atgagaggatgatggtgatgagtgaAGGATGGTGatgagaggatgatggtgatgagtgaAGGACGGTGatgagaggatgatggtgatgagtgaAGGACGGTGatgagaggatgatggtgatgagtgaAAGGCGGTGATGAGAGGATGGCGATGatgagaggatgatggtgatgagtgaAGGACAGTGatgagaggatgatggtgatgagtgaAGGACGGTGatgagaggatgatggtgatgagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147051 True 246 lncRNA 0.49 2 400915 402096

Neighbor

gene id symbol gene type direction distance location
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding upstream 34134 342662 ~ 366781 (+)
fpgt fpgt coding upstream 59829 334903 ~ 341086 (+)
LOC117597814 NA coding upstream 136656 261399 ~ 264259 (+)
LOC117597813 NA coding upstream 183533 216161 ~ 217382 (+)
ipo11 ipo11 coding upstream 380277 112 ~ 20638 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 8893 410989 ~ 456088 (+)
LOC113541233 nceh1 coding downstream 65665 467761 ~ 478047 (+)
tnfsf10 tnfsf10,LOC108261837,LOC107663625,LOC107590350 coding downstream 88349 490445 ~ 494112 (+)
LOC113525715 ski,LOC108265356,LOC107599811,LOC106937962 coding downstream 113214 515310 ~ 534999 (+)
spag17 NA coding downstream 324696 726792 ~ 758536 (+)
G124481 NA non-coding upstream 59157 341438 ~ 341758 (+)
G124453 NA non-coding upstream 170047 207271 ~ 230868 (+)
LOC117597786 NA non-coding upstream 191502 208161 ~ 209413 (+)
G124451 NA non-coding upstream 199972 197931 ~ 200943 (+)
G124432 NA non-coding upstream 203717 154481 ~ 197198 (+)
G124506 NA non-coding downstream 34066 436162 ~ 436973 (+)
G124511 NA non-coding downstream 59416 461512 ~ 466459 (+)
G124512 NA non-coding downstream 61483 463579 ~ 464969 (+)
G124517 NA non-coding downstream 87771 489867 ~ 490074 (+)
G124519 NA non-coding downstream 92796 494892 ~ 517899 (+)
G124462 NA other upstream 70516 272417 ~ 330399 (+)
G124442 NA other upstream 222498 177662 ~ 178417 (+)
G124403 NA other upstream 314832 70073 ~ 86083 (+)
G124399 NA other upstream 349843 48978 ~ 51072 (+)
G124387 NA other upstream 377623 12688 ~ 23292 (+)
si:ch73-70k4.1 LOC108265358 other downstream 104968 507064 ~ 508910 (+)
cept1a LOC108265319 other downstream 203763 605859 ~ 658563 (+)
G124541 cept1a,LOC108265319 other downstream 243870 645966 ~ 647953 (+)
G124565 NA other downstream 302493 704589 ~ 705857 (+)
dennd2da dennd2d,LOC108265321,LOC108413600 other downstream 375868 777964 ~ 821367 (+)

Expression


Co-expression Network