Gene
RNA
| Item | Value |
|---|---|
| gene id | G124506 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 436162 ~ 436973 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147065 | True | 581 | lncRNA | 0.41 | 2 | 436162 | 436973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tnni3k | tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 | coding | upstream | 69381 | 342662 ~ 366781 (+) |
| fpgt | fpgt | coding | upstream | 95076 | 334903 ~ 341086 (+) |
| LOC117597814 | NA | coding | upstream | 171903 | 261399 ~ 264259 (+) |
| LOC117597813 | NA | coding | upstream | 218780 | 216161 ~ 217382 (+) |
| ipo11 | ipo11 | coding | upstream | 415524 | 112 ~ 20638 (+) |
| LOC113541233 | nceh1 | coding | downstream | 30788 | 467761 ~ 478047 (+) |
| tnfsf10 | tnfsf10,LOC108261837,LOC107663625,LOC107590350 | coding | downstream | 53472 | 490445 ~ 494112 (+) |
| LOC113525715 | ski,LOC108265356,LOC107599811,LOC106937962 | coding | downstream | 78337 | 515310 ~ 534999 (+) |
| spag17 | NA | coding | downstream | 289819 | 726792 ~ 758536 (+) |
| LOC117597816 | LOC108265208 | coding | downstream | 322328 | 759301 ~ 777486 (+) |
| G124499 | NA | non-coding | upstream | 34066 | 400915 ~ 402096 (+) |
| G124481 | NA | non-coding | upstream | 94404 | 341438 ~ 341758 (+) |
| G124453 | NA | non-coding | upstream | 205294 | 207271 ~ 230868 (+) |
| LOC117597786 | NA | non-coding | upstream | 226749 | 208161 ~ 209413 (+) |
| G124451 | NA | non-coding | upstream | 235219 | 197931 ~ 200943 (+) |
| G124511 | NA | non-coding | downstream | 24539 | 461512 ~ 466459 (+) |
| G124512 | NA | non-coding | downstream | 26606 | 463579 ~ 464969 (+) |
| G124517 | NA | non-coding | downstream | 52894 | 489867 ~ 490074 (+) |
| G124519 | NA | non-coding | downstream | 57919 | 494892 ~ 517899 (+) |
| G124520 | NA | non-coding | downstream | 66475 | 503448 ~ 503792 (+) |
| G124498 | NA | other | upstream | 28728 | 399756 ~ 407434 (+) |
| G124462 | NA | other | upstream | 105763 | 272417 ~ 330399 (+) |
| G124442 | NA | other | upstream | 257745 | 177662 ~ 178417 (+) |
| G124403 | NA | other | upstream | 350079 | 70073 ~ 86083 (+) |
| G124399 | NA | other | upstream | 385090 | 48978 ~ 51072 (+) |
| si:ch73-70k4.1 | LOC108265358 | other | downstream | 70091 | 507064 ~ 508910 (+) |
| cept1a | LOC108265319 | other | downstream | 168886 | 605859 ~ 658563 (+) |
| G124541 | cept1a,LOC108265319 | other | downstream | 208993 | 645966 ~ 647953 (+) |
| G124565 | NA | other | downstream | 267616 | 704589 ~ 705857 (+) |
| dennd2da | dennd2d,LOC108265321,LOC108413600 | other | downstream | 340991 | 777964 ~ 821367 (+) |
