znf692 (znf692)


Basic Information

Item Value
gene id znf692
gene name znf692
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 3336380 ~ 3347747 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU148573
tgggcTTGCCATGGTTATTTTGGCTTCCATGACGGGCATTAAAACAAATCATGAATTAAactgtatgcttttttttcatgctgGATTAATTGACACTACTGTGGACGTTTTTTCGTCTTTATTGTGGTTTTATTATTCGCTGAAAGTCGGCTTGCTTGCTTAAAAGGGCAACGGAGAAGAGCAGTGCGTTTATTTGTTCTCTCCATCATCTCCATGGCGTCGAATAAAGAGGCTCAGCGCAGGCAGCGGCGTAGAGAGCTGGACGCTAGAAGGAGTAAGTTTCGTGTGCGACTCGGCTCATGGCCGGAGAGCTGGAGTAAACTGAAGGACCAGCTGGGTTTCTCTCTCCACTCAGAGCTTGCACAGTTCCTGCTGGACAGGTAAAGATGGAGCTGTAGTAGAAATATAAAGTCCCAGGAAACTAAAGTcttcagtaaggaataaaa
>XM_026927946.2
TgttaacacacacttcctgtttttttttttttttttttatctgggcTTGCCATGGTTATTTTGGCTTCCATGACGGGCATTAAAACAAATCATGAATTAAactgtatgcttttttttcatgctgGATTAATTGACACTACTGTGGACGTTTTTTCGTCTTTATTGTGGTTTTATTATTCGCTGAAAGTCGGCTTGCTTGCTTAAAAGGGCAACGGAGAAGAGCAGGTGGGGCCCACTCTCAAAAAAGCCTGTATGACGAGTGCGTTTATTTGTTCTCTCCATCATCTCCATGGCGTCGAATAAAGAGGCTCAGCGCAGGCAGCGGCGTAGAGAGCTGGACGCTAGAAGGAGTAAGTTTCGTGTGCGACTCGGCTCATGGCCGGAGAGCTGGAGTAAACTGAAGGACCAGCTGGGTTTCTCTCTCCACTCAGAGCTTGCACAGTTCCTGCTGGACAGttACTCCTGCAAAGTGTGCAGCAGGTGTTCAGGTGATGGGAAGGAAGTAATCTCAGTAACTGTGGCTTCTCTGGATCAGCTGATCCTGCTGGTCCACAGTCACGGACAGCAGTGCCCTTTGACCCCAAACCTGCAGTCTgacccacacagacaggaagtgaaggaGAGAACGCTGGAGGAAGATCCTGAAACTTCCACGAGGTCATCTGAAGCAGCTGAAGCAGAACTGTGCCTTACGTACGTCTGTGAAGGTGGACACACGTTCACCTGGCGTCCGATACACACCCAGAGGGATGATAATGGAGAGAAGAGTGAGCAAGGAAGCGCTGCTccttcaggccagaggaaaatCAGAGAACGACGGAGGAAAGGAGTGAAGCGAGAGGAGGAGGTATGCAGGatgaggagcaggaggagcacAAGAGGAAGATCTGTCTCTGATGGAAACACTGCTGGATTCAGACGGAGCGATGAGACAGAGCAAGTCACCCCATCCTCCTCAGGAGAGAATGAGGAAGCAGAATATTTGTGTCACAGCGATGCAGTGCAGCATGAACAGGATGCAGGTTCACAGGAAGGAAGTGATGCGGCTCTTCTCATCTTGCCCCCAAAGATCAGCGCTGAGGCCGAGGCTGATGACTGTCAGAATATCAGAGATATTGAAATTCAGGACTCTGTCGAAAGGGTCGCAGGTTCACACATGCAGTATGACAGAGAGCTTCCTGACTCCAGCAGGGATGTTGTATGGGATGCAATACCAAACTCAACCACGAGGGAGCGTGAGAGGAGAGAAGATGTTCCTGAGACGAGCAAAACCGAGGAGCCGAGGATGAGAGCGAGGAGAAAAACCAACAGACAACCGTCACAGAAAGACGAGCTTTTGAAGATAAGCGGCAGAAGGAAAAGAAAACCAGCTCCGAAGCTCATTTTACCCTGCGAGTTTGACGGCTGCTGGAAAATATTTTCAAGTCGTCAGTACCTCAACCACCACATGAAGTACCAGCACTTCCAGCAGAAGACCTTCTCTTGCTCCAATGCCTCCTGTGGAAAATCATTCAACTTTAAGAAGCACCTTAAAGAGCACGAGAAGCTGCACAGCGatcAGAGAGACTACATCTGTGAGTTCTGTGCTCGTGCCTTCCGCACCAGCAGCAACCTGAGCATCCACCGCAGAATCCATACTGGAGAGAAACCACTGCAGTGCGAGGTGTGTGGCTTCACTTGTCGTCAGAAGGCCTCTCTGAACTGGCACATGCGTAAACACGATGCCGAGCGCAGCTACCAGTTTGCGTGCGAGATCTGCGGCCGCCGCTTTGAGAAGAGGGACAACGTGACTGCTCATCAGAGTAAAAGTCACCCAGATCACGTGACCTCTGACCTTCCTAAAGAGCCTACAGCCAACGACCTTTGACCTACTTGAGGCTGGAGTTATAATTAAGCTTGTGCCAATAATAAACATTCACGTCATGATTATTACCTAACTCTTA
>XM_026927947.2
TgttaacacacacttcctgtttttttttttttttttttatctgggcTTGCCATGGTTATTTTGGCTTCCATGACGGGCATTAAAACAAATCATGAATTAAactgtatgcttttttttcatgctgGATTAATTGACACTACTGTGGACGTTTTTTCGTCTTTATTGTGGTTTTATTATTCGCTGAAAGTCGGCTTGCTTGCTTAAAAGGGCAACGGAGAAGAGCAGTGCGTTTATTTGTTCTCTCCATCATCTCCATGGCGTCGAATAAAGAGGCTCAGCGCAGGCAGCGGCGTAGAGAGCTGGACGCTAGAAGGAGTAAGTTTCGTGTGCGACTCGGCTCATGGCCGGAGAGCTGGAGTAAACTGAAGGACCAGCTGGGTTTCTCTCTCCACTCAGAGCTTGCACAGTTCCTGCTGGACAGttACTCCTGCAAAGTGTGCAGCAGGTGTTCAGGTGATGGGAAGGAAGTAATCTCAGTAACTGTGGCTTCTCTGGATCAGCTGATCCTGCTGGTCCACAGTCACGGACAGCAGTGCCCTTTGACCCCAAACCTGCAGTCTgacccacacagacaggaagtgaaggaGAGAACGCTGGAGGAAGATCCTGAAACTTCCACGAGGTCATCTGAAGCAGCTGAAGCAGAACTGTGCCTTACGTACGTCTGTGAAGGTGGACACACGTTCACCTGGCGTCCGATACACACCCAGAGGGATGATAATGGAGAGAAGAGTGAGCAAGGAAGCGCTGCTccttcaggccagaggaaaatCAGAGAACGACGGAGGAAAGGAGTGAAGCGAGAGGAGGAGGTATGCAGGatgaggagcaggaggagcacAAGAGGAAGATCTGTCTCTGATGGAAACACTGCTGGATTCAGACGGAGCGATGAGACAGAGCAAGTCACCCCATCCTCCTCAGGAGAGAATGAGGAAGCAGAATATTTGTGTCACAGCGATGCAGTGCAGCATGAACAGGATGCAGGTTCACAGGAAGGAAGTGATGCGGCTCTTCTCATCTTGCCCCCAAAGATCAGCGCTGAGGCCGAGGCTGATGACTGTCAGAATATCAGAGATATTGAAATTCAGGACTCTGTCGAAAGGGTCGCAGGTTCACACATGCAGTATGACAGAGAGCTTCCTGACTCCAGCAGGGATGTTGTATGGGATGCAATACCAAACTCAACCACGAGGGAGCGTGAGAGGAGAGAAGATGTTCCTGAGACGAGCAAAACCGAGGAGCCGAGGATGAGAGCGAGGAGAAAAACCAACAGACAACCGTCACAGAAAGACGAGCTTTTGAAGATAAGCGGCAGAAGGAAAAGAAAACCAGCTCCGAAGCTCATTTTACCCTGCGAGTTTGACGGCTGCTGGAAAATATTTTCAAGTCGTCAGTACCTCAACCACCACATGAAGTACCAGCACTTCCAGCAGAAGACCTTCTCTTGCTCCAATGCCTCCTGTGGAAAATCATTCAACTTTAAGAAGCACCTTAAAGAGCACGAGAAGCTGCACAGCGatcAGAGAGACTACATCTGTGAGTTCTGTGCTCGTGCCTTCCGCACCAGCAGCAACCTGAGCATCCACCGCAGAATCCATACTGGAGAGAAACCACTGCAGTGCGAGGTGTGTGGCTTCACTTGTCGTCAGAAGGCCTCTCTGAACTGGCACATGCGTAAACACGATGCCGAGCGCAGCTACCAGTTTGCGTGCGAGATCTGCGGCCGCCGCTTTGAGAAGAGGGACAACGTGACTGCTCATCAGAGTAAAAGTCACCCAGATCACGTGACCTCTGACCTTCCTAAAGAGCCTACAGCCAACGACCTTTGACCTACTTGAGGCTGGAGTTATAATTAAGCTTGTGCCAATAATAAACATTCACGTCATGATTATTACCTAACTCTTA
>XM_026927948.2
gttaacacacacttcctgtttttttttttttttttttatctgggcTTGCCATGGTTATTTTGGCTTCCATGACGGGCATTAAAACAAATCATGAATTAAactgtatgcttttttttcatgctgGATTAATTGACACTACTGTGGACGTTTTTTCGTCTTTATTGTGGTTTTATTATTCGCTGAAAGTCGGCTTGCTTGCTTAAAAGGGCAACGGAGAAGAGCAGGTGGGGCCCACTCTCAAAAAAGCCTGTATGACGAGTGCGTTTATTTGTTCTCTCCATCATCTCCATGGCGTCGAATAAAGAGGCTCAGCGCAGGCAGCGGCGTAGAGAGCTGGACGCTAGAAGGAGTAAGTTTCGTGTGCGACTCGGCTCATGGCCGGAGAGCTGGAGTAAACTGAAGGACCAGCTGGGTTTCTCTCTCCACTCAGAGCTTGCACAGTTCCTGCTGGACAGttACTCCTGCAAAGTGTGCAGCAGGTGTTCAGGTGATGGGAAGGAAGTAATCTCAGTAACTGTGGCTTCTCTGGATCAGCTGATCCTGCTGGTCCACAGTCACGGACAGCAGTGCCCTTTGACCCCAAACCTGCAGTCTgacccacacagacaggaagtgaaggaGAGAACGCTGGAGGAAGATCCTGAAACTTCCACGAGGTCATCTGAAGCAGCTGAAGCAGAACTGTGCCTTACGTACGTCTGTGAAGGTGGACACACGTTCACCTGGCGTCCGATACACACCCAGAGGGATGATAATGGAGAGAAGAGTGAGCAAGGAAGCGCTGCTccttcaggccagaggaaaatCAGAGAACGACGGAGGAAAGGAGTGAAGCGAGAGGAGGAGGTATGCAGGatgaggagcaggaggagcacAAGAGGAAGATCTGTCTCTGATGGAAACACTGCTGGATTCAGACGGAGCGATGAGACAGAGCAAGTCACCCCATCCTCCTCAGGAGAGAATGAGGAAGCAGAATATTTGTGTCACAGCGATGCAGTGCAGCATGAACAGGATGCAGGTTCACAGGAAGGAAGTGATGCGGCTCTTCTCATCTTGCCCCCAAAGATCAGCGCTGAGGCCGAGGCTGATGACTGTCAGAATATCAGAGATATTGAAATTCAGGACTCTGTCGAAAGCAGGGATGTTGTATGGGATGCAATACCAAACTCAACCACGAGGGAGCGTGAGAGGAGAGAAGATGTTCCTGAGACGAGCAAAACCGAGGAGCCGAGGATGAGAGCGAGGAGAAAAACCAACAGACAACCGTCACAGAAAGACGAGCTTTTGAAGATAAGCGGCAGAAGGAAAAGAAAACCAGCTCCGAAGCTCATTTTACCCTGCGAGTTTGACGGCTGCTGGAAAATATTTTCAAGTCGTCAGTACCTCAACCACCACATGAAGTACCAGCACTTCCAGCAGAAGACCTTCTCTTGCTCCAATGCCTCCTGTGGAAAATCATTCAACTTTAAGAAGCACCTTAAAGAGCACGAGAAGCTGCACAGCGatcAGAGAGACTACATCTGTGAGTTCTGTGCTCGTGCCTTCCGCACCAGCAGCAACCTGAGCATCCACCGCAGAATCCATACTGGAGAGAAACCACTGCAGTGCGAGGTGTGTGGCTTCACTTGTCGTCAGAAGGCCTCTCTGAACTGGCACATGCGTAAACACGATGCCGAGCGCAGCTACCAGTTTGCGTGCGAGATCTGCGGCCGCCGCTTTGAGAAGAGGGACAACGTGACTGCTCATCAGAGTAAAAGTCACCCAGATCACGTGACCTCTGACCTTCCTAAAGAGCCTACAGCCAACGACCTTTGACCTACTTGAGGCTGGAGTTATAATTAAGCTTGTGCCAATAATAAACATTCACGTCATGATTATTACCTAACTCTTA
>XM_026927949.2
gttaacacacacttcctgtttttttttttttttttttatctgggcTTGCCATGGTTATTTTGGCTTCCATGACGGGCATTAAAACAAATCATGAATTAAactgtatgcttttttttcatgctgGATTAATTGACACTACTGTGGACGTTTTTTCGTCTTTATTGTGGTTTTATTATTCGCTGAAAGTCGGCTTGCTTGCTTAAAAGGGCAACGGAGAAGAGCAGGTGGGGCCCACTCTCAAAAAAGCCTGTATGACGAGTGCGTTTATTTGTTCTCTCCATCATCTCCATGGCGTCGAATAAAGAGGCTCAGCGCAGGCAGCGGCGTAGAGAGCTGGACGCTAGAAGGAGTAAGTTTCGTGTGCGACTCGGCTCATGGCCGGAGAGCTGGAGTAAACTGAAGGACCAGCTGGGTTTCTCTCTCCACTCAGAGCTTGCACAGTTCCTGCTGGACAGttACTCCTGCAAAGTGTGCAGCAGGTGTTCAGGTGATGGGAAGGAAGTAATCTCAGTAACTGTGGCTTCTCTGGATCAGCTGATCCTGCTGGTCCACAGTCACGGACAGCAGTGCCCTTTGACCCCAAACCTGCAGTCTgacccacacagacaggaagtgaaggaGAGAACGCTGGAGGAAGATCCTGAAACTTCCACGAGGTCATCTGAAGCAGCTGAAGCAGAACTGTGCCTTACGTACGTCTGTGAAGGTGGACACACGTTCACCTGGCGTCCGATACACACCCAGAGGGATGATAATGGAGAGAAGAGTGAGCAAGGAAGCGCTGCTccttcaggccagaggaaaatCAGAGAACGACGGAGGAAAGGAGTGAAGCGAGAGGAGGAGGTATGCAGGatgaggagcaggaggagcacAAGAGGAAGATCTGTCTCTGATGGAAACACTGCTGGATTCAGACGGAGCGATGAGACAGAGCAAGTCACCCCATCCTCCTCAGGAGAGAATGAGGAAGCAGAATATTTGTGTCACAGCGATGCAGTGCAGCATGAACAGGATGCAGGTTCACAGGAAGGAAGTGATGCGGCTCTTCTCATCTTGCCCCCAAAGATCAGCGCTGAGGCCGAGGCTGATGACTGTCAGAATATCAGAGATATTGAAATTCAGGACTCTGTCGAAAGGGATGTTGTATGGGATGCAATACCAAACTCAACCACGAGGGAGCGTGAGAGGAGAGAAGATGTTCCTGAGACGAGCAAAACCGAGGAGCCGAGGATGAGAGCGAGGAGAAAAACCAACAGACAACCGTCACAGAAAGACGAGCTTTTGAAGATAAGCGGCAGAAGGAAAAGAAAACCAGCTCCGAAGCTCATTTTACCCTGCGAGTTTGACGGCTGCTGGAAAATATTTTCAAGTCGTCAGTACCTCAACCACCACATGAAGTACCAGCACTTCCAGCAGAAGACCTTCTCTTGCTCCAATGCCTCCTGTGGAAAATCATTCAACTTTAAGAAGCACCTTAAAGAGCACGAGAAGCTGCACAGCGatcAGAGAGACTACATCTGTGAGTTCTGTGCTCGTGCCTTCCGCACCAGCAGCAACCTGAGCATCCACCGCAGAATCCATACTGGAGAGAAACCACTGCAGTGCGAGGTGTGTGGCTTCACTTGTCGTCAGAAGGCCTCTCTGAACTGGCACATGCGTAAACACGATGCCGAGCGCAGCTACCAGTTTGCGTGCGAGATCTGCGGCCGCCGCTTTGAGAAGAGGGACAACGTGACTGCTCATCAGAGTAAAAGTCACCCAGATCACGTGACCTCTGACCTTCCTAAAGAGCCTACAGCCAACGACCTTTGACCTACTTGAGGCTGGAGTTATAATTAAGCTTGTGCCAATAATAAACATTCACGTCATGATTATTACCTAACTCTTA

Function

symbol description
znf692 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF692 (zinc finger protein 692).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148573 False 446 lncRNA 0.45 2 3336421 3338476
XM_026927946.2 True 1943 mRNA 0.50 12 3336380 3347747
XM_026927947.2 False 1908 mRNA 0.49 12 3336380 3347747
XM_026927948.2 False 1894 mRNA 0.49 12 3336381 3347747
XM_026927949.2 False 1891 mRNA 0.49 12 3336381 3347747

Neighbor

gene id symbol gene type direction distance location
foxd2 foxd1,LOC108265081,LOC103022344 coding upstream 238156 3089581 ~ 3098224 (+)
foxe3 LOC108265253 coding upstream 249199 3077120 ~ 3087181 (+)
slc35a3a slc35a3,LOC108439387,LOC100705874,LOC102790943,LOC101471768 coding upstream 281316 3036229 ~ 3055064 (+)
notch2 LOC108265554 coding upstream 304655 2951421 ~ 3031725 (+)
sec22bb sec22b,sec22bb,LOC108265393,LOC101168279,LOC100705437,LOC103354218,LOC108439390 coding upstream 410048 2920866 ~ 2926332 (+)
fcho1 fcho1,LOC108264992,LOC107751067,LOC103395380,LOC100695123 coding downstream 2065 3349812 ~ 3399427 (+)
LOC113534995 LOC108264986,LOC108439652,LOC107695253,LOC107585931,LOC107548917,LOC107676994 coding downstream 286953 3634700 ~ 3658044 (+)
mob3a LOC108264984,LOC108439653,LOC100699828,LOC102783145,LOC107585875,LOC104921817,LOC103368804,LOC101067073,LOC107731185 coding downstream 312103 3659850 ~ 3671689 (+)
haus5 haus5 coding downstream 430550 3778297 ~ 3791621 (+)
dohh dohh,LOC106584359,LOC107745802 coding downstream 454909 3802656 ~ 3807484 (+)
G125626 NA non-coding upstream 108716 2993850 ~ 3227664 (+)
G125593 NA non-coding upstream 480605 2854757 ~ 2855775 (+)
G125484 rgl1,LOC107717560 non-coding upstream 590817 2705841 ~ 2745563 (+)
G125525 NA non-coding upstream 594096 2741998 ~ 2742284 (+)
G125509 LOC108265600 non-coding upstream 614498 2719032 ~ 2721882 (+)
G126401 NA non-coding downstream 221242 3568989 ~ 3575303 (+)
G126408 NA non-coding downstream 282055 3629802 ~ 3631632 (+)
LOC117597831 NA non-coding downstream 371595 3719342 ~ 3735098 (+)
G126461 NA non-coding downstream 454797 3802544 ~ 3843737 (+)
LOC117597875 NA non-coding downstream 461509 3809256 ~ 3816185 (+)
LOC113535041 edem3 other upstream 418149 2845709 ~ 2918231 (+)
alkal1 LOC108265007 other upstream 1104240 2216102 ~ 2232140 (+)
LOC113535242 glis1 other upstream 1348808 1877028 ~ 1987572 (+)
si:ch211-229n2.7 LOC108265723,LOC103028085,LOC108411637 other upstream 1529590 1803475 ~ 1806790 (+)
G125062 LOC108265639 other upstream 1989795 1344336 ~ 1346585 (+)
acsbg2 acsbg2,LOC107731199,LOC107676759,LOC107750933,LOC107695249 other downstream 97268 3445015 ~ 3537289 (+)
mknk2b mknk2,mknk2b,LOC107695256,LOC107585877,LOC107731184 other downstream 337146 3684893 ~ 3701703 (+)
wdr13 wdr13 other downstream 402757 3750504 ~ 3777490 (+)
si:ch73-233m11.2 LOC108265197 other downstream 747522 4095269 ~ 4104819 (+)
ssuh2rs1 LOC108264961 other downstream 872903 4220650 ~ 4278077 (+)

Expression


Co-expression Network