nr6a1a (nr6a1,LOC107563838,LOC107721088,LOC107678448,LOC107698081,LOC107753334)


Basic Information

Item Value
gene id nr6a1a
gene name nr6a1,LOC107563838,LOC107721088,LOC107678448,LOC107698081,LOC107753334
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 27405450 ~ 27490461 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU165106
aaaaaaaaaaaagaaagaaagaaagaaatgatgaaTGTGACTAGCAGCTATTTTAtacgtttaatttttttcccctctctctatTTATTACCAGACAGAGCTGAATGTATACTGATGTACACTGCACACAATCGCTGCTGCTCGTACGCAAAATGCACAAACTCCGCAGCAGAGTTTACGCTCGCTCGTCCGACTGCAGAATGTGTTCCCACTGCTAGGGTTAGGAGTTTTGAAATAGTTCACTTTTTGTTGCTCATAGAGACagatatacaaatatatatatatatatacctcaGGTAGAACCTTgatgagctctctctctctctctctctctctctctctctctctctctcgctcactttCTTTCTAACATCCGTCACACGCTACACACTCACAGTGTCAAAAGTCATCAgccaaaaatgaatttatttcactttttactTCCTCAAGTAAGGAAAGATTATAGCCTCCAAACCTAAatcataacatacacacacacacacatacacatacacacacatcacaaaaaaGGTTTATACCTTAACAGGTGCAGTCTGATGTCTGAAGCCAAACTTTTCACATCATCCGAGTCTGAAGAGGAAGAATGCGATTCGGCAAATCCGTTTTTCCCACAACAGCATATCTGATGCTAACACGGTGGCTATAGCTTTCCATTAGTCGTTAGCTAAATTAGCCTTTGTGTAGCTCCAAGGAATTTGGGAAACATGAGTGGAAAGTGGTGAGGAGAGGAGATAAATGTTCAATCACAGCCTGGGGGAAAGATTTGTACCTCACAGCTATATACATGTCTGTTGTTTTTGAGTTAGTTCGCTATTCTTCTCTCTGTAAGGTTGGCAGGGAGCGAGCAAACTGTTCAGCTGAGTGAATCTAAATAAAGAGGACCGCTTAGAGAAAGTGCACCAGCTTGTACCAACAGCGTTTACGTGTTACTCTGTCGTTTCACGTGTCCTCAACTGGCCCTGCTCTCCTTTTTTTCACACTGGacagattatttaaaaacagggTAAAAACAGGCTCTTTTTTTAGACGTCACTCAAGCTCAGATATCACAATGATGTAGGTTTCTAGTTGTAGTAAGGTTGTAGTGTGTAGtaggtggttgttgttgtttttgttttttttttaaatactttttattttctccaggAAAGAAAAGGGGTGTTGTTTTTTCGAAGGGCGTTTGTTCGATGATGTTAAATATCAAACTCCGAAGACCTGATGGTTAGCGGGAGCGGCGTCCTTGGGAACGTCGAGATGTTTTATTGCTAAGCCAAACAGTTGAAACATTCCAAAAATCGtcgagaggaaaaaaaaaaatcagaaaaagtcgaataatgtttacatatttttgCAGCAGACAATGACGAGCAGAGGGTCATAGCGAAGACGGGTGGCTCGGTGATGCCCGGCTCCCCGTCCTCCACCTCAAGGCCTCTCGAATGCAGCTAAATCTCAGTGGTAACGGAACTAAATAATCAGGGAGAAGCACGGATTAAAGGAGAAAAAGGACGTGCTGAGAGTAATGCGCCATTTAGTATTTAGACCAAATGTTACCACTTTATATACCTGCTTCTAAAGAGCAGTTTCATTCATCActtcagtcattttatttttgtctttttgttgttgGACCTTATTCCGTGTTTACTCTCGTAGCTATTATTgtggatggtttttttttttttggtgtttgtaTAGGGTGAAGGCCTATCACTTTTTCCAGCACTCAGTGTTGACGTCTCATTATCAGAGGTCATGCTgaacttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaatcgtTGCTCCTATGAGACTGGGCCGAGTAATACGTGAGAGACGGTACACTCGTTCAGCCCGGAAACATTTTTGACATCTTTGGAATAcaaccacacaaacactcacacgcgcgcacacacacacacacacacacacacacacacatcagcttttTGCTTTTAAGTGCTGTCGAACTCTCGAACACGTGTCTCAGAGGTCTATTCGATAAATTGCGCCTGGCAGCTGAGGTTGAGATGCAGGTCCACGAACCTCGTGAAGATTCTCTGAAgctcagggatttttttttttttattcagagatGATTCACTTCATTCAGACCCCTGTACTAAGACCCTTTGTAAGACCCTTTGTAACCTCTGCGTCTTTGTTGATTGATGTTATGTGTCTTGTAGGACTCAATAAGAGAGGCCATTCGCGATTTATTTAGAGCTTGGAAGTTCTCTATAAGCGACGGCTGCATTGTTTAGCGGCATTGAATTTCCCGTTGCAATAGGCCTTTCTCACAAAGCGCTCTCCTGAATGAAGCCTATGATTTTTACTGTgtgttaaactgttaaactgtTATCTGACCTctgaaacattttctttctgaagtttttcttttctatatatTTTGAATTGTCCTTAcaaattgtgtttgtttttttgtttgtacttttttttctccccccttTTGCAATTTCTGCATTGAAACTacctctttttttgtgtgtcatcATGTTGCGTActttcattaaagaaaaaaaaactatttattgGTTTCATAGCACCACTGGACCGTTTCTTTGTGTGTCTCTTATGCCGTTGTAACAGCATGCGTGTTTCGTCAGTAGTGTACTCCGGATCACTAGATGTTTCACTGCTCCGTTCTCTTCGTTCCATTTCCTCAGTGCAATGATGACATCGTCCTTTAAAATAACCAgtattatattttgttgttgtaaacactgtttttttttttttttttttgtgaa
>TU165107
ctcacacacacacacacacctttacacacacacacacacacacacacacacatcagcttttTGCTTTTAAGTGCTGTCGAACTCTCGAACACGTGTCTCAGAGGTCTATTCGATAAATTGCGCCTGGCAGCTGAGGTTGAGATGCAGGTCCACGAACCTCGTGAAGATTCTCTGAAgctcagggatttttttttttttattcagagatGATTCACTTCATTCAGACCCCTGTACTAAGACCCTTTGTAAGACCCTTTGTAACCTCTGCGTCTTTGTTGATTGATGTTATGTGTCTTGTAGGACTCAATAAGAGAGGCCATTCGCGATTTATTTAGAGCTTGGAAGTTCTCTATAAGCGACGGCTGCATTGTTTAGCGGCATTGAATTTCCCGTTGCAATAGGCCTTTCTCACAAAGCGCTCTCCTGAATGAAGCCTATGATTTTTACTGTgtgttaaactgttaaactgtTATCTGACCTctgaaacattttctttctgaagtttttcttttctatatatTTTGAATTGTCCTTAcaaattgtgtttgtttttttgtttgtacttttttttctccccccttTTGCAATTTCTGCATTGAAACTacctctttttttgtgtgtcatcATGTTGCGTActttcattaaagaaaaaaaaactatttattgGTTTCATAGCACCACTGGACCGTTTCTTTGTGTGTCTCTTATGCCGTTGTAACAGCATGCGTGTTTCGTCAGTAGTGTACTCCGGATCACTAGATGTTTCACTGCTCCGTTCTCTTCGTTCCATTTCCTCAGTGCAATGATGACATCGTCCTTTAAAATAACCAgtattatattttgttgttgtaaacactgtttttttttttttttttttgtgaa
>TU165108
acacacacacacacacacacacacacacacacacacatacatacacacacacacacacacacacacacacacacatacacatacacacacatcacaaaaaaGGTTTATACCTTAACAGGTGCAGTCTGATGTCTGAAGCCAAACTTTTCACATCATCCGAGTCTGAAGAGGAAGAATGCGATTCGGCAAATCCGTTTTTCCCACAACAGCATATCTGATGCTAACACGGTGGCTATAGCTTTCCATTAGTCGTTAGCTAAATTAGCCTTTGTGTAGCTCCAAGGAATTTGGGAAACATGAGTGGAAAGTGGTGAGGAGAGGAGATAAATGTTCAATCACAGCCTGGGGGAAAGATTTGTACCTCACAGCTATATACATGTCTGTTGTTTTTGAGTTAGTTCGCTATTCTTCTCTCTGTAAGGTTGGCAGGGAGCGAGCAAACTGTTCAGCTGAGTGAATCTAAATAAAGAGGACCGCTTAGAGAAAGTGCACCAGCTTGTACCAACAGCGTTTACGTGTTACTCTGTCGTTTCACGTGTCCTCAACTGGCCCTGCTCTCCTTTTTTTCACACTGGacagattatttaaaaacagggTAAAAACAGGCTCTTTTTTTAGACGTCACTCAAGCTCAGATATCACAATGATGTAGGTTTCTAGTTGTAGTAAGGTTGTAGTGTGTAGtaggtggttgttgttgtttttgttttttttttaaatactttttattttctccaggAAAGAAAAGGGGTGTTGTTTTTTCGAAGGGCGTTTGTTCGATGATGTTAAATATCAAACTCCGAAGACCTGATGGTTAGCGGGAGCGGCGTCCTTGGGAACGTCGAGATGTTTTATTGCTAAGCCAAACAGTTGAAACATTCCAAAAATCGtcgagaggaaaaaaaaaaatcagaaaaagtcgaataatgtttacatatttttgCAGCAGACAATGACGAGCAGAGGGTCATAGCGAAGACGGGTGGCTCGGTGATGCCCGGCTCCCCGTCCTCCACCTCAAGGCCTCTCGAATGCAGCTAAATCTCAGTGGTAACGGAACTAAATAATCAGGGAGAAGCACGGATTAAAGGAGAAAAAGGACGTGCTGAGAGTAATGCGCCATTTAGTATTTAGACCAAATGTTACCACTTTATATACCTGCTTCTAAAGAGCAGTTTCATTCATCActtcagtcattttatttttgtctttttgttgttgGACCTTATTCCGTGTTTACTCTCGTAGCTATTATTgtggatggtttttttttttttggtgtttgtaTAGGGTGAAGGCCTATCACTTTTTCCAGCACTCAGTGTTGACGTCTCATTATCAGAGGTCATGCTgaacttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaatcgtTGCTCCTATGAGACTGGGCCGAGTAATACGTGAGAGACGGTACACTCGTTCAGCCCGGAAACATTTTTGACATCTTTGGAATAcaaccacacaaacactcacacgcgcgcacacacacacacacacacacacacacacacatcagcttttTGCTTTTAAGTGCTGTCGAACTCTCGAACACGTGTCTCAGAGGTCTATTCGATAAATTGCGCCTGGCAGCTGAGGTTGAGATGCAGGTCCACGAACCTCGTGAAGATTCTCTGAAgctcagggatttttttttttttattcagagatGATTCACTTCATTCAGACCCCTGTACTAAGACCCTTTGTAAGACCCTTTGTAACCTCTGCGTCTTTGTTGATTGATGTTATGTGTCTTGTAGGACTCAATAAGAGAGGCCATTCGCGATTTATTTAGAGCTTGGAAGTTCTCTATAAGCGACGGCTGCATTGTTTAGCGGCATTGAATTTCCCGTTGCAATAGGCCTTTCTCACAAAGCGCTCTCCTGAATGAAGCCTATGATTTTTACTGTgtgttaaactgttaaactgtTATCTGACCTctgaaacattttctttctgaagtttttcttttctatatatTTTGAATTGTCCTTAcaaattgtgtttgtttttttgtttgtacttttttttctccccccttTTGCAATTTCTGCATTGAAACTacctctttttttgtgtgtcatcATGTTGCGTActttcattaaagaaaaaaaaactatttattgGTTTCATAGCACCACTGGACCGTTTCTTTGTGTGTCTCTTATGCCGTTGTAACAGCATGCGTGTTTCGTCAGTAGTGTACTCCGGATCACTAGATGTTTCACTGCTCCGTTCTCTTCGTTCCATTTCCTCAGTGCAATGATGACATCGTCCTTTAAAATAACCAgtattatattttgttgttgtaaacactgtttttttttttttttttttgtgaa
>TU165111
taaaaaaaaaaaccaaaaaaaaaaaaataaatggaggCAGATGAGGAGGTTCTGCACGTAGCTGCTGTCTCAGGGAATAGACGCGCTCCTTAAAACCACAAGCTACGAACATATACGGTCATCTTCAGGACATGGAACTTTCAACAAGCGACCATATTATATGGTCACAGTTTTCTTgaaaacactgttgctaggcaactagtAAAAACAGATGCCAAATATAAGCTAGCAAACTAAGCTAGCAATTTAACTACCAATGTAACGGTGAAAATTAGACACAGCTGtcaggaacatcaacatttcccGTGTTTACAGTCTTTACGAGAAAATTGGATTTgaagttttttagttttttttaaaacccgtCACccgttttttttaaaacccgcTTTGGAGGACAATAATGACTTTGTTAGCACTATagaaagttgttgtttttttttatttgatgattTAAGCCACttctaagaaagaaagagaagaccaaaaaaaattaaatatagaaaatgaagaaaagaacaCGAGAAAAAAAGCAtagaaaagcagaagaaaattttctattttaaattaaacagtgcCATGTATAGATGATTAAGTAGTAACTTTGTGAAGTTCAGCTTATTGACTACATACTGTAGGTTCTAACATACTGCAAAATATCAACTTTTTTTTCACGCTGTCCAAAAAATTTCTCGTAAACATTGTAACACTTGAAAGCAGCTATGTTTGGCTTTTCACGTTATTCGATGATTCACCCAATTGGTGTCTCTCTCAGGACGCAATCTGACACGTAATCACAGCAATAGCACGTATTTCACGCCTGTGTTTTAGGAGTGCTGTCTGAGGTGCTTTTCCTAAGCTACGTCTCAGACCTCTTTCATCTGCAACTCTTACTTTAACtacctgtgaaaaaaaaaatgtgacccATACGTGTTATGAAAGCATGTGTAGAATGTTT
>XM_034306583.1
CAGTTTATATCTAAGGCATCTTGTCGACCTGTGCGCGTGCGGCTTGTGACTGAAGTTTGATGTattagctttgttttttttttcgttttttttctgttttgtggcATGAAATGTAAATTTCCCAGGATTTTTCGAAAATAAAAGAAGAGACATGGTGGACAAAGTGAACGGAGTTGACTTCTCGGAGAGAAATTACAGCACGACGACCAATGGTTTCTATGGTGAGTTGCTGGAAGCAGATGAGCATGATGGGACAGtagatGACCAGGCTGAGCAGCGCTCCTGTCTCATCTGCGGAGACCGCGCCACCGGACTGCACTATGGCATTATTTCCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCAGCATCTGCAACAAGCGCGTGTACCGCTGCAGCCGTGACAAGAACTGCGAGATGTCACGCAAGCAGCGCAACCGCTGCCAGTACTGCCGCCTGCTCAAGTGTCTACAGATGGGCATGAACAGGAAAGCGATCAGAGAGGATGGCATGCCAGGCGGAAGGAACAAAAGCATCGGGCCTGTTCAgatcTCGGACGAGGAGATAGAGCGGATCATGTCTGGTCAGGAATTTAAGGATGAGGCCAACATGGCAGAGCACACCTGGGGCAACAATGGCGACAGCGATCACAGTTCCCCTGGCAACGGCGTCTCCGATGGCAACCAACCTTCTCCCGCATCCACACTCTCCTCCAATCGCTCGGTGGAGCTGAATGGCTACACGGCCGCTCTCAGGGAGCAGTACATCGGCAGCGCCGTTGCCCAGCACTACCAGTTCCTGCCTCACCTGTTCAGCTACGCAGCGCAGCCCCGCAGTCTGTACCCGCAGAGTCATACCCTCATCAGCCAGCTGGTGGCAGCAGAGGAACTGGCACCACTGGGCACTCCCATGCTCATCGAGGACGGGTACCGGGTGACCCAGGTGGAGCTCTTTGCCCTGCTGTGCCGCCTGGCCGATGAGCTGCTCTTCCGTCAGATCTCGTGGATTAAGAAGCTGCCGTTCTTCTGCGAGCTCTCCATCGAGGACTACACACGCCTGCTGAGCGCCACGTGGCAGGAGCTCATCCTGCTCGCCTGCCTGACCGTCTACAGCGCCCAGATCCTAGGAGACCTCGCCAACGTCACCGACAAGTACACACCGTCCGATCACGAGCTTCAGGGgtTTAGCGAGGATGGCATGGAGGTGATGGAGAAGCTGATCTATCTGTTCCGTAAGTTCCACCAGCTGAAGGTCAGCAATGAAGAGTACGCCTGCATGAAGGCCATCAACTTCCTGAACCAAGatatccGGGGTTTGACTAATGTAGCACAGTTGGAGCAGCTGAATAAGCGTTACTGGTACGTGTGTCAGGATTACACTGAGTACAAGTACCCTCACCAACCCAAACGCTTCCCGGAGATAATGATGTGTCTTCCTGAAATACGCTGCATCGCAGGGAAGTTGGTAAACGTTCCGTTGGAGCAGCTCCCCCTGCTGTTCAAGGCGGTCCTGCACTCCTGTAAGTCCAGCCTGAACACCTACAGGTCAAACTCCTCCCCCAGTGTGACGAAGGGCTCCGCCCCTGCCAACTAAAAGACCCGCCTCTCGTCTCCCAACGCAGCACATGGAGACAGGGAGTTTTGGGGTCATGGAGGTGTCGCTCAGATAGTTTCACCTccgtttcttaaaaaaaaaaaaaaaaaaaagaaaagaaagaaatgatgaaTGTGACTAGCAGCTATTTTAtacgtttaatttttttcccctctctctatTTATTACCAGACAGAGCTGAATGTATACTGATGTACACTGCACACAATCGCTGCTGCTCGTACGCAAAATGCACAAACTCCGCAGCAGAGTTTACGCTCGCTCGTCCGACTGCAGAATGTGTTCCCACTGCTAGGGTTAGGAGTTTTGAAATAGTTCACTTTTTGTTGCTCATAGAGACagatatacaaatatatatatatatatacctcaGGTAGAACCTTgatgagctctctctctctctctctctctctctctctctctctctctcgctcactttCTTTCTAACATCCGTCACACGCTACACACTCACAGTGTCAAAAGTCATCAgccaaaaatgaatttatttcactttttactTCCTCAAGTAAGGAAAGATTATAGCCTCCAAACCTAAatcataacatacacacacacacacatacacatacacacacatcacaaaaaaGGTTTATACCTTAACAGGTGCAGTCTGATGTCTGAAGCCAAACTTTTCACATCATCCGAGTCTGAAGAGGAAGAATGCGATTCGGCAAATCCGTTTTTCCCACAACAGCATATCTGATGCTAACACGGTGGCTATAGCTTTCCATTAGTCGTTAGCTAAATTAGCCTTTGTGTAGCTCCAAGGAATTTGGGAAACATGAGTGGAAAGTGGTGAGGAGAGGAGATAAATGTTCAATCACAGCCTGGGGGAAAGATTTGTACCTCACAGCTATATACATGTCTGTTGTTTTTGAGTTAGTTCGCTATTCTTCTCTCTGTAAGGTTGGCAGGGAGCGAGCAAACTGTTCAGCTGAGTGAATCTAAATAAAGAGGACCGCTTAGAGAAAGTGCACCAGCTTGTACCAACAGCGTTTACGTGTTACTCTGTCGTTTCACGTGTCCTCAACTGGCCCTGCTCTCCTTTTTTTCACACTGGacagattatttaaaaacagggTAAAAACAGGCTCTTTTTTTAGACGTCACTCAAGCTCAGATATCACAATGATGTAGGTTTCTAGTTGTAGTAAGGTTGTAGTGTGTAGtaggtggttgttgttgtttttgttttttttttaaatactttttattttctccaggAAAGAAAAGGGGTGTTGTTTTTTCGAAGGGCGTTTGTTCGATGATGTTAAATATCAAACTCCGAAGACCTGATGGTTAGCGGGAGCGGCGTCCTTGGGAACGTCGAGATGTTTTATTGCTAAGCCAAACAGTTGAAACATTCCAAAAATCGtcgagaggaaaaaaaaaaatcagaaaaagtcgaataatgtttacatatttttgCAGCAGACAA
>XM_034306584.1
ACAACGTCATTGGCCCTCTGGCCATGCCGTGACCCCTGGGGCCTGAACTCcgtggtcatgtgaccaagCCGAAAGTGACCAGCAGGCTCGACTGGGAGGAGGAGGATCAGAGCCAGAAGGagctgagaggagaggagaggacagcaggagagagaaaggcaagaagaaggacagagagggagagagagagagagagagagcgagagagagagagcgtcaTGAGGCCTAAGCCCTACCCGACGAGGATACACTTATGACTGAATGGCAGGAGAGACATGAGATGGATTCATGGGAAGtagatGACCAGGCTGAGCAGCGCTCCTGTCTCATCTGCGGAGACCGCGCCACCGGACTGCACTATGGCATTATTTCCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCAGCATCTGCAACAAGCGCGTGTACCGCTGCAGCCGTGACAAGAACTGCGAGATGTCACGCAAGCAGCGCAACCGCTGCCAGTACTGCCGCCTGCTCAAGTGTCTACAGATGGGCATGAACAGGAAAGCGATCAGAGAGGATGGCATGCCAGGCGGAAGGAACAAAAGCATCGGGCCTGTTCAgatcTCGGACGAGGAGATAGAGCGGATCATGTCTGGTCAGGAATTTAAGGATGAGGCCAACATGGCAGAGCACACCTGGGGCAACAATGGCGACAGCGATCACAGTTCCCCTGGCAACGGCGTCTCCGATGGCAACCAACCTTCTCCCGCATCCACACTCTCCTCCAATCGCTCGGTGGAGCTGAATGGCTACACGGCCGCTCTCAGGGAGCAGTACATCGGCAGCGCCGTTGCCCAGCACTACCAGTTCCTGCCTCACCTGTTCAGCTACGCAGCGCAGCCCCGCAGTCTGTACCCGCAGAGTCATACCCTCATCAGCCAGCTGGTGGCAGCAGAGGAACTGGCACCACTGGGCACTCCCATGCTCATCGAGGACGGGTACCGGGTGACCCAGGTGGAGCTCTTTGCCCTGCTGTGCCGCCTGGCCGATGAGCTGCTCTTCCGTCAGATCTCGTGGATTAAGAAGCTGCCGTTCTTCTGCGAGCTCTCCATCGAGGACTACACACGCCTGCTGAGCGCCACGTGGCAGGAGCTCATCCTGCTCGCCTGCCTGACCGTCTACAGCGCCCAGATCCTAGGAGACCTCGCCAACGTCACCGACAAGTACACACCGTCCGATCACGAGCTTCAGGGgtTTAGCGAGGATGGCATGGAGGTGATGGAGAAGCTGATCTATCTGTTCCGTAAGTTCCACCAGCTGAAGGTCAGCAATGAAGAGTACGCCTGCATGAAGGCCATCAACTTCCTGAACCAAGatatccGGGGTTTGACTAATGTAGCACAGTTGGAGCAGCTGAATAAGCGTTACTGGTACGTGTGTCAGGATTACACTGAGTACAAGTACCCTCACCAACCCAAACGCTTCCCGGAGATAATGATGTGTCTTCCTGAAATACGCTGCATCGCAGGGAAGTTGGTAAACGTTCCGTTGGAGCAGCTCCCCCTGCTGTTCAAGGCGGTCCTGCACTCCTGTAAGTCCAGCCTGAACACCTACAGGTCAAACTCCTCCCCCAGTGTGACGAAGGGCTCCGCCCCTGCCAACTAAAAGACCCGCCTCTCGTCTCCCAACGCAGCACATGGAGACAGGGAGTTTTGGGGTCATGGAGGTGTCGCTCAGATAGTTTCACCTccgtttcttaaaaaaaaaaaaaaaaaaaagaaaagaaagaaatgatgaaTGTGACTAGCAGCTATTTTAtacgtttaatttttttcccctctctctatTTATTACCAGACAGAGCTGAATGTATACTGATGTACACTGCACACAATCGCTGCTGCTCGTACGCAAAATGCACAAACTCCGCAGCAGAGTTTACGCTCGCTCGTCCGACTGCAGAATGTGTTCCCACTGCTAGGGTTAGGAGTTTTGAAATAGTTCACTTTTTGTTGCTCATAGAGACagatatacaaatatatatatatatatacctcaGGTAGAACCTTgatgagctctctctctctctctctctctctctctctctctctctctcgctcactttCTTTCTAACATCCGTCACACGCTACACACTCACAGTGTCAAAAGTCATCAgccaaaaatgaatttatttcactttttactTCCTCAAGTAAGGAAAGATTATAGCCTCCAAACCTAAatcataacatacacacacacacacatacacatacacacacatcacaaaaaaGGTTTATACCTTAACAGGTGCAGTCTGATGTCTGAAGCCAAACTTTTCACATCATCCGAGTCTGAAGAGGAAGAATGCGATTCGGCAAATCCGTTTTTCCCACAACAGCATATCTGATGCTAACACGGTGGCTATAGCTTTCCATTAGTCGTTAGCTAAATTAGCCTTTGTGTAGCTCCAAGGAATTTGGGAAACATGAGTGGAAAGTGGTGAGGAGAGGAGATAAATGTTCAATCACAGCCTGGGGGAAAGATTTGTACCTCACAGCTATATACATGTCTGTTGTTTTTGAGTTAGTTCGCTATTCTTCTCTCTGTAAGGTTGGCAGGGAGCGAGCAAACTGTTCAGCTGAGTGAATCTAAATAAAGAGGACCGCTTAGAGAAAGTGCACCAGCTTGTACCAACAGCGTTTACGTGTTACTCTGTCGTTTCACGTGTCCTCAACTGGCCCTGCTCTCCTTTTTTTCACACTGGacagattatttaaaaacagggTAAAAACAGGCTCTTTTTTTAGACGTCACTCAAGCTCAGATATCACAATGATGTAGGTTTCTAGTTGTAGTAAGGTTGTAGTGTGTAGtaggtggttgttgttgtttttgttttttttttaaatactttttattttctccaggAAAGAAAAGGGGTGTTGTTTTTTCGAAGGGCGTTTGTTCGATGATGTTAAATATCAAACTCCGAAGACCTGATGGTTAGCGGGAGCGGCGTCCTTGGGAACGTCGAGATGTTTTATTGCTAAGCCAAACAGTTGAAACATTCCAAAAATCGtcgagaggaaaaaaaaaaatcagaaaaagtcgaataatgtttacatatttttgCAGCAGACAA
>XM_034306585.1
CCCCACAACGTCATTGGCCCTCTGGCCATGCCGTGACCCCTGGGGCCTGAACTCcgtggtcatgtgaccaagCCGAAAGTGACCAGCAGGCTCGACTGGGAGGAGGAGGATCAGAGCCAGAAGGagctgagaggagaggagaggacagcaggagagagaaaggcaagaagaaggacagagagggagagagagagagagagagagcgagagagagagagcgtcaTGAGGCCTAAGCCCTACCCGACGAGGATACACTTATGACTGAATGGCAGGAGAGACATGAGATGGATTCATGGGAAGatGACCAGGCTGAGCAGCGCTCCTGTCTCATCTGCGGAGACCGCGCCACCGGACTGCACTATGGCATTATTTCCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCAGCATCTGCAACAAGCGCGTGTACCGCTGCAGCCGTGACAAGAACTGCGAGATGTCACGCAAGCAGCGCAACCGCTGCCAGTACTGCCGCCTGCTCAAGTGTCTACAGATGGGCATGAACAGGAAAGCGATCAGAGAGGATGGCATGCCAGGCGGAAGGAACAAAAGCATCGGGCCTGTTCAgatcTCGGACGAGGAGATAGAGCGGATCATGTCTGGTCAGGAATTTAAGGATGAGGCCAACATGGCAGAGCACACCTGGGGCAACAATGGCGACAGCGATCACAGTTCCCCTGGCAACGGCGTCTCCGATGGCAACCAACCTTCTCCCGCATCCACACTCTCCTCCAATCGCTCGGTGGAGCTGAATGGCTACACGGCCGCTCTCAGGGAGCAGTACATCGGCAGCGCCGTTGCCCAGCACTACCAGTTCCTGCCTCACCTGTTCAGCTACGCAGCGCAGCCCCGCAGTCTGTACCCGCAGAGTCATACCCTCATCAGCCAGCTGGTGGCAGCAGAGGAACTGGCACCACTGGGCACTCCCATGCTCATCGAGGACGGGTACCGGGTGACCCAGGTGGAGCTCTTTGCCCTGCTGTGCCGCCTGGCCGATGAGCTGCTCTTCCGTCAGATCTCGTGGATTAAGAAGCTGCCGTTCTTCTGCGAGCTCTCCATCGAGGACTACACACGCCTGCTGAGCGCCACGTGGCAGGAGCTCATCCTGCTCGCCTGCCTGACCGTCTACAGCGCCCAGATCCTAGGAGACCTCGCCAACGTCACCGACAAGTACACACCGTCCGATCACGAGCTTCAGGGgtTTAGCGAGGATGGCATGGAGGTGATGGAGAAGCTGATCTATCTGTTCCGTAAGTTCCACCAGCTGAAGGTCAGCAATGAAGAGTACGCCTGCATGAAGGCCATCAACTTCCTGAACCAAGatatccGGGGTTTGACTAATGTAGCACAGTTGGAGCAGCTGAATAAGCGTTACTGGTACGTGTGTCAGGATTACACTGAGTACAAGTACCCTCACCAACCCAAACGCTTCCCGGAGATAATGATGTGTCTTCCTGAAATACGCTGCATCGCAGGGAAGTTGGTAAACGTTCCGTTGGAGCAGCTCCCCCTGCTGTTCAAGGCGGTCCTGCACTCCTGTAAGTCCAGCCTGAACACCTACAGGTCAAACTCCTCCCCCAGTGTGACGAAGGGCTCCGCCCCTGCCAACTAAAAGACCCGCCTCTCGTCTCCCAACGCAGCACATGGAGACAGGGAGTTTTGGGGTCATGGAGGTGTCGCTCAGATAGTTTCACCTccgtttcttaaaaaaaaaaaaaaaaaaaagaaaagaaagaaatgatgaaTGTGACTAGCAGCTATTTTAtacgtttaatttttttcccctctctctatTTATTACCAGACAGAGCTGAATGTATACTGATGTACACTGCACACAATCGCTGCTGCTCGTACGCAAAATGCACAAACTCCGCAGCAGAGTTTACGCTCGCTCGTCCGACTGCAGAATGTGTTCCCACTGCTAGGGTTAGGAGTTTTGAAATAGTTCACTTTTTGTTGCTCATAGAGACagatatacaaatatatatatatatatacctcaGGTAGAACCTTgatgagctctctctctctctctctctctctctctctctctctctctcgctcactttCTTTCTAACATCCGTCACACGCTACACACTCACAGTGTCAAAAGTCATCAgccaaaaatgaatttatttcactttttactTCCTCAAGTAAGGAAAGATTATAGCCTCCAAACCTAAatcataacatacacacacacacacatacacatacacacacatcacaaaaaaGGTTTATACCTTAACAGGTGCAGTCTGATGTCTGAAGCCAAACTTTTCACATCATCCGAGTCTGAAGAGGAAGAATGCGATTCGGCAAATCCGTTTTTCCCACAACAGCATATCTGATGCTAACACGGTGGCTATAGCTTTCCATTAGTCGTTAGCTAAATTAGCCTTTGTGTAGCTCCAAGGAATTTGGGAAACATGAGTGGAAAGTGGTGAGGAGAGGAGATAAATGTTCAATCACAGCCTGGGGGAAAGATTTGTACCTCACAGCTATATACATGTCTGTTGTTTTTGAGTTAGTTCGCTATTCTTCTCTCTGTAAGGTTGGCAGGGAGCGAGCAAACTGTTCAGCTGAGTGAATCTAAATAAAGAGGACCGCTTAGAGAAAGTGCACCAGCTTGTACCAACAGCGTTTACGTGTTACTCTGTCGTTTCACGTGTCCTCAACTGGCCCTGCTCTCCTTTTTTTCACACTGGacagattatttaaaaacagggTAAAAACAGGCTCTTTTTTTAGACGTCACTCAAGCTCAGATATCACAATGATGTAGGTTTCTAGTTGTAGTAAGGTTGTAGTGTGTAGtaggtggttgttgttgtttttgttttttttttaaatactttttattttctccaggAAAGAAAAGGGGTGTTGTTTTTTCGAAGGGCGTTTGTTCGATGATGTTAAATATCAAACTCCGAAGACCTGATGGTTAGCGGGAGCGGCGTCCTTGGGAACGTCGAGATGTTTTATTGCTAAGCCAAACAGTTGAAACATTCCAAAAATCGtcgagaggaaaaaaaaaaatcagaaaaagtcgaataatgtttacatatttttgCAGCAGACAA

Function

symbol description
nr6a1 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in gamete generation and negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of chromatin and transcription regulator complex.

NR:

description
PREDICTED: nuclear receptor subfamily 6 group A member 1 isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0016477 cell migration biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0022008 neurogenesis biological_process
GO:0030917 midbrain-hindbrain boundary development biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0003707 steroid hormone receptor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08561 NR6A1, GCNF; germ cell nuclear factor

RNA

RNA id representative length rna type GC content exon number start site end site
TU165106 False 2819 lncRNA 0.40 2 27454461 27489246
TU165107 False 882 lncRNA 0.38 2 27467716 27489246
TU165108 False 2390 lncRNA 0.41 2 27428636 27489246
TU165111 False 958 lncRNA 0.35 2 27439761 27490461
XM_034306583.1 False 3071 mRNA 0.48 10 27405450 27487809
XM_034306584.1 False 3110 mRNA 0.49 9 27465278 27487809
XM_034306585.1 True 3111 mRNA 0.49 9 27465274 27487809

Neighbor

gene id symbol gene type direction distance location
tti2 tti2 coding upstream 35403 27363523 ~ 27370047 (+)
LOC113546107 slc18a1,LOC106527823,LOC107702874,LOC107591929 coding upstream 44588 27347381 ~ 27360862 (+)
ppiaa ppiaa,LOC108265559,LOC107691558,LOC107756846,LOC107722998,LOC107702873,LOC108411171,LOC107591938 coding upstream 67282 27333371 ~ 27338168 (+)
ogdha ogdha,LOC108411168,LOC108265558,LOC107756845,LOC107691557,LOC107566960 coding upstream 73902 27297892 ~ 27331548 (+)
ccdc92 ccdc92 coding upstream 304700 27079096 ~ 27100750 (+)
nr5a1a LOC108266031 coding downstream 20242 27510703 ~ 27530908 (+)
fgf17 fgf17,LOC107698084,LOC107678395,LOC103025711,LOC107721084,LOC106585328 coding downstream 91347 27581808 ~ 27588404 (+)
tubb2b tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding downstream 107953 27598414 ~ 27601456 (+)
fkbp15b LOC108265163 coding downstream 188454 27678915 ~ 27698868 (+)
ube2d4 ube2d4,UBE2D4,LOC101482088,LOC101172587,LOC108236573,LOC107393720 coding downstream 332076 27822537 ~ 27831378 (+)
G139756 NA non-coding upstream 63944 27338993 ~ 27341506 (+)
G139686 NA non-coding upstream 296572 27106929 ~ 27108878 (+)
G139647 NA non-coding upstream 506033 26878636 ~ 26899417 (+)
G139653 NA non-coding upstream 510920 26891077 ~ 26894530 (+)
G139551 NA non-coding upstream 885968 26512892 ~ 26519482 (+)
G139807 NA non-coding downstream 69929 27560390 ~ 27569085 (+)
LOC113546137 NA non-coding downstream 113456 27603917 ~ 27610560 (+)
G140170 NA non-coding downstream 120486 27610947 ~ 27611335 (+)
G140236 NA non-coding downstream 281983 27772444 ~ 27773644 (+)
G140237 NA non-coding downstream 284276 27774737 ~ 27851332 (+)
adam9 adam9,LOC107591921,LOC107722987,LOC107691559,LOC107566966,LOC107756844,LOC107702867 other upstream 110113 27267175 ~ 27295337 (+)
fam160b2 LOC108265858 other upstream 143709 27183021 ~ 27261741 (+)
rimbp2 rimbp2,LOC108414005 other upstream 675504 26626053 ~ 26729946 (+)
LOC117597788 NA other upstream 837518 26562820 ~ 26567932 (+)
car15 LOC108264895 other upstream 943129 26400191 ~ 26462321 (+)
dbnlb dbnl other downstream 347784 27838245 ~ 27859702 (+)
arpc5la arpc5la,LOC108265305,LOC108411248,LOC107571143,LOC107753090,LOC107550963,LOC107676626 other downstream 528723 28019184 ~ 28027450 (+)
slc7a4 slc7a4 other downstream 1258373 28748834 ~ 28803174 (+)
LOC117597881 LOC108265326 other downstream 1835473 29325934 ~ 29351762 (+)
LOC113546008 LOC108264940,LOC108412050 other downstream 2369727 29860188 ~ 29876280 (+)

Expression


Co-expression Network