Gene
RNA
| Item | Value |
|---|---|
| gene id | G141367 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 30189467 ~ 30202765 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU167107 | True | 354 | lncRNA | 0.47 | 2 | 30189467 | 30202765 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rnf34a | LOC108264913 | coding | upstream | 7913 | 30177482 ~ 30181554 (+) |
| LOC113546114 | NA | coding | upstream | 28929 | 30133936 ~ 30160538 (+) |
| lrrc75ba | lrrc75ba,LOC108264915,LOC108414797,LOC107753104 | coding | upstream | 57727 | 30110797 ~ 30131740 (+) |
| hnf1a | hnf1a,LOC108412048 | coding | upstream | 242861 | 29932966 ~ 29946606 (+) |
| LOC113546086 | NA | coding | upstream | 256506 | 29930249 ~ 29932961 (+) |
| orai1a | orai1,LOC108414442,LOC106585507 | coding | downstream | 3743 | 30206508 ~ 30213445 (+) |
| LOC113523739 | LOC108263642,LOC108270747,LOC108273691,LOC108270753,LOC108261292,LOC108274210,LOC108257668,LOC108261406,LOC108273546 | coding | downstream | 113063 | 30315828 ~ 30322195 (+) |
| selenop | LOC108264920,LOC108264932 | coding | downstream | 174848 | 30377613 ~ 30382370 (+) |
| G141366 | NA | non-coding | upstream | 17464 | 30171653 ~ 30172003 (+) |
| G141348 | NA | non-coding | upstream | 24476 | 30164393 ~ 30164991 (+) |
| G141328 | NA | non-coding | upstream | 90625 | 30043926 ~ 30098842 (+) |
| G141324 | NA | non-coding | upstream | 146074 | 30042842 ~ 30043393 (+) |
| G141236 | asphd2 | non-coding | upstream | 166548 | 29964767 ~ 30022919 (+) |
| G141375 | NA | non-coding | downstream | 11020 | 30213785 ~ 30214376 (+) |
| G141350 | NA | non-coding | downstream | 11721 | 30214486 ~ 30214821 (+) |
| G141349 | NA | non-coding | downstream | 12153 | 30214918 ~ 30215730 (+) |
| G141377 | NA | non-coding | downstream | 17956 | 30220721 ~ 30220947 (+) |
| G141454 | NA | non-coding | downstream | 80375 | 30283140 ~ 30283339 (+) |
| ggt5a | LOC108264907 | other | upstream | 148611 | 30028861 ~ 30040856 (+) |
| G141234 | hps4 | other | upstream | 260313 | 29910029 ~ 29929154 (+) |
| LOC113546064 | hps4 | other | upstream | 260397 | 29903513 ~ 29929070 (+) |
| LOC113546008 | LOC108264940,LOC108412050 | other | upstream | 313187 | 29860188 ~ 29876280 (+) |
| LOC117597881 | LOC108265326 | other | upstream | 837705 | 29325934 ~ 29351762 (+) |
