adora1b (adora1b,LOC108265083,LOC108414989,LOC103022582,LOC107711940,LOC107591868,LOC107680252,LOC107550463)


Basic Information

Item Value
gene id adora1b
gene name adora1b,LOC108265083,LOC108414989,LOC103022582,LOC107711940,LOC107591868,LOC107680252,LOC107550463
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 12775926 ~ 12783157 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026909634.2
cacacctcattttagCGCCTGAAGAAGCTTGGACCGGAAACGCTCGGGGCGCTGTAAAACACGCTGTGAAGGAAACAAGCAATATTTGCTGAAAACGGTATTTAAAAGTGTGCTGCTGGATAGCCAGGGCTCTCATCTGAGACGGCcctgaattaatttttttttgttcttcttcttcttcttttcttcattcCTCTCCTGTCCCGGCTCAGCACACGCCTCTCTGCGGGCTTTGCCTCGAGAGCGTTTGTGACTTTGCACAGCGAGAAAGGGGCGTCGCGTGCGTTCATGCGGTTTAATTCTAAGAAATAACGGcaataaaatcacacaaaagaAACACAGGCTGATCGGGACGCTGCGTACGCGGAGGCTTCTGAGGACTCGCAGTCACATTCAGAGAAGCGCCAGGACAACAGTGCTTACATGGACGGATTGCGTTTCGGCTTTCCAGAGCAGGAATGAAGCTCTCTCTCATCCCATTTTTGATGTCTTGGATGGTGGGAGGACTGTACAACGAATGCAGGTGACAAATGAACGCAGAACCTAACTGTTTTCCCCGGACAAAGACATGCAAGCAGCAGGACATGTGCACAAAGCGCAGGTGGATCTGATGAACAGATGCGTTTGGGTTATGCGAATATGGTTCCACGATcggacatttttattttacgaAAACGAATAAAAGCACACATTCTGTGATGCATTTCATTCTATATTATTTCTGCATGTATTGCTGTGTTTATAAAAAGCATGCTTGGTGTGCCAGAATAGCCCCAAGTACTCCAAGCATTCTGATAGGAGGAATTTTATGGACTGCAGCCAGACAATTGAACATCACTTCCTTCTGAAAGCCGATATCCCCGCcaaactttaatttattatactGGCCTTTTATTCCTTGCACTCCACACGACCATGCCAGACGACCACTACGCAGCTCAAGCCCTCTACATAGGCATGGAGGTGCTGATCGCCGTGTCCTCGGTGATCGGAAACGTGATGGTGATTTGGGCGGTTAAAATAAACCGGTCACTGAGAGACACAACTTTCTGGTTCATTGTATCTCTGGCTGTGGCCGACATCGCGGTGGGAGCTCTCGTCATCCCGCTCGCCATCACCATCAGTATCGGACTCCAGACTCACTTCTACAGCTGTTTGCTGGTGGCGTGCACAGTGCTGGTGCTCACTCAGAGCTCCATCCTCGCCCTGCTCGCCATCGCCATTGACCGATACCTCAGAGTAAAGATCCCGACCAGTTACAAACGAGTGGTCACTCCAAGACGAGTGGGATTAGCGGTGGTCGCATGCTGGGCAGTAGCCTTCATAGTTGGCATGACTCCTATGCTCGGCTGGAACAAGTTACACAACCTCGAGCAACAAAATGGCTCACTCAGCAGTGACCTGATCATCACCTGCCAGTTTGAGAACGTCATCAGTATGGAATACATGGTTTACTTCAATTTTTTCGGCTGGGTGCTGCCACCGCTGCTCCTTATGCTTGGCATCTACACGGAGATCTTCTACATGATTCACAAGCAGTTGAACAAGAAGGTGAGCACAAGCCACACTGACCCAAACAAGTACTACGATAAAGAATTGAAGCTGGCAAAGTCACTCGCCCTTGTCCTGTTCCTGTTTGCTGTCAGTTGGCTCCCGCTTCATATTCTGAACTGCATCACACTCTTCTGCCCTAAGTGTGAGAAACCCATATTGCTCCTCTATATCGCCATCTTACTTACTCATGGCAACTCAGCAGTGAACCCTATTGTCTATGCTTTCCGCATTAAAAAGTTTCGCACCGCGTTCCAAAGGATCTGGAAGCAGTATTTCTGCTGTAAGGAGGCTTCTCCCATTGAAATGCAAATGAGTGAACGACTGGATAAGGATAATTACAGCCACGCTCCTCAGACTGCGTTTCACGTGGATCACAATAACATTTAACTGGAAGACCATGGACCTACTGAGCAGGCTGGCATTCTGCCacatatgaatataatatgaatgtaaatcatatgctgaCTGCAGCTGTCAGAATGTGCCCCCATTCTGCAAATCAGTCAGTTAAACATTATTGTTCCACTGGCATGGACAAAGGGAAGGGAAATTTAGATCATGAAGAAGGGGAGTACGATGTGTTGTACACGaaatcaaaaatgttttatacttgtaaaaatgtttactgGGTGATAAAATGTATGTAGAGTCAAACCACAGGGGAAGTATcagacaagttaaaaaaaaaaatccacactggtttatttgcactattgtgcTATCCAAAA

Function

symbol description
adora1b Predicted to enable G protein-coupled adenosine receptor activity. Predicted to act upstream of or within G protein-coupled adenosine receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain. Human ortholog(s) of this gene implicated in asthma. Orthologous to human ADORA1 (adenosine A1 receptor).

NR:

description
PREDICTED: adenosine receptor A1-like

GO:

id name namespace
GO:0001973 G protein-coupled adenosine receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001609 G protein-coupled adenosine receptor activity molecular_function

KEGG:

id description
K04265 ADORA1; adenosine receptor A1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026909634.2 True 2282 mRNA 0.47 2 12775926 12783157

Neighbor

gene id symbol gene type direction distance location
LOC113531715 LOC108265567,LOC108414659 coding upstream 113781 12659028 ~ 12662145 (+)
LOC113531099 pepa,LOC108442134,LOC108265564,LOC108414658 coding upstream 121243 12651225 ~ 12654683 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 coding upstream 126819 12646689 ~ 12649107 (+)
alx3 alx3 coding upstream 178487 12586799 ~ 12597439 (+)
kcnc4 kcnc4,LOC107731196 coding upstream 266260 12478618 ~ 12509666 (+)
dclre1b dclre1b coding downstream 9059 12792216 ~ 12798367 (+)
lhfpl5b lhfpl5,LOC107591869,LOC107745833,LOC102777996 coding downstream 133281 12916438 ~ 12921186 (+)
c8h1orf194 c5h1orf194 coding downstream 194870 12978027 ~ 12979366 (+)
inavaa LOC108264883 coding downstream 202270 12985427 ~ 12994779 (+)
LOC113534124 NA coding downstream 272293 13055450 ~ 13061438 (+)
G131605 NA non-coding upstream 46404 12712625 ~ 12729522 (+)
G131606 NA non-coding upstream 63441 12690167 ~ 12712485 (+)
LOC117597872 NA non-coding upstream 74425 12700712 ~ 12701501 (+)
LOC117597859 NA non-coding upstream 242668 12519894 ~ 12533258 (+)
G131282 NA non-coding upstream 549564 12226152 ~ 12226362 (+)
LOC117597782 NA non-coding downstream 25966 12809123 ~ 12809738 (+)
LOC117597771 p38a,LOC104939458,LOC100692416,LOC108442382 non-coding downstream 154147 12937304 ~ 12941456 (+)
G131721 NA non-coding downstream 220238 13003395 ~ 13006090 (+)
G131715 LOC108265908,LOC108442391 non-coding downstream 239059 13022216 ~ 13023846 (+)
G131930 NA non-coding downstream 490978 13274135 ~ 13275095 (+)
rbm15 rbm15,LOC107731203 other upstream 171221 12599698 ~ 12604705 (+)
kcnq2a LOC108265949,LOC108442249,LOC107668096,LOC107550457,LOC107711924,LOC107731192,LOC107679259 other upstream 545925 12196593 ~ 12230001 (+)
foxp3a LOC108265789 other upstream 780074 11979186 ~ 11995852 (+)
porcn porcn,LOC108265120,LOC108441640,LOC107668076,LOC107585894,LOC107745789 other upstream 1061894 11705547 ~ 11714032 (+)
uck2a uck2,uck2a,LOC108441637,LOC107731246,LOC107668082,LOC107745792,LOC107585889,LOC106584056,LOC107549113,LOC107695269 other upstream 1079135 11677511 ~ 11696791 (+)
LOC113527348 LOC108266008,LOC108437580,LOC107731173,LOC107549994,LOC107745767 other downstream 922009 13705166 ~ 13791317 (+)
dock8 dock8 other downstream 1107247 13890404 ~ 13948808 (+)
aopep c5h9orf3,cunh9orf3 other downstream 1166780 13949937 ~ 14022687 (+)
G132595 atoh1 other downstream 1539015 14322172 ~ 14323450 (+)
commd10 commd10 other downstream 2157144 14940301 ~ 14982884 (+)

Expression


Co-expression Network