ajap1 (ajap1)


Basic Information

Item Value
gene id ajap1
gene name ajap1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 8483083 ~ 8541426 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912711.2
gagaggagacaggggaaagagagagagagagagagcagagagagaaagcgagagaggagagaaagagaggagaacgCGAGCAGAGCGCGCTCGGGCTGTTACCACTGCGCAATTGCGCACACGTTAAGCGCTGTGTTTTCCCCTCAGCGCGCCTGAAGTGGCGCTCATCTCCCGCCGCCCCTCGCCTTCTCCACCGCGTCACATCACTCCTTCCAGCCGCCTCCGCAAACACCGCTCAACTTCATCGACTACTATGAGCCCCAGCTGACGCGACGACTCGCTCGGACCCTGCGCCGCGGAcggctgtttgttttttttcccttttctggGCTCAATGCCGTCTCGCGCCTGATCTCGAGCCTCCCGTTAATGACAGACGAGCGCGCGGTCATAATAAAGTGCGCGGTCATTATGTGCGGCACTTGGCGTTTTCACTCTGTATCCAGCATGACGCTTCTACTGCTTCCTGACTTTTCTTTAGCACTGGAGTGTATAGCCATGTTTCATAAACTTCGGGCTGAAGAAGACAGCTTTTGAGCACCGTCTGAGGCGCGAGCCCGCGTCGCTGCGCGCATCCTCAGTTAGTGAAgaaaataaggggaaaaaaatcaaaagcgagcttgttttttttttttttggcgctTCCGGAGATCTGGAGCTAGCTGATGCTGCTTGGCTGAAGATGTTAGCCTTAATGACATCTGGCCGGAGATTCCTAACTTGAAGGTGTCACAAGAGCGAGCGTCGACATTTGAGGAGTGCACTGTAAATGGGAGCTGAGCTGCTTCTGGATCGCTCTCGTGAACTATGTGGATAAAGTGGTGTAGAGAACGCAgTTTCATGGCTGCATTGAGACCATTGGGACTCCTGGGATGCAGAATGTGGGTCCTCTTCACCCTTGTCCACCTCACTATGGATCTCTCCATGTGTGCTCCAGTGGGGACTGGGCTTAGGCTGCTCCCTCGGTCACTGCCTCGCTTACGCCCTCGTCTTCTCATCCGGGATGTACCCAGTGGTCCGCACTGGAGGACTCTGGGTACCTGGCAGCGTGGTGTACCATTACTCGACCACCATTATCCTGTACCATTACTCGACCaccgaggaggaggaggaagagaggggTTGGGGTTCAAACCACGGCCACAGAGGCACAAACGTCATCTTTGTGAGAACTGCACCTCCAGCTTCCCTGCCTCAGAGGGAGGCGAATCGCTGGAGTTTTTGGAGGGGAGTAAAGCCGACATTGTGCAGCACTTGTTGCGACAACGTAGGCAGTTGAAGTGGGATAGTTATGACAGTTATTCGCAGGAAGGAAGGACCACTACAGTGGCAGGATTTATTGACTGGGGGCCAACTGGGACAGATGATGGGGCAGAGGATGAGGTGAAAGTTATCCCCAAGACCACGGCCACTACAAaggccaccaccaccactacgaCCACCACGACAACTACCACGACCACACGCAGCCCTCAAAGGACTCATGCGGTGGTCACCACCACCCGTCCAAGGAGGCTGAGTACCACACAGCCTGCTGTTAATCTCGGCGTGACCGCCAAGCCACAGAAGCCATTTGGAGATACACCAGGTTTGGCAGTGCATCAGATCATCACTATCACTGTTTCCCTCATCATGGTCGTCGCAGCCTTGATAACAACACTAGTCCTTAAAAACTGCTGTGCACAGTCGGGGAATGGCCGCCACACTAGCCACCAGAGGAAGATCAACCAGCAGGAAGAGAGCTGCCAGAACCTGACTGACTTCACGCCGGCACGCGTGCCCAGCAAGGTGGACATCTTCACCGCCTACAACGACAGTTTACAGTGCTCTCACGAGTGTGTGCGCACCGCTGTGCCAGTCTACACAGACGAGATGATCCAACACACACCGATTTACAAGACCACTTACAATGGGAGCAGACCGTCCCCAACTGAAAGGCAGCTAATCcctgtggcctttgtgtctgagAAATGGTTCGAGATCTCCTGCTGAGGGCCTTTTACTACCAGTGGGTAACTGCAGCTTCCTCAATTATGGACCCTGAATCCCATTGGAACACCTTGAATtctcaaataaagaaaatttaaaaaaatacaaaccaataaagaaacaaaagccCATGTATTACAGAAAGAAGAATCAGAAGGTACACACAGTTTTTTACAAACAATGGATTTCCTGGACATGGAGcgaagatgtttatttttctaagCTGATCACAGATGAGATGTTCTATGGTTCCCACTCCAGATTATTTTCCATATAGACTTCCAGTCATTTAGAAATGATACAATATACTTAATGCTAATATATGATATACATAAATTACTGTATGTGTAGAAGTACTGGAGGAAGATCACCGCCACAGACGTGTTGGAATGCTGTTTCCTGATGGGCTGCTTTCTGTGAAAAGGGTGAACAGACTTTTCAGAACTACGTGCCAATAACGCCAATATGTGCCAATATGTACAGATGGGACGCGTCTGGGAGTTTATCGAAAACTACAGACACAAAGACGAGTCATTTCTGTGACAGTTATTCTATATCAACCCATCATTTTTTGTATAGaaagtataaatatgtatttgaaCTATGTTTTGAAATAGTTGAACAAAATGTGTTGCAGACgtccaaaaatatttataaggATCACTATTTGATTTTGATTaggtaaaagaaaagaaacgaCGAGAACCTTGGCTGACTTTTGAGTTTAATGTATTGTTATTAGGCCCTGTTTTAAATAGAATAGTCTTCTCTatttttgtacacacacacactcacacacacacactcacactcacacacacatcacattactCAGTTGTGGTGCATCAACTCTTGGAACTGTTAATATGATAATCAGTCAGGGCGGAAGAGACATTTTTAAGACCCTCGTCGTTATTATTGATGATTCAGAAATCATCGTTCCTGATGATTGCTCATCCATAGAAGCCATTTTATTTGCTACGGGGTGCCATTACTTATAAATGACAGTTGATATGTTGGGTGGCTATGGTCACGGTTTGTGTATTATATCTGTACTGTCAAAGAGCCTTAGTCATGAGTTGGTCTAATTTTTCCGTAATGGTACGCAATACATTTTCATGGTTTGTGCATCAGAATTtaaagactccttttttttttttttttttaaaaacagtgtacaGTTATCGGTATTCTAGGGCTTATTATcaaacacatcacatttttGTGCCAAGTCATTGTTGAGTGCCAAGTCCAAGTCATTTgaatcatttaaacacacattcataacatttatattatttattagtgtgtTTCAGAAAGTAAGATGTATGTACCAAATGCAGAAATGTCACCTGGTGTGATGCTGAagtggatttttatttaaaactgtatgGATAATTCATTTATACAGAGAGCTGTTaaggttttatttcattttgtgcttctTCTCAAACCTTTTTCTGGTtgaaaaatggtaaataaaattaatttattatccAACCAGTGGAAAAGATAGAAATGACCCATGATAACACTTGAAATGTGAAGGTAGCtgagtgtgtgcctgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgcttctATGTCTGTGTGATGTTCATTTCACAAATCACTGCAAAAGATTACAATGAGATGGCCAAAGAGTTATAAATGATGGCAGGTATTCATTTGGGtaattttgctgaaaaaaaaaaaaaaatcagaacacaAATCCTACCTAGAAATCATTATTTGACTAGACAGAAGAATAACACAGGATATAGTTCATATCAATATaatagaattaaattaaattgtgcTATGAAATGCTTTACTGGTTCTACAAATATAGATGTCCATGTGGAAAAGCAAACAGTTGTTTGCAAAAGCATGTAGTTATAAATCCATCACACTGAAAAACTTCGGAAAAAAGAACATAATGATAGCTTTATGCTCTTCCATTTCCATTCCAAGTCACATATCCCACATATTTACCTCAAATATGTGGGTATTGATAATCAAAGGAATTTTACTCCATTAATCTTATGTTTTTTAGGGCCTGGATGCACTGAGCAAAAATGAAGTCAATCCCTTGTGGGTCTCATCAGAACGTTAAAATGCTATATGATGTATTTCATAGTTGCATAATGGACAAGTAGGTTGAAGGACCAGAGAAACTAaacttttttgttaaataacatcaagagaaaataaataccCTAGATAGACTCAAATGATATTTTTAGTTGTGAGCACCACATGTCATAGCCGACGACTTGGTGACTTCTTGTCGAGGTCGCAAACACAGTGTgctgcaaaaacatttttatcagCAGGTTTATCAGGCCACACAGTCATCTCCTCACTGGGAATTCATATACTCGTTCATTTCGCTTAATTGTGTTAATGCACAATTAGCTAGCAATCAGTTAGTTAGTTAACTAGCTGGTCATACTTTATTACATTGCATTAAGTACCATTTTTAGCCTAGACAGTTAGGTTTCTGGGAAAGCAACACATAGTACTGGAGAACATTCTGGAGTTTTTAACTAAAGTTTTAACAGTGGGCTAGCTAATTTATCAGTTGTCCACCactgtacacacatatactcaccaaccactttattaggatcaCCTTTACACCGGGTCTTTCGTGCAATCttttggcagcagtgcaatgcatacaatcatgcaaGTACAGGTCAACAGCTTCTGTTCatcttcacatcaaacaacaaaatgagaaaaaatatgatctcgCTTTGACTGTGGACCAGACGgactgagtatttcagaaaaattCCTGGGATTTGTACGCACAACTGTCTCTAGAGTTAAAAATaaaggtgtgaaaaacaaaaaccatctcctgtgcagcagttctgcaggtggaaacgcATTTTTGATGGGATTTTGAGTTctgaggagaatgaccagacggGTTCAAGGTGACAGGATGGCTACtgtaactgaaataaccactctttacaaccgtgatgagctgaaaagcatctcagaatgcacaacacgtcaaatct
>XM_034306375.1
gagaggagacaggggaaagagagagagagagagagcagagagagaaagcgagagaggagagaaagagaggagaacgCGAGCAGAGCGCGCTCGGGCTGTTACCACTGCGCAATTGCGCACACGTTAAGCGCTGTGTTTTCCCCTCAGCGCGCCTGAAGTGGCGCTCATCTCCCGCCGCCCCTCGCCTTCTCCACCGCGTCACATCACTCCTTCCAGCCGCCTCCGCAAACACCGCTCAACTTCATCGACTACTATGAGCCCCAGCTGACGCGACGACTCGCTCGGACCCTGCGCCGCGGAcggctgtttgttttttttcccttttctggGCTCAATGCCGTCTCGCGCCTGATCTCGAGCCTCCCGTTAATGACAGACGAGCGCGCGGTCATAATAAAGTGCGCGGTCATTATGTGCGGCACTTGGCGTTTTCACTCTGTATCCAGCATGACGCTTCTACTGCTTCCTGACTTTTCTTTAGCACTGGAGTGTATAGCCATGTTTCATAAACTTCGGGCTGAAGAAGACAGCTTTTGAGCACCGTCTGAGGCGCGAGCCCGCGTCGCTGCGCGCATCCTCAGTTAGTGAAgaaaataaggggaaaaaaatcaaaagcgagcttgttttttttttttttggcgctTCCGGAGATCTGGAGCTAGCTGATGCTGCTTGGCTGAAGATGTTAGCCTTAATGACATCTGGCCGGAGATTCCTAACTTGAAGGTGTCACAAGAGCGAGCGTCGACATTTGAGGAGTGCACTGTAAATGGGAGCTGAGCTGCTTCTGGATCGCTCTCGTGAACTATGTGGATAAAGTGGTGTAGAGAACGCAgTTTCATGGCTGCATTGAGACCATTGGGACTCCTGGGATGCAGAATGTGGGTCCTCTTCACCCTTGTCCACCTCACTATGGATCTCTCCATGTGTGCTCCAGTGGGGACTGGGCTTAGGCTGCTCCCTCGGTCACTGCCTCGCTTACGCCCTCGTCTTCTCATCCGGGATGTACCCAGTGGTCCGCACTGGAGGACTCTGGGTACCTGGCAGCGTGGTGTACCATTACTCGACCACCATTATCCTGTACCATTACTCGACCaccgaggaggaggaggaagagaggggTTGGGGTTCAAACCACGGCCACAGAGGCACAAACGTCATCTTTGTGAGAACTGCACCTCCAGCTTCCCTGCCTCAGAGGGAGGCGAATCGCTGGAGTTTTTGGAGGGGAGTAAAGCCGACATTGTGCAGCACTTGTTGCGACAACGTAGGCAGTTGAAGTGGGATAGTTATGACAGTTATTCGCAGGAAGGAAGGACCACTACAGTGGCAGGATTTATTGACTGGGGGCCAACTGGGACAGATGATGGGGCAGAGGATGAGGTGAAAGTTATCCCCAAGACCACGGCCACTACAAaggccaccaccaccactacgaCCACCACGACAACTACCACGACCACACGCAGCCCTCAAAGGACTCATGCGGTGGTCACCACCACCCGTCCAAGGAGGCTGAGTACCACACAGCCTGCTGTTAATCTCGGCGTGACCGCCAAGCCACAGAAGCCATTTGGAGATACACCAGGTTTGGCAGTGCATCAGATCATCACTATCACTGTTTCCCTCATCATGGTCGTCGCAGCCTTGATAACAACACTAGTCCTTAAAAACTGCTGTGCACAGTCGGGGAATGGCCGCCACACTAGCCACCAGAGGAAGATCAACCAGCAGGAAGAGAGCTGCCAGAACCTGACTGACTTCACGCCGGCACGCGTGCCCAGCAAGGTGGACATCTTCACCGCCTACAACGACAGTTTACAGTGCTCTCACGAGTGTGTGCGCACCGCTGTGCCAGTCTACACAGACGAGATGATCCAACACACACCGATTTACAAGACCACTTACAATGGGAGCAGACCGTCCCCAACTGAAAGGCAGCTAATCcctgtggcctttgtgtctgagAAATGGTTCGAGATCTCCTGCTGAGGGCCTTTTACTACCAGTGGGTAACTGCAGCTTCCTCAATTATGGACCCTGAATCCCATTGGAACACCTTGAATtctcaaataaagaaaatttaaaaaaatacaaaccaataaagaaacaaaagccCATGTATTACAGAAAGAAGAATCAGAAGAAGTACTGGAGGAAGATCACCGCCACAGACGTGTTGGAATGCTGTTTCCTGATGGGCTGCTTTCTGTGAAAAGGGTGAACAGACTTTTCAGAACTACGTGCCAATAACGCCAATATGTGCCAATATGTACAGATGGGACGCGTCTGGGAGTTTATCGAAAACTACAGACACAAAGACGAGTCATTTCTGTGACAGTTATTCTATATCAACCCATCATTTTTTGTATAGaaagtataaatatgtatttgaaCTATGTTTTGAAATAGTTGAACAAAATGTGTTGCAGACgtccaaaaatatttataaggATCACTATTTGATTTTGATTaggtaaaagaaaagaaacgaCGAGAACCTTGGCTGACTTTTGAGTTTAATGTATTGTTATTAGGCCCTGTTTTAAATAGAATAGTCTTCTCTatttttgtacacacacacactcacacacacacactcacactcacacacacatcacattactCAGTTGTGGTGCATCAACTCTTGGAACTGTTAATATGATAATCAGTCAGGGCGGAAGAGACATTTTTAAGACCCTCGTCGTTATTATTGATGATTCAGAAATCATCGTTCCTGATGATTGCTCATCCATAGAAGCCATTTTATTTGCTACGGGGTGCCATTACTTATAAATGACAGTTGATATGTTGGGTGGCTATGGTCACGGTTTGTGTATTATATCTGTACTGTCAAAGAGCCTTAGTCATGAGTTGGTCTAATTTTTCCGTAATGGTACGCAATACATTTTCATGGTTTGTGCATCAGAATTtaaagactccttttttttttttttttttaaaaacagtgtacaGTTATCGGTATTCTAGGGCTTATTATcaaacacatcacatttttGTGCCAAGTCATTGTTGAGTGCCAAGTCCAAGTCATTTgaatcatttaaacacacattcataacatttatattatttattagtgtgtTTCAGAAAGTAAGATGTATGTACCAAATGCAGAAATGTCACCTGGTGTGATGCTGAagtggatttttatttaaaactgtatgGATAATTCATTTATACAGAGAGCTGTTaaggttttatttcattttgtgcttctTCTCAAACCTTTTTCTGGTtgaaaaatggtaaataaaattaatttattatccAACCAGTGGAAAAGATAGAAATGACCCATGATAACACTTGAAATGTGAAGGTAGCtgagtgtgtgcctgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgcttctATGTCTGTGTGATGTTCATTTCACAAATCACTGCAAAAGATTACAATGAGATGGCCAAAGAGTTATAAATGATGGCAGGTATTCATTTGGGtaattttgctgaaaaaaaaaaaaaaatcagaacacaAATCCTACCTAGAAATCATTATTTGACTAGACAGAAGAATAACACAGGATATAGTTCATATCAATATaatagaattaaattaaattgtgcTATGAAATGCTTTACTGGTTCTACAAATATAGATGTCCATGTGGAAAAGCAAACAGTTGTTTGCAAAAGCATGTAGTTATAAATCCATCACACTGAAAAACTTCGGAAAAAAGAACATAATGATAGCTTTATGCTCTTCCATTTCCATTCCAAGTCACATATCCCACATATTTACCTCAAATATGTGGGTATTGATAATCAAAGGAATTTTACTCCATTAATCTTATGTTTTTTAGGGCCTGGATGCACTGAGCAAAAATGAAGTCAATCCCTTGTGGGTCTCATCAGAACGTTAAAATGCTATATGATGTATTTCATAGTTGCATAATGGACAAGTAGGTTGAAGGACCAGAGAAACTAaacttttttgttaaataacatcaagagaaaataaataccCTAGATAGACTCAAATGATATTTTTAGTTGTGAGCACCACATGTCATAGCCGACGACTTGGTGACTTCTTGTCGAGGTCGCAAACACAGTGTgctgcaaaaacatttttatcagCAGGTTTATCAGGCCACACAGTCATCTCCTCACTGGGAATTCATATACTCGTTCATTTCGCTTAATTGTGTTAATGCACAATTAGCTAGCAATCAGTTAGTTAGTTAACTAGCTGGTCATACTTTATTACATTGCATTAAGTACCATTTTTAGCCTAGACAGTTAGGTTTCTGGGAAAGCAACACATAGTACTGGAGAACATTCTGGAGTTTTTAACTAAAGTTTTAACAGTGGGCTAGCTAATTTATCAGTTGTCCACCactgtacacacatatactcaccaaccactttattaggatcaCCTTTACACCGGGTCTTTCGTGCAATCttttggcagcagtgcaatgcatacaatcatgcaaGTACAGGTCAACAGCTTCTGTTCatcttcacatcaaacaacaaaatgagaaaaaatatgatctcgCTTTGACTGTGGACCAGACGgactgagtatttcagaaaaattCCTGGGATTTGTACGCACAACTGTCTCTAGAGTTAAAAATaaaggtgtgaaaaacaaaaaccatctcctgtgcagcagttctgcaggtggaaacgcATTTTTGATGGGATTTTGAGTTctgaggagaatgaccagacggGTTCAAGGTGACAGGATGGCTACtgtaactgaaataaccactctttacaaccgtgatgagctgaaaagcatctcagaatgcacaacacgtcaaatct

Function

symbol description
ajap1 Predicted to enable beta-catenin binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction; cell-cell contact zone; and cytoplasmic side of plasma membrane. Predicted to be spanning component of plasma membrane. Orthologous to human AJAP1 (adherens junctions associated protein 1).

NR:

description
PREDICTED: adherens junction-associated protein 1

GO: NA

KEGG:

id description
K21387 AJAP1; adherens junction-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912711.2 True 5036 mRNA 0.43 6 8483083 8541426
XM_034306375.1 False 4842 mRNA 0.44 7 8483083 8541426

Neighbor

gene id symbol gene type direction distance location
LOC113534163 LOC108265188,LOC108425021,LOC106518891 coding upstream 80536 8394989 ~ 8402547 (+)
si:dkey-72l14.3 LOC108265127,LOC107717507 coding upstream 181410 8299355 ~ 8301673 (+)
LOC113528372 fsbp coding upstream 360197 8117577 ~ 8122886 (+)
si:dkey-20d21.12 NA coding upstream 523866 7954723 ~ 7959217 (+)
c8h1orf174 c5h1orf174 coding upstream 561342 7916766 ~ 7921741 (+)
LOC113533404 NA coding downstream 360822 8902248 ~ 8915811 (+)
sema3b sema3b,LOC107717529,LOC107556489,LOC107669651 coding downstream 408788 8950214 ~ 9002824 (+)
pym1 pym1,LOC102777374 coding downstream 624552 9165978 ~ 9169576 (+)
LOC113526950 LOC108266051 coding downstream 633673 9175099 ~ 9180830 (+)
mc3r mc3r,LOC108265186,LOC108425022,LOC103045867,LOC107751456 coding downstream 752954 9294380 ~ 9295483 (+)
G129218 NA non-coding upstream 252947 8228740 ~ 8230136 (+)
G129170 NA non-coding upstream 297895 8183169 ~ 8185188 (+)
G129125 NA non-coding upstream 354653 8128161 ~ 8128430 (+)
G129104 NA non-coding upstream 402806 8079967 ~ 8080277 (+)
G129098 NA non-coding upstream 411141 8071732 ~ 8071942 (+)
G129401 NA non-coding downstream 4344 8545770 ~ 8545996 (+)
G129407 NA non-coding downstream 8343 8549769 ~ 8549982 (+)
LOC117597837 NA non-coding downstream 138216 8679642 ~ 8717232 (+)
G129440 NA non-coding downstream 182238 8723664 ~ 8724070 (+)
G129439 NA non-coding downstream 184026 8725452 ~ 8725888 (+)
G129247 borcs6,si:dkey-72l14.4,LOC107717508,LOC107711970,LOC107556497,LOC107669648 other upstream 170427 8307164 ~ 8312656 (+)
LOC113526371 NA other upstream 511334 7968235 ~ 7971749 (+)
smim1 smim1 other upstream 621513 7856004 ~ 7861570 (+)
mrps36 LOC108265361 other upstream 1052086 7424001 ~ 7430997 (+)
phf19 phf19,LOC107599052,LOC106580128,LOC106585785,LOC107674297 other upstream 1671437 6756763 ~ 6811646 (+)
cebpb LOC108265421 other downstream 920662 9462088 ~ 9471279 (+)
LOC113532719 LOC108265185 other downstream 1119389 9660815 ~ 9665693 (+)
G130390 NA other downstream 1816520 10357946 ~ 10358315 (+)
zmynd12 zmynd12,rimkla,LOC106567384,LOC101062827 other downstream 2002493 10543919 ~ 10563561 (+)
tmem51a tmem51 other downstream 2141652 10683078 ~ 10696831 (+)

Expression


Co-expression Network