adipor1b (adipor1,adipor1b,LOC108425077,LOC107679819,LOC107594512,LOC107711855)


Basic Information

Item Value
gene id adipor1b
gene name adipor1,adipor1b,LOC108425077,LOC107679819,LOC107594512,LOC107711855
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 9510939 ~ 9519258 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922619.2
aggacctggcaaccctgcagaCTGTCTATTCCCGGAAGAACGTCTCTCGGTAGGCCAGCTAGGCTAGTTAATCATTGCTGCTTTATAGTCAGGCTTAAAATAAACCGCAGCAGACCTGGTTAAACAACACATGCACACCAAAAGTAGAGATTATTGTTTTAGATATCTAGGACTGACCTCGCCAGTTAAGTTTATCTGGAGCACAGAGAGATTGTCTGGATTAGTAATTTGTTAGCTAGCGTATTTTAACGTGTAGTTAGcattgtagctagctagctggccattttgtctttttgctgACACTAGTGGGCTGAAAGCGTAAATAATCCGCAGCGTCTATCAGGAACCTTGAACAGAAGGATTGCTTCTCTGATACGACATTTCTCCATTAACGGCCCTGTGTATAGGATCACGGGACGTTGATTGTTGGCTGTGGGGTAAGGTGGGGTCTCTGGGGAGCTTTAGGTTTGTCTTCCCATGACAACGCGACACCATGGCAGCAACGGCTCCAGCAGCGATGCCGAGTGCCGGGTCTCGGAGGACGAGAGGAACACGGAGGACATGGAGCTCACTGAGCTCGGACCGCTGCTGACGAGTCCAGAAGCATCGACCAAAACCAGAGGTGCAACAGCTTACCcgagtgaggaggaggaggaggaggaggatgatgatgatgatgacaatgatgaggaggatgaccTGCAGGTGGTCACACTGCCTCTGCAGGCTCACCATGccatggagaaaatggaggagtTTGTACACAAGGTATGGGAAGGGCGCTGGCGAGTGATTCCTTTCCACTTGCTTCCTGATTGGCTAAAGGATAATGACTACCTACTTCATGGTCACCGGCCACCCATGCCATCTTTCCGAGCCTGCTTTGGAAGCATCTTCAGGATCCATACAGAAACAGGGAACATCTGGACGCACTTACTGGGTCTgatcctcttcctctttctggGCACTTTGACCATGCTGCGGCCGAATGTGTCGTTCATGGCTCCTCTGCAGGAGAAAGTGGTGTTCGGGATGTTTTTCCTGGGCGCTGTGCTCTGTCTCTGCTTCTCCTGGCTCTTCCACACAGTCTACTGTCACTCAGAGAAAGTGTCCAGGACATTCTCGAAGTTGGATTACTCGGGTATAGCTTTGCTGATAATGGGCTCATTCGTGCCATGGCTCTACTACTCGTTTTACTGCTCTCCACAGCCACGCCTCATATACctctctgtggtgtgtgtgctgggcaTCGCCGCCATCATCGTGGCACAGTGGGATCGCTTCGCCACTCCACGCCACAGACCTACACGTGCAGGTGTGTTCCTTGGCCTGGGACTAAGTGGCAtcattcccacaatgcacttcaCCATCGCTGAGGGCTTTGTGAAGGCCACAACAGTGggccaaatgggctggtttatCCTAATGGGTGCCATGTACATCACTGGAGCCGGTCTGTATGCAGCGCGCATCCCTGAACGCTACTTCCCCGGGAAATGCGATATCTGGttccaATCTCATCAAATATTCCACGTGTTGGTGGTGGCTGCAGCGTTTATTCACTTCTATGGCATCTCCAACCTGCAGGAGTTCCGCTACGGTCTGGGGGGAGGCTGTACAGACGACTCCCTCCTCTAAACAACTCCATCCTTCTCTCCGCTTGCTTTCCACTCATCACTTCAGCGCTGAAGTGATGAgcattttgaacatttctggATCAGTTGTGGTTGGAAAGAGCTATTGTACTCCACTGCCTACCCTATGCTCACTGATCAGAAACTGTCCTAAGATTGTTATTGACTTTAAGGGATTATTATCtatattttaaaaggtttatacaatcatcagtgtgttttattgttgtaaTACTTGAAGACCTAATAAGTAAATCTTACTACTcagttaaaggaatactccagcggttttcaacctaatctctattgACTAGAATCTaacatctgtagtgtatgtgtgataacCACAGGCAAGAATTACGACATATTTCCCTGTAGTGAGAAAAACTTATTTACTCTGAACTTGTCATAATGTTACAGCAACCTTGAGTGTTAGAAAAGCGCTATATATATGGAAAGCATTTTTAAGTCTTGGAGCAGTTGTAAAgtacaacaataataaatgcttaaattCCATGACTATATATCATAAATTCAAAAATACAACTGTTACATTCTTCATAATAAAGGTCTTAGGATGATACAGACATCAGAGAATGACTTATCAACTTGCTTACACTTTCACCATTTCCCTTTCATAGCTTTGTGGTATTCATGCCAAGAGGGAAATGAGGTacctgtgtgtttctgtctatGTTGGTAAAGTAATACCACAAATTATACCCCTCTGTTCTGCagaaatacataataaatatttgcataaaGATTATTAACTGCCCAACAACTGCCTGAGACTTCCATTATATGTGAGTTTAAAGCAAAAAGGTTTTTAGtccattcttttctcagtagAGGGAAATATAAATTCTTGTTCCTGGTTATTACACAAACACTATGTATATGGTAGATGAAATGATATTTGGTTGAAAAATCCTGGACTATTTATTTAGGCATTTATTCACGGTTCAGTTTTCAAGGCACTGTCACACTGCTGGGGGGGAAATTTCTATCTCGTGAGGCATTTAGTCATAGACCACTGAGAGGTGTGTGAGCAGTGCTACCTCTTCCTGTCTTGTTCAGTCTATACACACTGTTGGATAAACATGCTCCAGATCTGAGAGCAGTAGCTACGAGTTTTGGGCGGTGCAGGTATCTAGAACTACGAAAACAGGTATAAAATATTAACGTCTTTCATCTGCTGTAAATGATTTCATGTAATAATCTGTAGAGTTTGTGACAAAATTGAATTTTCCTagataaatttttaaatgtttccttGGTCAA
>XM_026922629.2
aggacctggcaaccctgcagaCTGTCTATTCCCGGAAGAACGTCTCTCGGTAGGCCAGCTAGGCTAGTTAATCATTGCTGCTTTATAGTCAGGCTTAAAATAAACCGCAGCAGACCTGGTTAAACAACACATGCACACCAAAAGTAGAGATTATTGTTTTAGATATCTAGGACTGACCTCGCCAGTTAAGTTTATCTGGAGCACAGAGAGATTGTCTGGATTAGTAATTTGTTAGCTAGCGTATTTTAACGTGTAGTTAGcattgtagctagctagctggccattttgtctttttgctgACACTAGTGGGCTGAAAGCGTAAATAATCCGCAGCGTCTATCAGGAACCTTGAACAGGATTGCTTCTCTGATACGACATTTCTCCATTAACGGCCCTGTGTATAGGATCACGGGACGTTGATTGTTGGCTGTGGGGTAAGGTGGGGTCTCTGGGGAGCTTTAGGTTTGTCTTCCCATGACAACGCGACACCATGGCAGCAACGGCTCCAGCAGCGATGCCGAGTGCCGGGTCTCGGAGGACGAGAGGAACACGGAGGACATGGAGCTCACTGAGCTCGGACCGCTGCTGACGAGTCCAGAAGCATCGACCAAAACCAGAGGTGCAACAGCTTACCcgagtgaggaggaggaggaggaggaggatgatgatgatgatgacaatgatgaggaggatgaccTGCAGGTGGTCACACTGCCTCTGCAGGCTCACCATGccatggagaaaatggaggagtTTGTACACAAGGTATGGGAAGGGCGCTGGCGAGTGATTCCTTTCCACTTGCTTCCTGATTGGCTAAAGGATAATGACTACCTACTTCATGGTCACCGGCCACCCATGCCATCTTTCCGAGCCTGCTTTGGAAGCATCTTCAGGATCCATACAGAAACAGGGAACATCTGGACGCACTTACTGGGTCTgatcctcttcctctttctggGCACTTTGACCATGCTGCGGCCGAATGTGTCGTTCATGGCTCCTCTGCAGGAGAAAGTGGTGTTCGGGATGTTTTTCCTGGGCGCTGTGCTCTGTCTCTGCTTCTCCTGGCTCTTCCACACAGTCTACTGTCACTCAGAGAAAGTGTCCAGGACATTCTCGAAGTTGGATTACTCGGGTATAGCTTTGCTGATAATGGGCTCATTCGTGCCATGGCTCTACTACTCGTTTTACTGCTCTCCACAGCCACGCCTCATATACctctctgtggtgtgtgtgctgggcaTCGCCGCCATCATCGTGGCACAGTGGGATCGCTTCGCCACTCCACGCCACAGACCTACACGTGCAGGTGTGTTCCTTGGCCTGGGACTAAGTGGCAtcattcccacaatgcacttcaCCATCGCTGAGGGCTTTGTGAAGGCCACAACAGTGggccaaatgggctggtttatCCTAATGGGTGCCATGTACATCACTGGAGCCGGTCTGTATGCAGCGCGCATCCCTGAACGCTACTTCCCCGGGAAATGCGATATCTGGttccaATCTCATCAAATATTCCACGTGTTGGTGGTGGCTGCAGCGTTTATTCACTTCTATGGCATCTCCAACCTGCAGGAGTTCCGCTACGGTCTGGGGGGAGGCTGTACAGACGACTCCCTCCTCTAAACAACTCCATCCTTCTCTCCGCTTGCTTTCCACTCATCACTTCAGCGCTGAAGTGATGAgcattttgaacatttctggATCAGTTGTGGTTGGAAAGAGCTATTGTACTCCACTGCCTACCCTATGCTCACTGATCAGAAACTGTCCTAAGATTGTTATTGACTTTAAGGGATTATTATCtatattttaaaaggtttatacaatcatcagtgtgttttattgttgtaaTACTTGAAGACCTAATAAGTAAATCTTACTACTcagttaaaggaatactccagcggttttcaacctaatctctattgACTAGAATCTaacatctgtagtgtatgtgtgataacCACAGGCAAGAATTACGACATATTTCCCTGTAGTGAGAAAAACTTATTTACTCTGAACTTGTCATAATGTTACAGCAACCTTGAGTGTTAGAAAAGCGCTATATATATGGAAAGCATTTTTAAGTCTTGGAGCAGTTGTAAAgtacaacaataataaatgcttaaattCCATGACTATATATCATAAATTCAAAAATACAACTGTTACATTCTTCATAATAAAGGTCTTAGGATGATACAGACATCAGAGAATGACTTATCAACTTGCTTACACTTTCACCATTTCCCTTTCATAGCTTTGTGGTATTCATGCCAAGAGGGAAATGAGGTacctgtgtgtttctgtctatGTTGGTAAAGTAATACCACAAATTATACCCCTCTGTTCTGCagaaatacataataaatatttgcataaaGATTATTAACTGCCCAACAACTGCCTGAGACTTCCATTATATGTGAGTTTAAAGCAAAAAGGTTTTTAGtccattcttttctcagtagAGGGAAATATAAATTCTTGTTCCTGGTTATTACACAAACACTATGTATATGGTAGATGAAATGATATTTGGTTGAAAAATCCTGGACTATTTATTTAGGCATTTATTCACGGTTCAGTTTTCAAGGCACTGTCACACTGCTGGGGGGGAAATTTCTATCTCGTGAGGCATTTAGTCATAGACCACTGAGAGGTGTGTGAGCAGTGCTACCTCTTCCTGTCTTGTTCAGTCTATACACACTGTTGGATAAACATGCTCCAGATCTGAGAGCAGTAGCTACGAGTTTTGGGCGGTGCAGGTATCTAGAACTACGAAAACAGGTATAAAATATTAACGTCTTTCATCTGCTGTAAATGATTTCATGTAATAATCTGTAGAGTTTGTGACAAAATTGAATTTTCCTagataaatttttaaatgtttccttGGTCAA

Function

symbol description
adipor1b Predicted to enable signaling receptor activity. Acts upstream of or within retinal rod cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including EVL; brain; fat cell; head; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1).
adipor1 Enables adipokinetic hormone receptor activity; adiponectin binding activity; and protein kinase binding activity. Involved in several processes, including adiponectin-activated signaling pathway; negative regulation of epithelial cell migration; and negative regulation of signal transduction. Located in plasma membrane. Is intrinsic component of plasma membrane. Implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Biomarker of obesity.

NR:

description
PREDICTED: adiponectin receptor protein 1

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042562 hormone binding molecular_function

KEGG:

id description
K07297 ADIPOR; adiponectin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922619.2 True 2918 mRNA 0.44 8 9510939 9519258
XM_026922629.2 False 2915 mRNA 0.44 8 9510939 9519258

Neighbor

gene id symbol gene type direction distance location
mc3r mc3r,LOC108265186,LOC108425022,LOC103045867,LOC107751456 coding upstream 215456 9294380 ~ 9295483 (+)
LOC113526950 LOC108266051 coding upstream 330109 9175099 ~ 9180830 (+)
pym1 pym1,LOC102777374 coding upstream 341363 9165978 ~ 9169576 (+)
sema3b sema3b,LOC107717529,LOC107556489,LOC107669651 coding upstream 508115 8950214 ~ 9002824 (+)
LOC113533404 NA coding upstream 595128 8902248 ~ 8915811 (+)
LOC113534601 klhl12 coding downstream 2196 9521454 ~ 9537110 (+)
tuba5 tuba8l,LOC108425079,LOC108265838,LOC107711852,LOC107679810,LOC107594520,LOC103031418 coding downstream 19575 9538833 ~ 9543279 (+)
kdm5bb LOC108265643,LOC108425081 coding downstream 28048 9547306 ~ 9573038 (+)
LOC113536035 LOC108265641 coding downstream 55124 9574382 ~ 9582740 (+)
LOC113526970 NA coding downstream 75532 9594790 ~ 9601084 (+)
G129849 NA non-coding upstream 15209 9450562 ~ 9495730 (+)
G129850 tmem189,LOC107556313,LOC107751443,LOC107669672,LOC108425075,LOC107711858 non-coding upstream 56530 9453034 ~ 9454409 (+)
G129831 NA non-coding upstream 172989 9324708 ~ 9337950 (+)
G129805 LOC108265845 non-coding upstream 198488 9309503 ~ 9312451 (+)
G129707 NA non-coding upstream 376004 9119938 ~ 9134935 (+)
G129971 NA non-coding downstream 80937 9600195 ~ 9602532 (+)
G129996 kcnd3 non-coding downstream 152809 9672067 ~ 9672335 (+)
G130021 NA non-coding downstream 196398 9715656 ~ 9715868 (+)
G130231 NA non-coding downstream 514092 10033350 ~ 10033565 (+)
G130285 NA non-coding downstream 566303 10085561 ~ 10147134 (+)
cebpb LOC108265421 other upstream 39660 9462088 ~ 9471279 (+)
G129247 borcs6,si:dkey-72l14.4,LOC107717508,LOC107711970,LOC107556497,LOC107669648 other upstream 1198283 8307164 ~ 8312656 (+)
LOC113526371 NA other upstream 1539190 7968235 ~ 7971749 (+)
smim1 smim1 other upstream 1649369 7856004 ~ 7861570 (+)
mrps36 LOC108265361 other upstream 2079942 7424001 ~ 7430997 (+)
LOC113532719 LOC108265185 other downstream 141557 9660815 ~ 9665693 (+)
G130390 NA other downstream 838688 10357946 ~ 10358315 (+)
zmynd12 zmynd12,rimkla,LOC106567384,LOC101062827 other downstream 1024661 10543919 ~ 10563561 (+)
tmem51a tmem51 other downstream 1163820 10683078 ~ 10696831 (+)
abl2 abl2,LOC107657876,LOC107699422,LOC107599009,LOC107758002,LOC107707589,LOC107603207 other downstream 1187461 10706719 ~ 10741425 (+)

Expression


Co-expression Network