zbtb34 (LOC108265239)


Basic Information

Item Value
gene id zbtb34
gene name LOC108265239
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 19245748 ~ 19264636 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925056.2
CGCATGCGCATTGCCAAGCGGGCCGGAGACGGAGATTGGGTAGtgacaacagcagcagcagcggcagcagcagctggtgaaggaggaggaggaggaggcggcTAGACTGGAGCTAAAGCGAGTCGCTCCGGGGGGAATGGACAGCATTTAAGCCGGAACGGCTTTCTGCAAACCAGGTGAGACATCAGTGAGTCATGGAGGACGAAGGCAGCTTCATAGAGTTTGATGTGCCAGAGTTCAGCAACACTGTTCTTAAGCAGCTCAATGAGCTGCGGCTCCAGGGTAAGCTCTGCGATATTATTGTGCACATCCAGGGCCGACCATTCCAGGCACACAAAGCTGTGCTGGCTGCCAGTTCACCATACTTCCGTGACCACTCGTCTCTAGGCACCATGAGTGGGCTCTCCATCTCGGTGATCAAGAACCCGGCAGTGTTTGAGCAGCTATTAACCTTTTGCTACACGGGACACATGGAGCTGCATCTGCGTGATGTTGTTAGCTTCCTTACTGCCGCCAGCTTCCTGCAAATGCAGGCTGTCATCGACAAGTGTACCCAGATCCTGGAGGGCCTCCATTCAAAGATCAGTTTGCCTGTGGTTTCTGGCCAAGCAGAATCTGAAGAAGACCTCGATTCTAGAGTGGGACACAATGGTGCAAAAGAGATGGGTATTTTTTTGAATCCTACCCAGATTTCCCCACCCTATTACCCTAGGAAAAGCCATCGAGTAGAAGCAAGTGGAGGTGGAAAAGGGCTTGTGCACTTAGCAGAGGAGGGGCAATCAGATCGAGGGAGCGATTGCGCTTCAGAGCAGGAGGCATCAATGGAAGTAGAGCCTGACCAAGTAGACTTGATTGAAAAGAACGGGCAAGTCGCTGATATACACATCAAGTTGGAAAAAACGGAGCGGCCCAGCTACTCAGACAGCTCTTCGGCGGGCGATGATAGCTTCCACACAGAACTGGTGGATGGTGAGCAAGTTTTAGCTGTGACTGTGGGACCTTATGGGCCAGTGCCACCCCCTGCTCAGTACACCTATTCAGCACTTCCTTCATCCTGCTTTGTCGGTATCAGTCCATCCAGTCCCTCTCAGTCAATTCTCAGTGGATTTCGAGGTGGCCGCACCAGACCTAGGCGGAATATGCCAGTCCCGGCTGATGTACTTTCTCAGCTTAAGCCAGGCGCAGAGGAAGGAGAGGGAATGGCATCAGGAGTTGTTTTTGAGAATGACGTGAGGGAACGAGGTCTCCGTGGCCATTGGTATCCTTTCAACGAGCGCCTTGTTTGTGTCTACTGTGGCAAGTCCTTCAACCAGAAAGGCAGCCTGGACCGCCACATGCGTTTGCACATGGGCATTACTCCATTCGTCTGCAAGTACTGTGGCAAGAAGTACACGCGCAAAGACCAACTAGAGTATCACATCCGTGGCCACACGGACAATAAACCCTTCCACTGCCAGATTTGCGGCAAGTGCTTCCCTTTTCAGGGCACCCTCAACCAGCACTTGCGCAAGAAGCACATGGGTTCCGGCGTCGAGGTGAACAACCACACAGGCCCACAGGGGGAAGCAGCAGATGGCCAGCGAGGGGCGCCAGTGGAGGTTTCGGAGATTGTGTACAACGATACCTATAATGATGATGGGTCTGCAAAAACGAGCGAGGAGAGTGTAAAAGGCAGTGCCGAAGAACCCCCTGGGCCCAGATGTGATTAAGATGTTGACCGTTTCTTGAGAAGTGGATGTTGAACCTGCCTTGCGCATTTTCTACTAGTACATTTTTGTGATCTGGTTTAAGAAGAGATAATGCATTCTTGATAAGCAAGTTTTTCAAAGGTGAGGGGAATTGTAGTCAGGGAGAAGGATTGAGTGAGACATCTCAATAATTAAGGccttcaaagttttttttttttttttatgttttttttatagataaataTTTCCATGTTTTTAAGCATAGAGTAATATAGGCATGTtgcaataatgaataatgtgaaaGCTCAGTTAAGATGCTTGTCATATCATGCTTTTACCTGACCTGTTTTTGCACATTTGGCCTCAAGTAGGCCAATAACTCACAAGGATTGGTTTTACCTACCAGTGCAAAAGCTCTGTGACACATCTGTTCAATACCTCATCATACAATGTAACATACTCACAATATGGCAGTATTGTCAAAGTTTATTCAGCTCCAACCGGGTTCTACCTCAGTCCAGAACCTGAAAGGAAGTGAACAAGCATCTTGTTTTAAAAGGTTTCATTTGCTTTACATAGCAATTTTGGCACAACACATTTTCACTACACAAAGCTTTGGTACTACATTGAACTGTTTGTTTGAGACTGTATGAAATCCAGACTGCTGTcattggatttttaaaaatgctatgtTTCTGAGAAAGGTGCTTTTTGGGTGGTTAGG

Function

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 34

GO: NA

KEGG:

id description
K10508 ZBTB34; zinc finger and BTB domain-containing protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925056.2 True 2412 mRNA 0.48 2 19245748 19264636

Neighbor

gene id symbol gene type direction distance location
lmx1bb lmx1b,lmx1bb,LOC108434405,LOC107723253,LOC107550585 coding upstream 45643 19143547 ~ 19200105 (+)
vgll4l LOC108265912 coding upstream 948267 18291489 ~ 18297481 (+)
dgcr6 dgcr6,LOC108265986,LOC103029434,LOC107721026,LOC108430318,LOC107572069 coding upstream 970280 18273663 ~ 18275468 (+)
rpl6 rpl6,LOC107699672,LOC107671003 coding upstream 987024 18252746 ~ 18258724 (+)
acaa2 acaa2,LOC107671002 coding upstream 994044 18241929 ~ 18251704 (+)
ralgps1 ralgps1,LOC108412534,LOC107669254,LOC107727327,LOC107723240 coding downstream 5990 19270626 ~ 19389662 (+)
LOC113533125 LOC108265174 coding downstream 134102 19398738 ~ 19404045 (+)
LOC117595725 LOC108265174 coding downstream 154114 19418750 ~ 19419938 (+)
LOC113533274 LOC108265174 coding downstream 219539 19484175 ~ 19489558 (+)
LOC117597842 LOC108265174 coding downstream 236857 19501493 ~ 19502708 (+)
G135101 NA non-coding upstream 290547 18949227 ~ 18955201 (+)
G135090 NA non-coding upstream 361967 18883368 ~ 18883781 (+)
LOC113533586 NA non-coding upstream 372127 18870417 ~ 18873621 (+)
G135085 NA non-coding upstream 433038 18812490 ~ 18812710 (+)
G135076 NA non-coding upstream 512118 18733398 ~ 18733630 (+)
G135164 NA non-coding downstream 4698 19269334 ~ 19269668 (+)
G135169 NA non-coding downstream 57326 19321962 ~ 19323271 (+)
G135292 NA non-coding downstream 143918 19408554 ~ 19484934 (+)
G135294 NA non-coding downstream 167996 19432632 ~ 19516745 (+)
G135309 NA non-coding downstream 221262 19485898 ~ 19486457 (+)
pbx3b pbx3,pbx3b,LOC108434408,LOC107550583,LOC107669256,LOC107555108 other upstream 563816 18436185 ~ 18681932 (+)
vdac3 vdac3,LOC107754399,LOC107560056 other upstream 1196859 18030975 ~ 18048889 (+)
G134341 NA other upstream 1948865 17296111 ~ 17296883 (+)
gucd1 gucd1,LOC102792582 other upstream 2376980 16859976 ~ 16868768 (+)
bicdl1 bicdl1,LOC107724381,LOC107699624 other upstream 2507764 16716133 ~ 16737984 (+)
G135287 LOC108265174 other downstream 222851 19487487 ~ 19502643 (+)
LOC113533656 gnas,LOC108261582,LOC108265241,LOC108434415,LOC104936173,LOC102796627 other downstream 561162 19825798 ~ 19902367 (+)
LOC113533164 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 916132 20180768 ~ 20185618 (+)
LOC113533440 erc2,LOC108264953 other downstream 957779 20222415 ~ 20442191 (+)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other downstream 1479944 20744580 ~ 20747856 (+)

Expression


Co-expression Network