inpp5l (LOC108265505)


Basic Information

Item Value
gene id inpp5l
gene name LOC108265505
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 24434729 ~ 24465696 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925320.2
TGGGCGTGTCTTACAGATTTTACGAGTGATAAACAGCGCCAGAAAGACGCTTGATGTGATGCAGTGCTGTAGAAActgctgcagtgtgtagtgtagtgttcaTGCCGGTAAGAACCTGGAGTCCGAGTAACATGAACGCAGGAGGAGAACTGCAACCGTCTCCGTGTCAAGTGGACTTGAAGACttgaagaaagaaagtgaaaaatgctgAGCGCCTTCAGTGAAACCGGAGCACCACTCACAACATGAGGCATGTCGGTTTGAACGTCGATATGAACTATGTGCTGAAGATAAGATAGAGCAGCCGAGTTTTATTGTCAACTGGTTTTCAGCTGCTTGCGAAAGGCACCTGCAAGAAACATCCATCAGTCAGAAGACTTTCCTGTCCCGGACTAGTTTATCTGGAGCTGGAGAATGATGGAGACGCTCACTGACGTTTTACTAGTCACTGCAAATGTAGGCTCGTTATTTGACAACCTGGGTGAAATCCAGAATGACTGGCTGCGAGAGTTCTTCACAACTGTGGACAGATACAAGCCTCGCTTCGTCGCCCTGCACTTTCAGGAGGTCGGGGGGAAGGACTACAAGGCCAACATGGCTCACGCTGAAAACTTCTTCTGGACCATCGAGTCCAGCTCGGAGATGTCAGAGTTTGACCGAGCGTGTGTCTACGTAGACAGcgacttcaagacagaggacaaCTTCACGgCCCTCGGGAGCATGTACTTCATCCACAAATCTCTGGAGAACATCCAGCAATACGATTTCAATGCAAAGGAGTTCAAATTGGTGTCGGGACGCAACAAGTACGCAGGTTCGCTGTACGGAGTCACGACAGTGGAGAAGGAGAAGTTCCAGAGGGACTTTTGGCCAGATagaaagTGGTCAAGAAAAGGATACATGAGGACACGGTGGATGATTCACAACCAgggccTGGACTTGGTGAACGTACACCTTTTTCACGACGCTTCAAACCTCGTGGCCTGCAAATCCAGTCCCTCGGTGTACTCCACATATCGACAGAAAGCTCTCCTCTACGTCATCAGCAGGATATCTGATGACTTCAGCCCACTGCCATTCTTCCTGTTTGGAGATTTTAACTTCCGCCTCGATACACTAAGTCTAGTACAGGACCTCTCCACATCTGCAGAAGTACAGATGGTGATGAAGGACAGCACTAACGAAGTGGAGAAAATCATCTATGAGGAGAAAGGCAACGACCAcaagGTGCTATTTCAAATAGAGACTAAGCGGTTTTTATACCTGCACCACAAACTCTTCAGAGAGGACACTGGACGAGAGCTCCTGGAGTACGACAGGGAGAGAGCGGCCTTCCAGGACATCATCACAGAAGAGGAGATTCTGTTTCCTCCCAGTTATCCCTACAGTGAAGACTACACTAAACCCACGCAGTACATGAACACTCGATGTCCATCCTGGTGTGATCGCATCCTCATGTCCCACAATGCACAGGACGTCATCTACAGGAGAAATGGAGACGGTAACATTGTATACAACATCCTGGGACCAAAGGTCTGCATGGGAGACCACAAGCCTGTCTTCTTGTTCTTTGCACTGAAATCCAACATCCAGTGATGTAGAATATGGACCCATTAAAGGGTTTGCTGGTTTGCATCCATGGAGAAGAACAGGGTTTAGGGACGGCTGTTCTTCGGCTACAATAACTCACAACCTGCGTAGACCTCAAACCGCACACAAGAAAGGGGCATATTTCTTAAAGAGAAATTAAGCAAACAAACCGTAGTACACATTCTACAGTTTTACAGTTCTCAAGAGATTTCTTTCCCTCAGTTCTAGATATTATCACCAGTCTTCTGTCTAAAACCTACAATCTTGGAATGCATGCTAATCActagttgttttattttattttattttttttaaactttatattactAGCATGCTTACTGCAAGCTAACTCCAccatacaccacacactgctgaaTTGCACAGGCTGCTCAGTCAACATTCACCCACTCACATTCTGATTTTAAATACAcgtttttttaagcatttaaaccTTTATGTAGTATGTGTTCAGTGTTGCTGACGCTTTCACTGTGGCCCTCGAGCTTCTCCGTATCTCAGCGGTGCTGTAAGTCAGAGATCCTCAGATCAATGGAATATGTACGCAGCGACCGCCGGGGACGATTTCGAAAGCCATCAGCACTGTGCGAAATATGGAAATCCGTCCCAAAGCAGCGAAGCCTGACAAGCCTGCAGACTTTTAATTACAGCTTCCGTTTCAGCTACAACCGCTAACATACAACAACACCCTGTAAAGCTTAAGGTATATTccgtaatgttttttttttgagcattaTTTTTGgttgtgaggtgtgtgagggaTATAGTCAGTCAAAAATATAAGAAACTTTTATTACTGTGAGGAGACCTTAGTCGTCTTAGTTATCGTTTTCTGCTAAGTATAACAAGCCAAGTTCATTACCAAATCTGGTATTGTGTCATCATCATGCTGCTATAATGGCTCCCAGCATGAGAATACTGATTTCCTGTCTATACTTAACTATCTATTACTAATAATCTGGTGGCAAGGCAAGCTATGTGTCCAGTGGTGTCCTATATTCCCTTAAAGAAACACAACCATGCAACATATCTTTAGTTGTATTAGATTGATCTGTGAATAGTTTTGCATTTATTCCTTTATATTTGACTTGGATTTGTTTTGCTTCTTTTATCCTGGGTTTATCCTGTTAATAGCACAGCGGggttttttatgaattttaattaaGACTCCATTTTAAGTTTCTTTAGTGGCCTAATCACACAACGAGTCCCATCATGGATCATTAAGCTCGCAGTGTAAAGACGACAGATCGCGGTCGCAGGTCATACAGTGGACGTTTTTAGATTTCAAAACCAATTTGGTCCACTAATTATCAATATTCATTAACCGCCATTTAggcatgcacaaaaaaaatgatacagatATGACAAGTAGGCCATTATTTCATTTCCACTAGGATTTATCGATCTATCCGTGTAATCTAAATACCCCCCCAacctgagatttttttttttttttttttttttttttcgaatcAGCTCAATAATTTACGTGCGAGGGTTAAATTGCACGGCCCATTTGTCAATAATGGACTTGTTGGAGTTGATCCATGATGGTGCTGGACATAATGCATTGCTCCTGAGAGCTTTGCTCCAAGCTGAAGTTCAATACGAGGCTGTGATATTGCTCAATGAGAAGCACTGATGTTCTTTTGGcatttgtgattttaaaatgagatcgaaacactaattttttttttaaaccgtaATTTATATCTTTTGTACGTTGTAAGGGGCACTGATCGTAGCTGGGAGTCTCTTTGGGCTCATGTAGCCACTAATGTTTGCACTTACTGgggatgtgttttattttacacagagTTGACTTAGGACCACTAAGAATATTACTGCAGTTTAAGTAGCGTTTTTAGAACGTTTGTTCAAAAAGTGTCATTATTTGAATTAGAGATTTGATCACACACAGGGTTGATAATACaaacatatgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagagtgaTACAAGAAATGTCATGTTATGCCTTACTGGTGTGTGATACATCCCTTGATATATAagattttaaagcttttttcttAAAGACGAAACATAccaagtgaaaatgaaaaaaaaaaacaagcaaaacaaaaacagctctTTATCAAGTCAAACCATTTAATATCTGCGCTGCAGCTAAATGATATTGAGCTGTagtttttatatctttaaaattTCATAGTGTTCTGCTTCTAATGTGAATTTCATAACCTCCACTATTCATATTGTAAGACAGTTTAACTATTAACTCTGCGTAAGATGTCTACAGCTATAACCACACTTACATGGCTTTGCTCCAAAACAAATGAGCACTTAACACCCTTGAGGTGAAATGGGTCCAAGTGatttttcctctcattttattttgttttatttgttcagacagacagatgagggCAGCTTGTCCGGCTCATCGGCATGTAAAAGAGGAAAGCCAGTTAAATCCTGACTTGTCGTAGTCATTAACACACTCGAGGAAATTAATGGCACTGTGATTCCGGCAGTTTTCAGGGTTTCTGCTGATTGCCAAGGGGAAAGTTGTCAATAGAGGGATGGTGCTTGGAAAAGTCTCACCTTAACAATTATATTCATTCcctaaaataatcaacaaaattTGCCTAATGCATTATCACAGTATGTCGTTCTAAGCTTAGGTTCTATTCATGAGTCAAGCAGATTGCGCCAATTGTGTCATATAACGTATAAATATATCTCATTTTTAttcgttttgtttttctttttgaatttcctgtttatcaTATTTATCCAAAAGAACATCAGGAAGCAGTTATTAGACTGCGTTTATACCTCTTAAGCAGCTGAATGTCAAGTTGCTGTTGGCATTAAACCTAAAAtgaatgtttcattttcaaatgGTATGTTAACCTaaactgtatgttttatttCCCTATAAAGTGTATCTATAAATCATGAAATGTGTCCTTTGTTATTTATACCAAAGATAATTTTTGGTTGGAATAAACCTTggaatggattaaaaaa

Function

NR:

description
PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase-like

GO:

id name namespace
GO:0046856 phosphatidylinositol dephosphorylation biological_process

KEGG:

id description
K01106 INPP5A; inositol polyphosphate 5-phosphatase INPP5A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925320.2 True 4701 mRNA 0.40 17 24434729 24465696

Neighbor

gene id symbol gene type direction distance location
LOC113533124 gpat4,LOC108426719,LOC107740984,LOC107683875,LOC102786815 coding upstream 3860 24408174 ~ 24430869 (+)
foxb2 foxb2,LOC107726218 coding upstream 38885 24393579 ~ 24395844 (+)
LOC113533424 gcnt1 coding upstream 59209 24372757 ~ 24375520 (+)
pcsk5b pcsk5,LOC107691579,LOC107548272,LOC107723238,LOC107702857 coding upstream 72804 24317883 ~ 24361925 (+)
ubap2b LOC108265340,LOC108426724 coding upstream 124605 24296087 ~ 24310124 (+)
LOC113533523 LOC108265504 coding downstream 9890 24475586 ~ 24482568 (+)
LOC113533128 NA coding downstream 29807 24495503 ~ 24498780 (+)
sorbs3 sorbs3,LOC108265711 coding downstream 39501 24505197 ~ 24559028 (+)
pdlim2 pdlim2,LOC108265771,LOC103022934,LOC107740981,LOC107724143 coding downstream 96235 24561931 ~ 24624156 (+)
adgra2 adgra2 coding downstream 166528 24632224 ~ 24691440 (+)
G138280 NA non-coding upstream 70968 24362949 ~ 24363761 (+)
G138239 NA non-coding upstream 310160 24121610 ~ 24124569 (+)
G138176 NA non-coding upstream 444632 23989898 ~ 23990097 (+)
G138014 NA non-coding upstream 684361 23747463 ~ 23750368 (+)
G137651 NA non-coding upstream 1331063 23100607 ~ 23103666 (+)
G138535 NA non-coding downstream 36390 24502086 ~ 24502371 (+)
G138578 NA non-coding downstream 181083 24646779 ~ 24647451 (+)
LOC113533328 LOC108265709 non-coding downstream 265291 24730987 ~ 24783425 (+)
LOC113533216 NA non-coding downstream 382372 24848068 ~ 24849544 (+)
G138907 NA non-coding downstream 811601 25277297 ~ 25284948 (+)
fkbp1aa fkb1b,fkbp1aa,fkbp1a,fkbp1ab,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other upstream 420948 24011582 ~ 24013781 (+)
praf2 praf2,LOC107756831,LOC107702816,LOC107691574,LOC107565129 other upstream 540004 23890416 ~ 23894725 (+)
G138010 iqsec2,LOC108265842,LOC108442091 other upstream 677615 23750417 ~ 23757114 (+)
pabpc1l pabpc1l,LOC108265404,LOC108414618,LOC107573965,LOC107702880 other upstream 910024 23514586 ~ 23524705 (+)
tprg1l tprg1l,LOC107710788,LOC107698845 other upstream 1172738 23248348 ~ 23261991 (+)
LOC113533115 gnrh1 other downstream 667045 25132741 ~ 25134258 (+)
egr3 egr3 other downstream 1086198 25551894 ~ 25558731 (+)
LOC117597866 NA other downstream 1443879 25909575 ~ 25916807 (+)
car15 LOC108264895 other downstream 1934495 26400191 ~ 26462321 (+)
LOC117597788 NA other downstream 2097124 26562820 ~ 26567932 (+)

Expression


Co-expression Network