LOC113533655 (LOC108266029,LOC108434414)


Basic Information

Item Value
gene id LOC113533655
gene name LOC108266029,LOC108434414
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 19862102 ~ 19928774 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925932.2
tttcCAACCCAGACCATATTAAAGTGAAGTCaaagcatttctttctttctttcttttctgcacCCTTGTTGCAATGGTGAAACCTTGACCCGGGATATATTTTAGAAGGCGTCATGTGACGGTTGTGAAGATGGCGCAGAGTAATCATATCTCTCCCATCCCTTCAGGACGAGGAGACTCATTTAGAGCCCAGCACTTCAGGACGCACAGCTCCCACCAACATCTGGTGCATGTTGTGACAAGACAAGACGCGTGTGCAGGATCTAAAATGGCTCAAGAAACCCAGCAGGTCCAGTAGAAGGCCAGTAGTGGCTCTGTCGCTCCCAGATACTGCACCAAAGATCAGATTTCCTCTTATTCCCTGCCTGGACTCAGAGACTCAGGGCTCTGCATCACCCACTGTAGATGCttgcttcttcttcatcttgTTCTGGTGGTTGTTTGCGCTTTATTTTTGCTTGAGAGGACAAGCTAAGCTGCGGAATGGAGCGAAGAAGACCTCGGTGTTGCTGGTTTGCTGTAAACACTTAACGTGTAGTGCTGAGTACATTGAGTTCTGCGTGTAGTGGCTGATGGAGTAACACGCTACATTGCTCAGCCCTTCATCTTCAGCATCCTCCCACGACACCGGCGGAATGGAGCAAGCTTTCCAGGCGATTTAAAtccgctctgtctctcttttgaTTTTGAAATAATGTGGATTCCAACGGAAGATGAAAAATTCGGAGTCGtgATAGGCAGTTTCCGAAGTTCAGTCAGTCATTCCCTGGTGCTGGAGCTTGGAGAAACTGTCCAAATCCTGGAGAAATGTGATGgctggTACAGAGGCTTTTCTACCAAAAGACCAACAGTAAAGGGCATTTTTCCAGCCAACTATGTGCACTTAAAGAAAGCAACAGTTACCAACAGGGGGCAGTGTGAGACGGTGGTTCCTCTTGAGGATCCGATTATCACTGAGTGCACCAGCACACTGCAGGAATGGGGAGTGCTGTGGAAACAGCTTTATGTGAAGCACAGAGTAGAGCTATTCCAGAAGCTGCGGCATGTGATGAACGAGCTGATGGACCTGCGGCGTCAACTGATCTTGGGTCACATGACTCAGGAGCAGAGCCGCGAGGTCAAACGCCACATCACTCTCCGCCTGGACTGGGGCAATGAACACCTGGGTTTAGACCTAGTACCAAGAAAAGAGTTTGAGATGGTGGATCCAGACCAGTTCAGTGTATCTGACCTCTACAAGATGcatgCCTCCAACAGACATTGTGGTCAATCAAGTACAGCACAGggccAGCGTCATGGAGATGGCTACCGGGTACCAATTGCTCACCATCTCTTTCTCAACCTAAAAAACTTCACGTATAACAGCATCAATGAAGACGTGGAGGTGTTTTTTAGTCTCTACGATGCCCGTGAGAACAAATTCATCAGTGAAAGATTTCTAGTAAAGCTGAACAAAAATGGAGGGCCACAGAATCCTGAGAAAGTGGATAGACTCTGTACTCTTTTTATGGATTTGAGCACAAAGGATCTCAAAAAAGAGCTGTATATTGTTGCACACGTCATTAGAATTGGTCGTATGTTGCTAAATGACTCAAAGAAGGGCCCCCCACATGTACAGTACAGAAGACCATATGGCTGTGCTGCGCTGGCCATGAGTGATGTCTTCAGCTCCATCACAGACCCAAAAGAGGAGAAGGACTTTGTGCTAAAAATCTACACctGTAACAATGAAAGTGAGTGGTATCAGATCCATGAGAACATCATCCGAAAGTCTAGCACGAAATACTCAGCCCCAAGCACCAATTATGgtCTAATAGTATCTCTGCAGCTTTTCCGCGGTGATCTAGATGCCTTGCGAAGAGAAAACCAGACGCTGTTCAATGGGGCTGTGACTCTTACACGTAAACTTGGATTTCCTGATGTCATTCTACCAGGGGACAGCCGAAATGATATATATCTGACCCTTGAGCGTGGTGACTTTGAGAGAGGAGGGAAGAGCGTGCAGAAGAATATCGAGGTGACTGTGTACGTGCTGTATGCAGATGGAGAAACACTAAAAgatTGTATTAGTGTAGGCTGTGGAGAGCCGAATGTTAGTGAGCATTGCTCCTTTGTCCTGTATCACAATAACAGTCCTCGCTGGAGTGAAAGCCTCAAGCTGCCCATTCCTATTGAGCGCTTTCGTGGCTCGCACCTACGCTTCGAGTTCAGACATTGCTCTACTAAAGATAAAGGAGAGAAGAAGCTATTTGGTTTCTCTTTCACTCCACTCATGAGGGAAGATGGAACCACCTTAGGGGACGAGTGCCATGAGCTTTATGTGTATAagtgtgACGAGAACACAACATTTACTAATCAAGGCCTGTATTTGAGTATGCCATGCAGTAAGGCAGACCTAAACACCTGTCCTGCTATTCCAGCTTCATTTCCTTTCCAGCGCAGCAACAAGGAGAGTTTTTGCATCAGCACCATATTGGTTTCCACAAAGCTCACGCAGAatgTGGATCTTCTGACTCTGTTAAAATGGAAAGCTAATCCTGAGAGAGTTCTGGACGTCCTAGGCCGCCTACGAGTAATTAATGGGGAGGAAATTGTtaagTTTCTGCAGGATGTACTGGATACACTATTCTCTCTCCTTGATGACAACATTGACAAATATGGACCGCTTGTATTTCAGTCACTGGTGTTCATCATTAACCTGCTCAGGGATCCACGGTATTACCATTTTCGCCCGGTTATGGACGCCTACATACACAACCAGTTCGCAGGAGCGCTGGCCTACAAagaGCTGATCCGCTGTCTGAAGTGGTATATGGATCGCTCTGCTGAGGTTGTGCGACAGGACCACATTCAGGATGCTATGAGGGCACTGGAATACCTGTTTAAGTTTATCGTTCAGTCTCGGTCTCTGTACTCACGGGCTACGTGTGGCATGGAAGAGGAGCAGTTTAGAGCCAGCATTCATGAACTCTTCCAATCCATCCGTTTTCTGCTCAGCCTGGACGGACGAAATGCTGAGACACTTGTCTGCACACAGGCCACATTACTGACCAGTTTTCCAGACATCTTTGACGAGCTGCTGCAGATGTTCACAGTGCAGGAGGTGGCTGAGCTGGTGAGAGGGACGCTAGCGAGCATGCCCAGCACTGTAGACATTGGTCAGTCCATGGACGTGGTTAAACTCCAGTCAATCTCACGTACTGTGGACAGCAGGCTTTTCTACTTCCCAGAATCTCGGAGTATTTTGCTGCCTGTAGTACTACATCACATTCACCTACACttgagacagcagagagagctACTGCTGTGTGCCAAAATCCTGAGCAGCATCTTCTCCATCCTCAACACTAGTGCTCAgGAGTCTTTGTGTGTACAGGACGAGGTGGAGATGATGGTGGAGAGCTTATTAGATGTACTCCTGCAAACACTCTTATCCATCATGAGCAAGAGCCAGGCGGTGGAAAACAGCAGAAATCAGCGATGTCCCCAATGCACGGCTGAGATAACGGGCGAGTATGTGTCCTGTCTCCTGTCTCTATTGAAAATGATGTCTGAGCTGCATTTCCACCACCTGCTCAACAACTTTCACAGCAAAGATGAACTCAAGGAGTTTCTGCTAAAGATCTTCTGTGTGTTTCGAAATCTGATGAAACTTGGCGTGTTTCCACGAGACTGGAGTGCTATGCGGCTTCTCACCAGCCAGATTATTGTGATGACAACCCAATATCTGACTCCTGCACTTCACAAGAACTTCTCAGATGCAGACTTTGATTTTAAGctTTGGAACTCCTTCTTCAGTTTGGCTGTGCTGTTTATTAGTCAGCCCAGTCTGCAGCTTGAGTCACTCAGTCAGGTCAAGAGACAGCGGATAATGGACAAATACGGAGATCTGAGAGTGCAGATGGTGTATGAGCTATACAGTATGTGGCAGAAGCTAGGGGATAATAAGCCTCACTTCACCCCTGGGATGATGGGTCCATTCTTAGGAGTAACTCTGGTTCCTCAGGCTGAGGTCAGGAATGTTATGGTTCCCATTTTCCACGACATGATGGACTGGGAACAGCGCAAGAATGGCAACTTCAAACAGGTGGAGGCTGAGTTGATGGATAAGTTAGACAGTATGATAGCAGATGGGAAAGGAGAGAAAAACAGAGAACTCTTTGGATTATTAACCCAGCTCTTTGGACCATACCCAAGTCTGTTGGAGAAGATCGAGCAGGAGACATGGCGGGAGACAGGGGTGTCTTTCATCACTTCAGTCACACGCCTCATAGAGAGACTCCTGGATTACAGGGACAGTGTGAGAGGAGAAGAAGCAGAGAGTAAAAAGTTGGGAGCCAGCATCATGTGTGAGATAACCAAAGAAGACATGTACATCCGCTACATTCACAAACTCTGTGAACTCCACCTGCAGGTGCATAACTACACAGAGGCTGCTTTCACGTTGCTGTTGTATTGGGAGCTGCTGCAGTGGTGTGAGCAGCCCCTCCGGGACCTCCTACAGTACCCTGCTCAGAGTCAGTGGCAGCGCAAAGAGGCCCTCAGCAGAAAGATACTGCACTACTTCAACAAGGGCAAgtgttgggAGTATGGGATTTCTCTGTGCAGGGAACTGGCCCTTCAATATGAGATGTTATATGACTACCACAGCCTGAGCTGGATccggAAAATGGAGGCCAGTTTTTACGACAACATCATCGAGCAGCAGCGCCTGGAACCCGAGTTCTTTAGAATGGGCTTTTATGGACGCAAGTTTCCCTTTTTCTTGCGTaataaGGAGTTTGTGTGTCGAGGCTATGACTACGAGCGCCTAGAGGACTTTCAGCAGAGGATGCTCACTGAGTTCCCACAAGCTCTTGTTCTCCAACACCCCAACCAACCAGACGACAGCATTCAACAGAGTGATGCACAATaTCTTCAGATTTACGCTGTAACGCCAGTGTCAGAGCTCTCTGACGGCCCGATGATGGACAGGGTGCCTGAACGAATCAAGAGCTTCTACCGCATTAACAACGTCTCACGCTTCTACTACGATCGGCCCTTACACAAAGGGCccaaagacagagaaaatgagtTCAGgAGCTTGTGGATAGAGAGAACCACTCTGGTTTTGTGCCGTCCCTTGCCGGGTATTTCACGCTGGTTTGAGGTGGAGAGAAGGGAGGTGGTGGAGGTTAGTCCCCTGGAGAACGCCATATATGTTGTGGAGAATAAGAACCAGGAGCTGCGTTCTCTGATCAGCCAGTATCAGCAGCGGCATCACCACAGCAACGTCAATCTGCTCAGCATGTCTCTGAATGGCACGATCGATGCAGCCGTGAATGGAGGGATAGCGCGCTATCAGGAGGCATTTTTTGATAAAGACTACATCAGCAGTCACCCAGAAGAAATGGAAAGAATCAACCAGCTGAAGGAACTGATGCAGGAACAGGTTCACGTTCTGGGAGTTGGCTTGGCTGTGCATGAGAAGCTGGTGCATCCAGAAATGCGTCCCCTTCACAAAAAGTTGGTGGATCAATTCCACGTGATGAGGAGTGGTTTGTCTCATGGTGTTGCTGCGCTTGACAGGTTCTGTCCTTCAGGTATGAGGATCCTCCCACCAAGTCCTGAAAGTAACCGAATAATTCATAGACACAGTCCCTTGGGCTCTCTTCGTCTCCCCACATCACACCCCTCCACCAATGAGGGTGGGCCTTTGATGATTTTGACAGATGGGCTGATGGACCAACAAGATGATTCCCCTCTCATGCAGCCAAGCCCCTCATCCTCAAGCCTCAGCTCCATTCGCTCCTCTTCCTCACAGATGATAAACTCCGCCCCTTCTAGTGCAAGAGGATCTCCCTCTCTGTCCGATAAGAATAAGAATTCCCGTGAGCTGCTGATGTTGCTTCCTCCTCACAGAGAGAGACCTAACGCTATTTTTTATGGCAACAATGAAAACGGACAGATGAACAACCTTCAGCGCTCTGTGCTCCAACAGCACAGCCCCTGCAAACCATGTTCGGATCCCCACCCAGGCCTCACtgacagagGTGTTCCCCCAGCCCCCAGCAACTGGACTCTAGATGCAGAAGCTGGATCATACATGCAAAATCCGGGTACACTTACAATGCCCCATGGCTCTTCTCGCACCTTTCCACAGGGTCATTTCTTGATGCACTTTGACACATTCCAGCAGCATATGAGTGAGGCTCCGCCATCTTTGCCTGCACGCTCACTTAGAAAGtctcctcttcagccTATCCCAGGCTCTCCCACCAGCCCTGTGTCAGTTTTGGGTGGCAGTAACTCCACGCTTTCAGGTAGCGCCAGCAGTGGCGTCTCGTCCCTAAGCGAGAGTGTGCACAGCCATGCCGAAACACCGAGCCGTAATGAAAATGCCATCCTGAACCGCCATGACAATCCTATAGAAACTGCTCAGCTTCATTACTGGAGCCCTGACGATCACCTGAGCTCTCACTATCCGCATGTGCACTTCAGCGGTGTGCCTGAACACATGCCTTACTCCTCAGCCCCCAAGCATGCTCAGTATGGTCAAGGTCACTATGGAGCCTACAGCGCAGACAGCGAGCCAGTGGAGCCCCAGCGGCTGTGCCATCTGCGCCCGGCGGGTTTCAGTGCCATACAGGAGCAGTATCACCAACACCACCTGCACGGCTCATTACGCCGAGCCGGAACTCCAACTGTGCCACCTAAACCCGcccagagagaggaggagggggcAGCGCCACACCCGGTGCCCCTCCCACGCCGAATATTTCCTCCTCACCGTGCCACCTGGGAGCAGGGCATCAGAGAGGAGCAAGAGGAGAACGCAGGATGAAGACAGAAGAAGCCAGTGGCAGAGGGTGGTGGTAACAGAACGGTTCATCTAAGTGCTACGATCTTCAACCATGTGTTAAGCTGAACTGCATGTGCAGGTCATCCTGGTGATAGGAGGCTTTGTGTTGATGTTTCTTCTTTATAGTTTACATGACAGCAGCCTCTAGACCAGGACTTGCCTTGCACAGCAGACTCTAGAGACCATCAGACCATGCTTCAGCTTGCAGTATATGCTTACAAATCATACTCTGGTGTTAAAAATGTCTGTGAGCATGGTTTTTGtaccattttaaaagaaaatctataTTTTGTGAGTATAGTGAAGATATAATATAGACAATCCCTGTAGTCTCCTTGCTTAGTGTGGTCTTCTACAGTGATGAAAAGAAGAGGCCTTCCTCCTCAAGTGCAATGCTTCTAAACGACAGCACACCCCAGTCCGACTGCGCAATCATTCTCTCAGACCATGTAGATTCTAAATATTTCAGAGAATTCTGAACATTTCTGTCTGTACATATAGCATGGTCTAGCAAATGAAGTCCTAACTACAGACAAAAATATGCCATGGACTCTTGCTAGTAGTCTCAAGAAAAATCATTTCTTAgctttcaggtttttttaatcaaatgctcCCTTATCCGCTGTGTGTACCACAAATCTTTCCTTCCCATATTCCTTGTGGATGAATCCGACTACTTAGTGTAGTTGTAAATAGTGTACGCCCTTGTATTGgctacacaagcacacagaccTCTCATAAATAACTTCGTTCAGGAAGCTTTTGAATATGTCATATTGATTTTTAAGCATACCAACTAGCACTCAATACCTCTCCTAATAATGTGGCACACAGACTGCTGATTACAGTGAATTGTAATCTAGAAAGCTTTCGATCTGATAATGATTGAACTGGAGGGATTTAACCAGTTCTTACATGTCTGGCTTATTCAACAAGCATGGTAAATActaccttctttttttttttttttttttttttgctgatttatttctttcacAATCAGTTGACTTTATACCAAATTCTGTGTTATTTTACAAGGTCACTGGAAAGATCCCCCTCCAGTGCAGCCCTATTACTAATCAACATGCAGGTACAGAAGCTCAGGTGCGTTTTTGAGTATTAGATGCTAATGAGCATGGTGGCTACAGGGAAACCACACCAAAAAAGTACAATACACACTATCACAATGTACATTCAGTCACTgtacatacataataaaacagcctGGCGATACATGCTTTtgaataatcacacactctcaaagCTGTTGTGTCTTTGTTTCATGTACATAATCCAGAAGTGACATATGAAGATTATTGGAATTTCATATTTATACTGGGCAAGTTACAATAGCTTGTGATTGTCTCATTTGTTCTAGACTTGAGATATTaagtctgaagaaaaaaaaatcatttatactCTTTTCAATGTGCCCTCTTGTACATATCGTGAATGCATGAATAAACAGTGTTATGAATTTG

Function

NR:

description
PREDICTED: dedicator of cytokinesis protein 3-like isoform X1

GO: NA

KEGG:

id description
K05727 DOCK3; dedicator of cytokinesis protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925932.2 True 8322 mRNA 0.47 55 19862102 19928774

Neighbor

gene id symbol gene type direction distance location
bpifcl LOC108265236 coding upstream 106456 19730623 ~ 19755646 (+)
LOC113533240 slc32a1,LOC107564828,LOC104945949,LOC107735778 coding upstream 131578 19724022 ~ 19730524 (+)
stac3 stac3,LOC108265245,LOC108411943,LOC107751515,LOC105894341,LOC107711514 coding upstream 179475 19671421 ~ 19682627 (+)
map3k12 map3k12,LOC107715569,LOC107711606,LOC107663586 coding upstream 264046 19578002 ~ 19598056 (+)
LOC117597842 LOC108265174 coding upstream 359394 19501493 ~ 19502708 (+)
LOC113533168 LOC108265115 coding downstream 2605 19931379 ~ 19939003 (+)
bsna bsn,LOC108265177 coding downstream 122335 20051109 ~ 20171369 (+)
LOC113533362 apeh coding downstream 260026 20188800 ~ 20209345 (+)
tlr9 LOC108265704 coding downstream 280982 20209756 ~ 20215905 (+)
wnt5a wnt5a,LOC108411772,LOC107553896,LOC107693599,LOC107750813 coding downstream 526530 20455304 ~ 20467426 (+)
G135466 NA non-coding upstream 145123 19716637 ~ 19716979 (+)
G135393 NA non-coding upstream 157635 19704262 ~ 19704467 (+)
G135353 NA non-coding upstream 163363 19625304 ~ 19698739 (+)
G135352 NA non-coding upstream 234274 19619315 ~ 19627828 (+)
G135363 NA non-coding upstream 246445 19614875 ~ 19615657 (+)
G135524 NA non-coding downstream 76345 20005119 ~ 20005708 (+)
G135641 NA non-coding downstream 83793 20012567 ~ 20012767 (+)
G135643 LOC107737118 non-coding downstream 85748 20014522 ~ 20014770 (+)
G136057 NA non-coding downstream 1008349 20937123 ~ 20939070 (+)
G136056 NA non-coding downstream 1018530 20947304 ~ 20965468 (+)
G135287 LOC108265174 other upstream 359459 19487487 ~ 19502643 (+)
pbx3b pbx3,pbx3b,LOC108434408,LOC107550583,LOC107669256,LOC107555108 other upstream 1180170 18436185 ~ 18681932 (+)
vdac3 vdac3,LOC107754399,LOC107560056 other upstream 1813213 18030975 ~ 18048889 (+)
G134341 NA other upstream 2565219 17296111 ~ 17296883 (+)
gucd1 gucd1,LOC102792582 other upstream 2993334 16859976 ~ 16868768 (+)
LOC113533164 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 251994 20180768 ~ 20185618 (+)
LOC113533440 erc2,LOC108264953 other downstream 293641 20222415 ~ 20442191 (+)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other downstream 815806 20744580 ~ 20747856 (+)
LOC113533123 LOC108265628 other downstream 1852449 21781223 ~ 21797808 (+)
LOC113533434 creld1 other downstream 1896908 21825682 ~ 21859668 (+)

Expression


Co-expression Network