dok2 (LOC108265492)


Basic Information

Item Value
gene id dok2
gene name LOC108265492
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 29491293 ~ 29500672 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026945772.2
TGAAACAGAGCGACATGGAGGAGGATATTAGAAAGAAGGGTATGCTATATTTGCAGCAGCAAAGATTTGGAAAGAAGTGGAGAAAGGTGTGGTGTATTCTGTACCGAGAAAGCACCCGCTCGATCTCACGGCTAGAGTTTTTCGAGTGTAAAGATGGCGGGACTGGCACGTTGGAGAAATCCAAATGCAAGCAGGACAACAAAAAGATTATCAGACTGAGCGACTGCATTCGCGTGTCGGAGGCTGTGGAAGTGGACGGGTGCCCAAAGGACAGCAAGGCCTTCTTGGTGGAAACCACGGAGAAGACATTTGTCTTTGCTGTAGAAATGGCTGAAGTAGATGACTGGATGCAGAAACTGTGTGAAATTGCATTTCCTaTGAACCGGAGTGAAAGAGGGGCAGTGAGAAGGAACAGTTCACCCCCCGACTCTGAAGACGTCTCGATGACGGATAATTCGCTCTACTGTGggaaagaggctgcaCTGAAGGACTTCAAGGTGATAATTAGACGTACAGATGCTGCAGACAGGTGTGGGTTGAAAGGACAGTACTTGCTACGCACAGACTTTGACAGCCTGCTCCTCAAAGAGCCCAAGACAGGAGAAGTGCATTTCACCTGGCCATATCGGTACCTCCGTAGGTTTGGACGAGACAAGACAACATTCTCTTTCGAGGCTGGAAGAAGGTGCGACTCCGGTGAAGGCAACTTTGAGTTTGACACCAAGCAAGGCAACGCCATTTTCCAGTATGTGGAAGCTGCCATTAACTTACAGAGAGCAGGTTTTTCACAGCAACAGTCTTCAAGCGGTGCTCGAGATACTTTACCTATGCCACAGCCGCCCAAAATCAATCCACCCACTGAGGACAGTTCCTGTACCATTTACAGCATGCTGAGCGAAACAGCTATGAAGGACAAAGCCAAACAATTATCGCCCCATCGTACCAGACTGGAAATGCCTGCAGATAAACACCTGACTGGGGTTAAGAGTTTAAACCTTGACACACGGCCTCTGCCAAGAAAGAACCAGGTCAAGAACTTCCGAAGCTGTCCTTTAGCCAACACGGAGAACGATGCCTATTCCCGGGTCACGGCACCACTTTCAGACAAAGAGATTCCAGACAGAGTTGAGCAAGAAGAGCAACACCAAATGCTTCGTCCTTGTTCCAGTTCCCCAGATTCGGAGTATTCACTTCCGTTCGACAACGTTGCCAAGAACATCATGATGGACATCTTGACATCATCACATTTGGCACCACCAATGGTAGTGGAACCTTGTTTGAGTAATGAAAATAAGGACAGTAATGAAAAGAGTGCGGAACCACTTTATGATAGCATTGATGAGTTTGCCATCAGATCTTTCCCACAAAAACCCAAAAGACATTCAAATAAATACCCTGCTGTGGAACACATTTATGATGAACCCGAAGGCTGTGCCACGACGCCTCATGCTCCAACGGCACTCTACGACGACCCCGAAGAGGTCAGGTGTAACGCGTGGAAGACCCTGGGTGCTTTAACTGATCCGAGTGGACACGAGTTCCCTTATAATGCACATGTGGATGACTACGCAGTTCCCAAACCTCCTAGGAGAGCCAGAATTccagagcaggagagagagagagagagaaaagcaagatGCCAGGAATACAGAACACGACTGAAGATGACGAGGACTCTTCACCATATGATAATGtgatgctgaaaatgaaaactaCTTCTCTAAATGAATAACCGGGACATCTTTTATCTGTCTGtgaaagtctttaaaaaataagGCAAGTCATAtgtgaagaaataaacaaaattcatCACTATATTTTACTTCAATTTTATGACTGTGGGTATAAAAGGACACTGAACAAAAGAACACTCATGAAAGTTTtaatgtgtaaggaataaatcatgacGTGAAGTGGA

Function

NR:

description
docking protein 2 isoform X2

GO: NA

KEGG:

id description
K20234 DOK2; docking protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026945772.2 True 1918 mRNA 0.46 7 29491293 29500672

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_4 NA coding upstream 1106 29490115 ~ 29490187 (+)
trnag-ccc_2 NA coding upstream 1703 29489520 ~ 29489590 (+)
trnar-ucg_3 NA coding upstream 1879 29489342 ~ 29489414 (+)
trnar-ucg_2 NA coding upstream 2672 29488549 ~ 29488621 (+)
trnag-ccc_1 NA coding upstream 3250 29487973 ~ 29488043 (+)
gfra2a LOC108264921 coding downstream 123468 29624140 ~ 29696031 (+)
lzts1 LOC108264908 coding downstream 287789 29788461 ~ 29799944 (+)
msi1b msi1,LOC107687968,LOC107712472 coding downstream 319831 29820503 ~ 29844470 (+)
prkab1b aakb1 coding downstream 377687 29878359 ~ 29887355 (+)
LOC113546087 LOC108264941,LOC108412053 coding downstream 398785 29899457 ~ 29903243 (+)
G140935 NA non-coding upstream 69999 29420880 ~ 29421294 (+)
G140910 NA non-coding upstream 193496 29297050 ~ 29297797 (+)
G140884 NA non-coding upstream 244977 29239482 ~ 29246316 (+)
G140830 NA non-coding upstream 325087 29158731 ~ 29166206 (+)
G140765 NA non-coding upstream 851556 28638119 ~ 28639737 (+)
G140943 NA non-coding downstream 3011 29503683 ~ 29504872 (+)
G141242 NA non-coding downstream 419060 29919732 ~ 29937740 (+)
G141247 NA non-coding downstream 436836 29937508 ~ 29954068 (+)
G141235 NA non-coding downstream 449186 29949858 ~ 29968041 (+)
G141236 asphd2 non-coding downstream 464095 29964767 ~ 30022919 (+)
LOC117597881 LOC108265326 other upstream 139531 29325934 ~ 29351762 (+)
slc7a4 slc7a4 other upstream 688119 28748834 ~ 28803174 (+)
arpc5la arpc5la,LOC108265305,LOC108411248,LOC107571143,LOC107753090,LOC107550963,LOC107676626 other upstream 1463843 28019184 ~ 28027450 (+)
dbnlb dbnl other upstream 1631591 27838245 ~ 27859702 (+)
G139781 NA other upstream 2061816 27428727 ~ 27429477 (+)
LOC113546008 LOC108264940,LOC108412050 other downstream 359516 29860188 ~ 29876280 (+)
LOC113546064 hps4 other downstream 402841 29903513 ~ 29929070 (+)
G141234 hps4 other downstream 409357 29910029 ~ 29929154 (+)
ggt5a LOC108264907 other downstream 528189 30028861 ~ 30040856 (+)

Expression


Co-expression Network