ipo11 (ipo11)


Basic Information

Item Value
gene id ipo11
gene name ipo11
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 112 ~ 20638 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034306289.1
AGTTACGGTGAAGCTCTGTGCAGGTCTTTCTGTGAATTCCTCAAGGACATTACAGCCGAGGGACAAGTGCAAGTGCTCAAgGTGGTGGAGATTGCACTGAAAGTGAGTCCAGTTCTGGCATCTCACATGTTCCAGGCTCTCCTGCCCGCTGTGTTCAGAGGAGTGATAGAGGGAGAGaggtaCCCTGTGGTGATGTCGACGTATCTGGGTATAATTGGTCGCATACTCCTGCAGAACTCCAGCTTCTTCTCTTCACTGCTCACCCAGATGGCCATGGAGTTCAACCAGgagccggAGCAGCTGTTGGGGAACTTGATGGAGATGTGGGTGGACAGGATGGACAACATCACACAGCCTGAGAGGAGGAAACTGTCATCTTTAGCTCTGCTCTCCTTATTACCTTCAGATAACACtgttgtACAGGAGAAGTTCTGTGGGATTGTTAATATCTGTGTCGAGTCTCTACACGATGTGATGACTGAAGATCCGGAGACAGGGACCTTCAaagacTGTATGTTGGTGAGTGAAGCGGAGGAGCCGAAGTTCTCTGATGATGAAGAACCTCCCACTGAGCAGGACAAGAGGAGGAAACTGctgGCTCTGGAGGACCCGGTACACACAGTGTctctgcagcagtgtgtgtatgagaagcTGAAGCTGCAGCAGGGGATGATGGGAGATCAGGGCTTCCAGGCTCTCATGGAGACGGTGGACACGGAGATCATCCACCAGCTGCAGGAGTTTCTACACGgactgtaaccatagcaacggcaaacaaacatcacatcacagtcgtcacacacacacccacacacccacacacacacacacacgtcacacacgtcacacacacgtcacatgtAACCGTCGCTGCTCCATGTTCCCTGCACGGTGCATTACTGTGACTCGGACAGTGAGTtatttgcagtgcattgtgggattttctGCGCTATGCAGTGAGTCACATGTGACAGTAGTGTGCTTCCCCagtagtgcactaggtagtgAATAGGGGGCAGTGGATTAGTGATTAGCTTTAATGACTTCAGGAAAGTTTAGAGTTTAGAACCAAAACGTTTTTCtttcaatatttcttttttttttttttttt

Function

symbol description
ipo11 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO11 (importin 11).

NR:

description
importin-11

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034306289.1 True 1111 mRNA 0.49 7 112 20638

Neighbor

gene id symbol gene type direction distance location
LOC117597813 NA coding downstream 195523 216161 ~ 217382 (+)
LOC117597814 NA coding downstream 240761 261399 ~ 264259 (+)
fpgt fpgt coding downstream 314265 334903 ~ 341086 (+)
tnni3k tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107710912,LOC102789447 coding downstream 322024 342662 ~ 366781 (+)
prkcz LOC108265357,LOC108415018,LOC108250564 coding downstream 390351 410989 ~ 456088 (+)
G124385 NA non-coding downstream 25 20663 ~ 28910 (+)
G124397 NA non-coding downstream 23110 43748 ~ 43957 (+)
G124398 NA non-coding downstream 26682 47320 ~ 47548 (+)
G124400 NA non-coding downstream 32210 52848 ~ 54183 (+)
LOC117597791 NA non-coding downstream 33648 54286 ~ 57248 (+)
G124399 NA other downstream 28340 48978 ~ 51072 (+)
G124403 NA other downstream 49435 70073 ~ 86083 (+)
G124442 NA other downstream 157024 177662 ~ 178417 (+)
G124462 NA other downstream 251779 272417 ~ 330399 (+)
G124498 NA other downstream 379118 399756 ~ 407434 (+)

Expression


Co-expression Network