LOC113533362 (apeh)


Basic Information

Item Value
gene id LOC113533362
gene name apeh
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 20188800 ~ 20209345 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034306640.1
GGTatgtgacttttattttgacagagCGGAAATTTACTAGGAAGTAAGATTAGATAATGTGGGTATTGTTGCTGATTAACCAAAGTGTATTTTCAGTCTGTTCACCTAAGATAAAATTGCTAGTATTTTCTTTAGTGACAAGCATTGTTAATAAACTTTGAAAAATATAAGGAAGACATCAGTGAGAACAGAAAGGAGTCTCAGCGGTGACATGGATTTGAAGgTAAGCAGCCCTAAGGAGATCGCTAAGCTCTACCGGGAGCAGAGTCACTTCTCATCCCTGAGCCGTGCCGACGTAGGACCGGTGATCACGTCTCAGTATGGAGGAAAATACAACAACATCTCCACAGagtgGACTCAGCGGGATCTGGAGAGGAATGAGATTGTTACATTTTGCCGGCAGTACATCGTGTTTCATGATGACAAATTGATAGTCTACTCCGGGCCTTCTGGTAACTGCACAGAGATCAAGGGAGAGCTGCTGAGCCAGGACTCTCCTTCTGGAGAAATGAAGGCTGTAGTGAGGGAGTGTTCCATTAAAGGAGAGGAGAAACAGTTTCTTGAGATCTGGCATAAGAACAGTAAGATAAAAAGTCTCAACCTGACTGCACTGAAAAAGCATGGAAAGGTGTATGAGGATGAACAGTTTGGCTGCCTGGTCTGGTCTCACTCTGAGACTCATCTCCtttatgtggctgagaaaaagCGTCCCAAGGCAGAGTCCTACTTCCAGTCCGAGTCTGAATCCGGTTTGCTTGGTGATGATGAGGACGTAATAAAGGCTGGGAAGCAGGAGGATACTGTCAAGgGTAACCAGTTTGTTTATTATGAGGACTGGGGTGAGGCTTTGGTCAGTAAGAGCACCCCGACACTTTGTATTTTGGATATTGAGGGCAACAATGTTTCTGTCTTGGAGGGAGTACCAGAGGATATTTCTCCTGGACAgGCATTCTGGGCACCTAATGACACAGGCGTGGTGTTTGTGGGATGGTCACACGAGCCATTCAGACTGGGCCTGAAACACTGCCCCAATAgacgGTCTTCTCTCTTTTATGTGGATCTCACTGGTGGAAAATGTGAAAAGTTGTCTGACTCCACCGCAGTCTGCTCTCCTCGTCTGAGTCCAGATCACTGCCGCATTGTCTATTTTGAGTGTGATGTGTATGGCCCACATCAACAATGCAACAAGCTCTGCATGTATGACTGGTATACAAAGAAGACGTCAGTGGTAGTTGATGTGGTCAAGAGAGGCAGAGAagATGGCTTTACTGGTATCTACAGCTCCATGCTGTCTCATCAGTGCTGGTCAGCTGACAGCCAGAGAGTTCTTATATCATCTCCTCAGAGAAGCCGTAAggacattctaGTGGTTGATACTTCCACAGGCCAAGTTACATCTCTTACCTCTAaGTCAGACATGGGAAGTTGGAGCCTGCTGACTATCCACAGGGATTTGATGGTGGTCAGCTGCTCATCTCCAAACTGTCCTCCAAGTCtgAGGGTGGGCTTTCTGCCAGCAAGTGGTTCAGAAGAAGAGGTGTCATGGGTGACACTAGAGGACGCTCAAATGCAGCCTGAAATTGACTGGCAGATTCTTACTTTCACCCCACCTCCAGAGGAGGACAACAAACAATACCCTGGTCTGGACTTTGAAGCCATTCTGCTGAAACCAAAAGATGTGAAAGAGGGAACAAAACTACCAGTCATTGTCAAGCCACATGGTGGACCTCACTCTGTAATAGTGACAGAGTGGCTCTTAAGCTCAGCAGTTCTCTGCAGGATGGGTTTTGGTGTCTTACATGTTAATTACAGAGGCTCTCTTGGGTACGGGCAGGACAGCATCTTCTCCCTGCCtggaaatattggcacccaGGATGTCAAAGATGTCCAGTTTGCTGTTGAGAGCATTTTAAAGCGAGGCGACTTCGACAGAGAGAAGGTTGCTGTTATTGGGGGCTCCCATGGAGGATTCTTGGCTTGTCACCTAATTGGTCAATACCcagacttttacaaagcatgtGTTGTTCTGAATCCAGTCACCAACCTGGCATCCATGATTGGCAGTACTGACATTCCTGACTGGTGTACGGTGGAAGCTGGGTGTGATTATAACACTAACACCATGCTGAGCTCTTCTATGTTGGAGCAAATGTTAAACAAGTCACCCATCAAACATGTCACACAGGTAAAGGCTCCTGTGCTGCTTACCTTGGGAGCGAAAGATAAGCGTGTGCCTAATAAGCAGGGCATCGAGTACTACAAAGCTCTGAAGGCTTTGCAAGTACCTGTCAGgtTGTTATGGTATCCAGGTAACAACCATTCTTTGTCCAAAGTTGATGCAGAATCAGATGGATTTATGAACATTGCGCTGTGGATCATCCAGCATCTCAATCTATAATCACCAGAGATGATGTAATATACTTATAATGGCcttacatatttaaatgaaaatataggCGATCTGAAACACCAATCTGTTGTTGGGTCATTGAGGTTTATTTGATAACTATGAAAAGTAAGGATGTTAACTTGGAGTGTCTCCTTCAGGTTGTTAGAATGCAAACCTTAAACTAAATTGTGTTGGTACACTAATGTTTTACTTGAAGTTTAAAACAGACTGATCTAAATAAGGAACTTGAAACTACACTAGACACAGCGGTGTATTCCAGCCATTATTTTGTGGCTGCTTTTACAAATGATCTTTGCCGCTATCAattattgctctctctctctttttttaaatggaaatccATCTCTTAAAAAGGTTGTTACCAGAGCATCAATGGTTCTTTCTTCTGTCAACGTTTGATACACTCTGGA

Function

symbol description
apeh Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in pronephric duct and pronephric mesoderm. Orthologous to human APEH (acylaminoacyl-peptide hydrolase).

NR:

description
PREDICTED: acylamino-acid-releasing enzyme isoform X2

GO: NA

KEGG:

id description
K01303 APEH; acylaminoacyl-peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034306640.1 True 2820 mRNA 0.45 23 20188800 20209345

Neighbor

gene id symbol gene type direction distance location
bsna bsn,LOC108265177 coding upstream 17431 20051109 ~ 20171369 (+)
LOC113533168 LOC108265115 coding upstream 249797 19931379 ~ 19939003 (+)
LOC113533655 LOC108266029,LOC108434414 coding upstream 260026 19862102 ~ 19928774 (+)
bpifcl LOC108265236 coding upstream 433154 19730623 ~ 19755646 (+)
LOC113533240 slc32a1,LOC107564828,LOC104945949,LOC107735778 coding upstream 458276 19724022 ~ 19730524 (+)
tlr9 LOC108265704 coding downstream 411 20209756 ~ 20215905 (+)
wnt5a wnt5a,LOC108411772,LOC107553896,LOC107693599,LOC107750813 coding downstream 245959 20455304 ~ 20467426 (+)
LOC113533338 lrtm1 coding downstream 337960 20547305 ~ 20560196 (+)
parapinopsina LOC100304471,LOC108411942 coding downstream 495155 20704500 ~ 20733204 (+)
trnae-cuc_20 NA coding downstream 523055 20732400 ~ 20732471 (+)
G135643 LOC107737118 non-coding upstream 174030 20014522 ~ 20014770 (+)
G135641 NA non-coding upstream 176033 20012567 ~ 20012767 (+)
G135524 NA non-coding upstream 183092 20005119 ~ 20005708 (+)
G135466 NA non-coding upstream 471821 19716637 ~ 19716979 (+)
G135393 NA non-coding upstream 484333 19704262 ~ 19704467 (+)
G136057 NA non-coding downstream 727778 20937123 ~ 20939070 (+)
G136056 NA non-coding downstream 737959 20947304 ~ 20965468 (+)
G136429 NA non-coding downstream 1137500 21346845 ~ 21347161 (+)
G136433 NA non-coding downstream 1151494 21360839 ~ 21361880 (+)
G136466 NA non-coding downstream 1465513 21674858 ~ 21693702 (+)
LOC113533164 abracl,LOC107727609,LOC107558932,LOC107553474 other upstream 3182 20180768 ~ 20185618 (+)
LOC113533656 gnas,LOC108261582,LOC108265241,LOC108434415,LOC104936173,LOC102796627 other upstream 286433 19825798 ~ 19902367 (+)
G135287 LOC108265174 other upstream 686157 19487487 ~ 19502643 (+)
pbx3b pbx3,pbx3b,LOC108434408,LOC107550583,LOC107669256,LOC107555108 other upstream 1506868 18436185 ~ 18681932 (+)
vdac3 vdac3,LOC107754399,LOC107560056 other upstream 2139911 18030975 ~ 18048889 (+)
LOC113533440 erc2,LOC108264953 other downstream 13070 20222415 ~ 20442191 (+)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other downstream 535235 20744580 ~ 20747856 (+)
LOC113533123 LOC108265628 other downstream 1571878 21781223 ~ 21797808 (+)
LOC113533434 creld1 other downstream 1616337 21825682 ~ 21859668 (+)
LOC113533283 rbsn other downstream 1883250 22092595 ~ 22123751 (+)

Expression


Co-expression Network