G173748


Basic Information

Item Value
gene id G173748
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 568813 ~ 570326 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205686
tctgtgagtcagtgagtctgtgaatctgtgagtcagtgtgtctgtgaatctgtgagtcagtgagtctgtgaatctgtgagtcagtgagtctgtgagtcagtgtatctgtgagtctgtgagtcagtgtgtctgtgaatctgtgagtcagtgaatctgtgagtcagtgagtcagtgtatctgtgagtctgtgaatctgtgagtcagtgaatctgtgtgtctgtgagtctgtgagtcacagggactcgtacagcagacACTCCGGTAATAACAGACAAAATAatctttgatgtggtgaagttttcggtaaggagacgtttatgtaacatcgatggaaggagtctccagtgtcagcgctttgtaacagtcagaggtgaagctgtaactgtaagttttccgacatcttcaggacagaggagtttacgcttcttctttgcggtttctcagtaacatgcggaacaagctgcgattttttatcttattaacttgaagagagagaataaagaggctggtgagggaacgagtgtttatagctgctataacgtaagcgacaacaggaactaactcgtttcatgaacagtaaatgtaactataaatggataaaaagtctttaattaataaaacattgtaattgttggtaagtcgctgtggtgtaagaggaatagaacactagggaacgtgctgttagaggaaaataatcagcttcagggtggaaacagtaactccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggagtgtttattactgttatattaACAACATGTTTATTAAACGTGATGCTGACGTAACAGCGCCGCGTCTCGTCCTCCGTCTCACGTGAGCACAGAGGTTTTGAAAAGCACCATGTTTTGGTTTACAGGAAGTGAGCTGAGTGCGCGCTGCTCTGTGCTGCTGCAGATGGAGCTGCAGATGGAGCTGGAGATGGAGCTGCAGATGGAGATGCAGATGGagctggagatggagatggagatggagctgcagatggagatggagatggagctgcagatgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205686 True 1064 TUCP 0.45 3 568813 570326

Neighbor

gene id symbol gene type direction distance location
tub tub,LOC107754678,LOC107585948,LOC106562367,LOC106587536 coding upstream 305753 201128 ~ 263060 (+)
rras2 rras2,LOC106676223,LOC103139496 coding upstream 374322 155529 ~ 194491 (+)
copb1 copb1 coding upstream 428241 119795 ~ 140572 (+)
LOC113536444 cyp2r1,LOC108271345,LOC108429106,LOC107750548,LOC107688167,LOC107585944 coding upstream 527709 37138 ~ 41104 (+)
slc7a6os slc7a6os coding downstream 73493 643819 ~ 647035 (+)
LOC117598424 NA coding downstream 175637 745963 ~ 758953 (+)
dok4 dok4,LOC106587148 coding downstream 281981 852307 ~ 894448 (+)
dnaaf1 NA coding downstream 325821 896147 ~ 908435 (+)
cog4 gfod2,cog4,LOC107741389,LOC107700400,LOC107750533,LOC107674430 coding downstream 342714 913040 ~ 930102 (+)
G173725 NA non-coding upstream 32512 535550 ~ 536301 (+)
G173724 NA non-coding upstream 33882 533175 ~ 534931 (+)
G173679 NA non-coding upstream 120863 447690 ~ 447950 (+)
G173662 NA non-coding upstream 233059 335028 ~ 335754 (+)
G173543 NA non-coding upstream 304900 263366 ~ 263913 (+)
G173749 NA non-coding downstream 2162 572488 ~ 572792 (+)
G173752 NA non-coding downstream 15130 585456 ~ 586133 (+)
G173756 NA non-coding downstream 22403 592729 ~ 593644 (+)
G173758 NA non-coding downstream 24485 594811 ~ 596679 (+)
G173769 NA non-coding downstream 43139 613465 ~ 613977 (+)
G173819 NA other downstream 171695 742021 ~ 742710 (+)
ccdc102a ccdc102a,LOC106587147,LOC107594240,LOC102775569,LOC107081377,LOC103376291,LOC106562045 other downstream 220048 790374 ~ 822723 (+)
G173898 NA other downstream 791456 1361782 ~ 1364931 (+)
G174536 NA other downstream 1488644 2058970 ~ 2060283 (+)
G174546 NA other downstream 1507751 2078077 ~ 2078627 (+)

Expression


Co-expression Network