G173819


Basic Information

Item Value
gene id G173819
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 742021 ~ 742710 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205778
CTGAGAGGAAGAGTGCAGGACATGGGGAACCTGCTCTGTGAGACTCACAGGGAGTGTGACCAGCTAACGAACgaacGTGACCGAGAGCGGGAGGCTCACAGCATCCTCCAGACGGAGAACGATGAGCTGAAGAAGACTCTGATGCACAAGGACGAGTTCCTGAAGGTCTCCCTGACTGAAGCAGTGGAGAAACATCAGAAGGCTGTGGAGACCATTGCTCAGCTGGAGGCTGAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205778 True 238 TUCP 0.54 3 742021 742710

Neighbor

gene id symbol gene type direction distance location
slc7a6os slc7a6os coding upstream 94986 643819 ~ 647035 (+)
tub tub,LOC107754678,LOC107585948,LOC106562367,LOC106587536 coding upstream 478961 201128 ~ 263060 (+)
rras2 rras2,LOC106676223,LOC103139496 coding upstream 547530 155529 ~ 194491 (+)
copb1 copb1 coding upstream 601449 119795 ~ 140572 (+)
LOC113536444 cyp2r1,LOC108271345,LOC108429106,LOC107750548,LOC107688167,LOC107585944 coding upstream 700917 37138 ~ 41104 (+)
LOC117598424 NA coding downstream 3253 745963 ~ 758953 (+)
dok4 dok4,LOC106587148 coding downstream 109597 852307 ~ 894448 (+)
dnaaf1 NA coding downstream 153437 896147 ~ 908435 (+)
cog4 gfod2,cog4,LOC107741389,LOC107700400,LOC107750533,LOC107674430 coding downstream 170330 913040 ~ 930102 (+)
cenpt cenpt coding downstream 193634 936344 ~ 948304 (+)
G173761 NA non-coding upstream 2514 687350 ~ 739507 (+)
G173769 NA non-coding upstream 128044 613465 ~ 613977 (+)
G173758 NA non-coding upstream 145342 594811 ~ 596679 (+)
G173756 NA non-coding upstream 148377 592729 ~ 593644 (+)
G173752 NA non-coding upstream 155888 585456 ~ 586133 (+)
G173821 NA non-coding downstream 19494 762204 ~ 790257 (+)
G173823 NA non-coding downstream 21630 764340 ~ 820140 (+)
G173854 NA non-coding downstream 166929 909639 ~ 910317 (+)
G173865 NA non-coding downstream 281777 1024487 ~ 1025616 (+)
G173880 NA non-coding downstream 391308 1134018 ~ 1134612 (+)
G173748 NA other upstream 171695 568813 ~ 570326 (+)
ccdc102a ccdc102a,LOC106587147,LOC107594240,LOC102775569,LOC107081377,LOC103376291,LOC106562045 other downstream 47664 790374 ~ 822723 (+)
G173898 NA other downstream 619072 1361782 ~ 1364931 (+)
G174536 NA other downstream 1316260 2058970 ~ 2060283 (+)
G174546 NA other downstream 1335367 2078077 ~ 2078627 (+)
pth1b NA other downstream 2903033 3645743 ~ 3647115 (+)

Expression


Co-expression Network