Gene
RNA
| Item | Value |
|---|---|
| gene id | G179485 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 10574536 ~ 10576032 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU212349 | True | 1284 | lncRNA | 0.41 | 2 | 10574536 | 10576032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rnf13 | rnf13 | coding | downstream | 19338 | 10544767 ~ 10555198 (-) |
| LOC113536710 | NA | coding | downstream | 44165 | 10527033 ~ 10530371 (-) |
| adamtsl3 | adamtsl3,LOC107591308,LOC107736989,LOC107685222,LOC107662271 | coding | downstream | 121765 | 10258307 ~ 10452771 (-) |
| efl1 | efl1,eftud1 | coding | downstream | 323196 | 10114083 ~ 10251340 (-) |
| mex3b | mex3b,mex3d,LOC100534722,LOC107596262,LOC101483145,LOC102192827 | coding | downstream | 501226 | 10068517 ~ 10073310 (-) |
| LOC113536758 | LOC108270621,LOC108410683,LOC101070468,LOC103028064 | coding | upstream | 4661 | 10580693 ~ 10592964 (-) |
| LOC113536600 | NA | coding | upstream | 18640 | 10594672 ~ 10597238 (-) |
| nmur1a | LOC108270657 | coding | upstream | 47257 | 10623289 ~ 10635357 (-) |
| hykk.2 | hykk | coding | upstream | 62989 | 10639021 ~ 10644194 (-) |
| mfsd8l1 | LOC108271204 | coding | upstream | 520095 | 11096127 ~ 11108565 (-) |
| G179478 | NA | non-coding | downstream | 11084 | 10561403 ~ 10563452 (-) |
| G179469 | NA | non-coding | downstream | 59335 | 10514696 ~ 10515201 (-) |
| G179466 | NA | non-coding | downstream | 62512 | 10511621 ~ 10512024 (-) |
| G179372 | NA | non-coding | downstream | 462294 | 10112028 ~ 10112242 (-) |
| G179021 | mesdc1,LOC107709503,LOC107591291,LOC107691577,LOC107662264,LOC107553753 | non-coding | downstream | 800127 | 9770818 ~ 9774409 (-) |
| G179487 | NA | non-coding | upstream | 2388 | 10578420 ~ 10579460 (-) |
| G179727 | NA | non-coding | upstream | 618405 | 11194437 ~ 11195673 (-) |
| G179827 | ttc14 | non-coding | upstream | 982887 | 11558919 ~ 11562343 (-) |
| G179972 | NA | non-coding | upstream | 1152245 | 11728277 ~ 11777745 (-) |
| G180111 | NA | non-coding | upstream | 1420138 | 11996170 ~ 11996383 (-) |
| sh3gl3a | sh3gl3a,LOC108271217,LOC108439633,LOC107709492,LOC107685195,LOC107591296 | other | downstream | 50957 | 10486735 ~ 10523579 (-) |
| G179035 | NA | other | downstream | 759311 | 9813892 ~ 9815225 (-) |
| G178942 | NA | other | downstream | 1051206 | 9522416 ~ 9523330 (-) |
| LOC113536412 | NA | other | downstream | 1167318 | 9387491 ~ 9407218 (-) |
| mthfs | mthfs,LOC102796869 | other | downstream | 1238350 | 9320966 ~ 9336186 (-) |
| LOC113536673 | NA | other | upstream | 29479 | 10605511 ~ 10695119 (-) |
| nppc | anfc4 | other | upstream | 667815 | 11243847 ~ 11246310 (-) |
| G179803 | ncl | other | upstream | 833060 | 11409092 ~ 11420046 (-) |
| LOC117598430 | NA | other | upstream | 915675 | 11491707 ~ 11503962 (-) |
| LOC113536577 | NA | other | upstream | 934814 | 11510846 ~ 11518394 (-) |
